Petrobactin, a siderophore produced by Alteromonas, mediates community iron acquisition in the global ocean

Latitudinal constraints on the abundance and activity of the cyanobacterium UCYN‐A and other marine diazotrophs in the North Pacific

(2020) Mary R. Gradoville et al.   LIMNOLOGY AND OCEANOGRAPHY

Microbial feedbacks optimize ocean iron availability

(2020) Jonathan Maitland Lauderdale et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Re-epithelialization and immune cell behaviour in an ex vivo human skin model

(2020) Ana Rakita et al.   Scientific Reports

Transcriptomic Study of Substrate-Specific Transport Mechanisms for Iron and Carbon in the Marine Copiotroph Alteromonas macleodii

(2020) Lauren E. Manck et al.   mSystems

Dynamic proteome response of a marine Vibrio to a gradient of iron and ferrioxamine bioavailability

(2020) Julia M. Gauglitz et al.   MARINE CHEMISTRY

Why microbes secrete molecules to modify their environment: the case of iron-chelating siderophores

(2019) Gabriel E. Leventhal et al.   Journal of the Royal Society Interface

Microbial iron metabolism as revealed by gene expression profiles in contrasted Southern Ocean regimes

(2019) Pavla Debeljak et al.   ENVIRONMENTAL MICROBIOLOGY

Reduction-dependent siderophore assimilation in a model pennate diatom

(2019) Tyler H. Coale et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The interplay between regeneration and scavenging fluxes drives ocean iron cycling

(2019) Alessandro Tagliabue et al.   Nature Communications

Assessment of leaching protocols to determine the solubility of trace metals in aerosols

(2019) Morgane M.G. Perron et al.   TALANTA

The purple non-sulfur bacterium Rhodopseudomonas palustris produces novel petrobactin-related siderophores under aerobic and anaerobic conditions

(2018) Oliver Baars et al.   ENVIRONMENTAL MICROBIOLOGY

Structural absorption by barbule microstructures of super black bird of paradise feathers

(2018) Dakota E. McCoy et al.   Nature Communications

The reconstruction of 2,631 draft metagenome-assembled genomes from the global oceans

(2018) Benjamin J. Tully et al.   Scientific Data

Endocytosis-mediated siderophore uptake as a strategy for Fe acquisition in diatoms

(2018) Elena Kazamia et al.   Science Advances

The Biogeochemistry of Electroactive Humic Substances and Its Connection to Iron Chemistry in the North East Atlantic and the Western Mediterranean Sea

(2018) Gabriel Dulaquais et al.   JOURNAL OF GEOPHYSICAL RESEARCH-OCEANS

Patterns of iron and siderophore distributions across the California Current System

(2018) Rene M. Boiteau et al.   LIMNOLOGY AND OCEANOGRAPHY

The integral role of iron in ocean biogeochemistry

(2017) Alessandro Tagliabue et al.   NATURE

Biotic and abiotic retention, recycling and remineralization of metals in the ocean

(2017) Philip W. Boyd et al.   Nature Geoscience

Iron persistence in a distal hydrothermal plume supported by dissolved–particulate exchange

(2017) Jessica N. Fitzsimmons et al.   Nature Geoscience

BinSanity: unsupervised clustering of environmental microbial assemblies using coverage and affinity propagation

(2017) Elaina D. Graham et al.   PeerJ

Direct Heme Uptake by Phytoplankton-Associated Roseobacter Bacteria

(2017) Shane L. Hogle et al.   mSystems

An integrated metagenomics pipeline for strain profiling reveals novel patterns of bacterial transmission and biogeography

(2016) Stephen Nayfach et al.   GENOME RESEARCH

Polyamines in Eukaryotes, Bacteria, and Archaea

(2016) Anthony J. Michael   JOURNAL OF BIOLOGICAL CHEMISTRY

Siderophore-based microbial adaptations to iron scarcity across the eastern Pacific Ocean

(2016) Rene M. Boiteau et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genetic Manipulation of Competition for Nitrate between Heterotrophic Bacteria and Diatoms

(2016) Rachel E. Diner et al.   Frontiers in Microbiology

CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes

(2015) Donovan H. Parks et al.   GENOME RESEARCH

Iron-binding ligands and humic substances in the San Francisco Bay estuary and estuarine-influenced shelf regions of coastal California

(2015) Randelle M. Bundy et al.   MARINE CHEMISTRY

Modeling organic iron-binding ligands in a three-dimensional biogeochemical ocean model

(2015) Christoph Völker et al.   MARINE CHEMISTRY

Basin-scale transport of hydrothermal dissolved metals across the South Pacific Ocean

(2015) Joseph A. Resing et al.   NATURE

Structure and function of the global ocean microbiome

(2015) S. Sunagawa et al.   SCIENCE

Open science resources for the discovery and analysis of Tara Oceans data

(2015) Stéphane Pesant et al.   Scientific Data

ChelomEx: Isotope-Assisted Discovery of Metal Chelates in Complex Media Using High-Resolution LC-MS

(2014) Oliver Baars et al.   ANALYTICAL CHEMISTRY

The impact of different external sources of iron on the global carbon cycle

(2014) Alessandro Tagliabue et al.   GEOPHYSICAL RESEARCH LETTERS

Effects of iron limitation on growth and carbon metabolism in oceanic and coastal heterotrophic bacteria

(2014) Marion Fourquez et al.   LIMNOLOGY AND OCEANOGRAPHY

Distinct pools of dissolved iron-binding ligands in the surface and benthic boundary layer of the California Current

(2014) Randelle M. Bundy et al.   LIMNOLOGY AND OCEANOGRAPHY

Distal transport of dissolved hydrothermal iron in the deep South Pacific Ocean

(2014) Jessica N. Fitzsimmons et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Single bacterial strain capable of significant contribution to carbon cycling in the surface ocean

(2014) B. E. Pedler et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Siderophore-promoted dissolution of smectite by fluorescentPseudomonas

(2014) Claire Ferret et al.   Environmental Microbiology Reports

featureCounts: an efficient general purpose program for assigning sequence reads to genomic features

(2013) Y. Liao et al.   BIOINFORMATICS

Detection of photoactive siderophore biosynthetic genes in the marine environment

(2013) Astrid Gärdes et al.   BIOMETALS

Functional and Structural Analysis of the Siderophore Synthetase AsbB through Reconstitution of the Petrobactin Biosynthetic Pathway fromBacillus anthracis

(2012) Tyler D. Nusca et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Public good dynamics drive evolution of iron acquisition strategies in natural bacterioplankton populations

(2012) O. X. Cordero et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genomes of surface isolates of Alteromonas macleodii: the life of a widespread marine opportunistic copiotroph

(2012) Mario López-Pérez et al.   Scientific Reports

Iron transporters in marine prokaryotic genomes and metagenomes

(2011) Brian M. Hopkinson et al.   ENVIRONMENTAL MICROBIOLOGY

Transcriptional responses of surface water marine microbial assemblages to deep-sea water amendment

(2011) Yanmei Shi et al.   ENVIRONMENTAL MICROBIOLOGY

Evidence for geochemical control of iron by humic substances in seawater

(2011) Luis M. Laglera et al.   LIMNOLOGY AND OCEANOGRAPHY

Production of siderophore type chelates in Atlantic Ocean waters enriched with different carbon and nitrogen sources

(2011) Edward Mawji et al.   MARINE CHEMISTRY

Metal flux from hydrothermal vents increased by organic complexation

(2011) Sylvia G. Sander et al.   Nature Geoscience

Accelerated Profile HMM Searches

(2011) Sean R. Eddy   PLoS Computational Biology

Prodigal: prokaryotic gene recognition and translation initiation site identification

(2010) Doug Hyatt et al.   BMC BIOINFORMATICS

Evidence for Strong but Dynamic Iron−Humic Colloidal Associations in Humic-Rich Coastal Waters

(2010) Silvia Batchelli et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

The biogeochemical cycle of iron in the ocean

(2010) P. W. Boyd et al.   Nature Geoscience

Microbial community transcriptomes reveal microbes and metabolic pathways associated with dissolved organic matter turnover in the sea

(2010) J. McCarren et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Size and composition of colloidal organic matter and trace elements in the Mississippi River, Pearl River and the northern Gulf of Mexico, as characterized by flow field-flow fractionation

(2009) Björn Stolpe et al.   MARINE CHEMISTRY

Enzymatic assembly of DNA molecules up to several hundred kilobases

(2009) Daniel G Gibson et al.   NATURE METHODS

Chemistry of Marine Ligands and Siderophores

(2008) Julia M. Vraspir et al.   Annual Review of Marine Science

The Missing Link in Petrobactin Biosynthesis:asbFEncodes a (−)-3-Dehydroshikimate Dehydratase†

(2008) David T. Fox et al.   BIOCHEMISTRY

The distribution and stabilisation of dissolved Fe in deep-sea hydrothermal plumes

(2008) Sarah A. Bennett et al.   EARTH AND PLANETARY SCIENCE LETTERS

Characterization and acid-mobilization study of iron-containing mineral dust source materials

(2008) David M. Cwiertny et al.   JOURNAL OF GEOPHYSICAL RESEARCH

Bacterial carbon processing by generalist species in the coastal ocean

(2008) Xiaozhen Mou et al.   NATURE