RiceENCODE: A comprehensive epigenomic database as a rice Encyclopedia of DNA Elements

A quantitative genomics map of rice provides genetic insights and guides breeding

(2021) Xin Wei et al.   NATURE GENETICS

eRice: a refined epigenomic platform for japonica and indica rice

(2020) Pingxian Zhang et al.   PLANT BIOTECHNOLOGY JOURNAL

Integrative analysis of reference epigenomes in 20 rice varieties

(2020) Lun Zhao et al.   Nature Communications

WashU Epigenome Browser update 2019

(2019) Daofeng Li et al.   NUCLEIC ACIDS RESEARCH

Chromatin loops associated with active genes and heterochromatin shape rice genome architecture for transcriptional regulation

(2019) Lun Zhao et al.   Nature Communications

Rice Information GateWay: A Comprehensive Bioinformatics Platform for Indica Rice Genomes

(2018) Jia-Ming Song et al.   Molecular Plant

PCSD: a plant chromatin state database

(2017) Yue Liu et al.   NUCLEIC ACIDS RESEARCH

Analysis of Chromatin Regulators Reveals Specific Features of Rice DNA Methylation Pathways

(2016) Feng Tan et al.   PLANT PHYSIOLOGY

miRBase: annotating high confidence microRNAs using deep sequencing data

(2013) Ana Kozomara et al.   NUCLEIC ACIDS RESEARCH

Integrative epigenomic mapping defines four main chromatin states in Arabidopsis

(2011) François Roudier et al.   EMBO JOURNAL