4.7 Article

Phase separation property of a hydrophobic deep eutectic solvent-water binary mixture: A molecular dynamics simulation study

Journal

JOURNAL OF CHEMICAL PHYSICS
Volume 154, Issue 24, Pages -

Publisher

AIP Publishing
DOI: 10.1063/5.0052200

Keywords

-

Funding

  1. MHRD

Ask authors/readers for more resources

Deep eutectic solvents have been used in numerous fields as greener alternatives to conventional organic solvents. A hydrophobic DES composed of a 1:1 mixture of oleic acid and lidocaine possesses a unique phase separation property in water, which can be used for dye extraction from aqueous solutions.
Over the past decade, deep eutectic solvents (DESs) have earned applicability in numerous fields as non-flammable, non-volatile, and greener alternatives to conventional organic solvents. In a first of its kind, a hydrophobic DES composed of a 1:1 mixture of oleic acid and lidocaine was recently reported, possessing a lower critical solution temperature in water. The thermoreversible phase property of this DES-water system was utilized to sequester out dye molecules from their aqueous solutions. In this article, we explore the phase separation phenomena for this particular DES in its aqueous solution using an all-atom molecular dynamics simulation. A 50 wt. % solution of the DES in water was studied at three different temperatures (253, 293, and 313 K) to understand the various molecular interactions that dictate the phase segregation property of these systems. In this work, we have elaborated on the importance of hydrogen bonding interactions and the non-bonding interactions between the components and the competition between the two that leads to phase separation. Overall, we observe that the increase in unfavorable interaction between the DES components and water with increasing temperature determines the phase separation behavior. We have also studied the modification in the dynamical properties of water molecules close to the phase boundary. Such molecular insights would be beneficial for designing novel solvent systems that can be used as extraction-based media in industries. Published under an exclusive license by AIP Publishing.

Authors

I am an author on this paper
Click your name to claim this paper and add it to your profile.

Reviews

Primary Rating

4.7
Not enough ratings

Secondary Ratings

Novelty
-
Significance
-
Scientific rigor
-
Rate this paper

Recommended

Article Chemistry, Medicinal

Inhibition of A? 16-22 Peptide Aggregation by Small Molecules and Their Permeation through POPC Lipid Bilayer: Insight from Molecular Dynamics Simulation Study

Rabindranath Paul, Siddhartha Bera, Madhusmita Devi, Sandip Paul

Summary: Alzheimer's Disease is a neurodegenerative disorder without effective therapeutic treatment. This study investigated the inhibitory effect of an indanone-carbamate-based molecule on Afi16-22 peptide aggregation. The results showed that the inhibitor molecules interacted with the peptide and destabilized its arranged conformer. Additionally, the study examined the effect of inhibitors on amyloid aggregation and their permeability through lipid bilayers.

JOURNAL OF CHEMICAL INFORMATION AND MODELING (2022)

Article Chemistry, Physical

Illustrating the Effect of Small Molecules Derived from Natural Resources on Amyloid Peptides

Rituparna Roy, Sandip Paul

Summary: The misfolding and aggregation of proteins are associated with the onset of amyloidogenic diseases. Currently, there is no effective treatment available for these chronic degenerative diseases. However, targeting the aggregation of disease-specific proteins shows promise as a new approach for treatment. In recent years, significant progress has been made in generating potential drug candidates, including small molecules, polymers, and nanoparticles. Natural small molecular probes derived from natural sources have been particularly interesting as amyloid inhibitors. This review summarizes important natural small molecular probes that can inhibit the aggregation of A beta, hIAPP, and alpha-syn peptides and discusses how their efficacy and preference vary with their structure and conformation, providing insights for the design of novel drug candidates for the treatment of amyloid diseases.

JOURNAL OF PHYSICAL CHEMISTRY B (2023)

Article Chemistry, Physical

Elucidating the Hydrotropic Mechanism of the Antagonistic Salt PPh4Cl

Aritra Mitra, Krishna Gopal Chattaraj, Sandip Paul

Summary: PPh4Cl is a potential hydrotropic agent that assists in the solubility of dye molecules. Molecular dynamics simulations reveal that dye molecules aggregate into clusters, causing the accumulation of PPh4+ ions in their vicinity and exclusion of water molecules. The preferential interaction between dye molecules and PPh4Cl, attributed to the difference in ir-ir and CH-ir interaction, plays a crucial role in the structural organization. The low propensity of PPh4Cl for cluster formation enhances its hydrotropic behavior. The thermodynamically favored process of dye dissolution occurs through a cooperative mechanism, providing insights for the design of novel hydrotropes.

JOURNAL OF PHYSICAL CHEMISTRY B (2023)

Article Chemistry, Physical

Influence of salt and temperature on the self-assembly of cyclic peptides in water: a molecular dynamics study

Rimjhim Moral, Sandip Paul

Summary: It has been observed in literature that cyclic peptides can self-assemble in water to form cyclic peptide nanotubes, making them valuable in nanotechnology. This study aimed to investigate the influence of temperature and salt concentration on the self-assembly behavior of cyclic peptides. Molecular dynamics simulations were performed at different temperatures and in the presence of NaCl. The results showed that salt concentration and temperature both had significant effects on the association propensity of cyclic peptides. Low NaCl concentration and low temperature hindered the self-assembly, while high NaCl concentration and low temperature facilitated it.

PHYSICAL CHEMISTRY CHEMICAL PHYSICS (2023)

Review Chemistry, Multidisciplinary

Hydrophobic Deep Eutectic Solvents as Greener Substitutes for Conventional Extraction Media: Examples and Techniques

Madhusmita Devi, Rimjhim Moral, Sanjib Thakuria, Aritra Mitra, Sandip Paul

Summary: Deep eutectic solvents (DESs) are a type of multicomponent designer solvents that remain stable as liquids over a wide range of temperatures. Most DESs formulated before are hydrophilic and dissolve when in contact with water, but hydrophobic DESs (HDESs) have been developed as an alternative. HDESs can induce phase segregation in an aqueous solution and can be used as extracting mediums for various compounds. This review discusses the usage of HDESs for extraction, including organic compounds, metal ions, and gases like CO2, along with the techniques employed in the extraction processes.

ACS OMEGA (2023)

Article Nanoscience & Nanotechnology

In Silico Investigation on the Selective Nanotoxicity of Two-Dimensional Materials to Hen Egg White Lysozyme Protein

Srijita Paul, Titas Kumar Mukhopadhyay, Sandip Paul

Summary: Inspired by the urge to determine the underlying mechanism of toxic effects induced by two-dimensional nanomaterials, this study investigates the interactions between graphene, h-BN, and a model protein HEWL. It is found that the protein can be easily adsorbed on both graphene and h-BN, but h-BN exhibits a stronger adsorption affinity. Aromatic and aliphatic residues play a significant role in the adsorption process. The disruption of intraprotein hydrogen bonds by h-BN leads to changes in the protein's secondary structure. The study highlights the importance of understanding nanotoxicity for the design of biocompatible 2D materials.

ACS APPLIED NANO MATERIALS (2023)

Article Chemistry, Physical

Exploring the Curvature-Dependence of Boron Nitride Nanoparticles on the Inhibition of hIAPP Aggregation

Rituparna Roy, Sandip Paul

Summary: Nanoparticles, especially boron nitride nanoparticles, have shown potential in anti-aggregation research and have become a new frontier in the development of drugs against human amyloid diseases. The curvature of nanoparticles also plays a significant role in their interaction with amyloid peptides.

JOURNAL OF PHYSICAL CHEMISTRY B (2023)

Article Chemistry, Physical

Pathways of hLL-3717-29 Aggregation Give Insight into the Mechanism of a-Amyloid Formation

Aritra Mitra, Sandip Paul

Summary: This study reveals the aggregation pathways of alpha-amyloids in hLL-37(17-29) using molecular dynamics simulations. Larger oligomers are found to be formed through the association of smaller and intermediate oligomers. The peptides retain their helical structure during aggregation with transient occurrences of 3-10 helix and turns. Hydrophobic interactions play a vital role in the aggregation of these peptides.

JOURNAL OF PHYSICAL CHEMISTRY B (2023)

Article Chemistry, Physical

Elucidating the Hydrotropic Mechanism of the Antagonistic Salt PPh4Cl

Aritra Mitra, Krishna Gopal Chattaraj, Sandip Paul

Summary: PPh4Cl is a promising hydrotropic agent and its solubility-assisting mechanism for dye molecules was investigated using molecular dynamics simulations. The research revealed that dye molecules aggregate into clusters, leading to the accumulation of PPh4+ ions around them and exclusion of water molecules. This structural organization is attributed to the preferential interaction between dye molecules and PPh4Cl, which arises from differences in Jr-Jr and CH-Jr interactions. The low propensity for cluster formation indicated by the hydrodynamic radius of PPh4Cl enhances its hydrotropic behavior. The dissolution of dye molecules occurs cooperatively and is thermodynamically favored. These findings provide valuable molecular insights for the design of novel hydrotropes with enhanced solubilizing properties.

JOURNAL OF PHYSICAL CHEMISTRY B (2023)

Article Chemistry, Physical

Illustrating the Effect of Small Molecules Derived from Natural Resources on Amyloid Peptides

Rituparna Roy, Sandip Paul

Summary: The onset of amyloidogenic diseases is caused by the misfolding and aggregation of proteins. There is currently no effective treatment for these chronic degenerative diseases. However, targeting the aggregation of disease-specific proteins shows promise as a new approach. Recent progress has been made in generating potential drug candidates that can inhibit protein aggregation, including small molecules derived from natural sources. Understanding the factors that affect the binding efficacy and preference of these small molecules can guide the future design of novel drugs for amyloid diseases.

JOURNAL OF PHYSICAL CHEMISTRY B (2023)

Article Chemistry, Physical

The chaotropic effect of ions on the self-aggregating propensity of Whitlock's molecular tweezers

Madhusmita Devi, Sandip Paul

Summary: The addition of aluminum salt solutions, especially ClO4- and SCN- ions at high concentrations, weakens the self-aggregation tendency of molecular tweezers, thus improving their therapeutic effect.

PHYSICAL CHEMISTRY CHEMICAL PHYSICS (2022)

No Data Available