piRNA‐ and siRNA‐mediated transcriptional repression in Drosophila , mice, and yeast: new insights and biodiversity
Published 2021 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
piRNA‐ and siRNA‐mediated transcriptional repression in
Drosophila
, mice, and yeast: new insights and biodiversity
Authors
Keywords
-
Journal
EMBO REPORTS
Volume -, Issue -, Pages -
Publisher
EMBO
Online
2021-08-04
DOI
10.15252/embr.202153062
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Molecular principles of Piwi-mediated cotranscriptional silencing through the dimeric SFiNX complex
- (2021) Jakob Schnabl et al. GENES & DEVELOPMENT
- Dimerisation of the PICTS complex via LC8/Cut-up drives co-transcriptional transposon silencing in Drosophila
- (2021) Evelyn L Eastwood et al. eLife
- Emerging Features of Linear Motif-Binding Hub Proteins
- (2020) Nathan Jespersen et al. TRENDS IN BIOCHEMICAL SCIENCES
- Crystal structure of Drosophila Piwi
- (2020) Sonomi Yamaguchi et al. Nature Communications
- The piRNA pathway in planarian flatworms: new model, new insights
- (2020) Iana V. Kim et al. BIOLOGICAL CHEMISTRY
- TEX15 associates with MILI and silences transposable elements in male germ cells
- (2020) Fang Yang et al. GENES & DEVELOPMENT
- A satellite repeat-derived piRNA controls embryonic development of Aedes
- (2020) Rebecca Halbach et al. NATURE
- SPOCD1 is an essential executor of piRNA-directed de novo DNA methylation
- (2020) Ansgar Zoch et al. NATURE
- The evolutionarily conserved piRNA-producing locus pi6 is required for male mouse fertility
- (2020) Pei-Hsuan Wu et al. NATURE GENETICS
- miR2118-dependent U-rich phasiRNA production in rice anther wall development
- (2020) Saori Araki et al. Nature Communications
- The Mi-2 nucleosome remodeler and the Rpd3 histone deacetylase are involved in piRNA-guided heterochromatin formation
- (2020) Bruno Mugat et al. Nature Communications
- TEX15 is an essential executor of MIWI2-directed transposon DNA methylation and silencing
- (2020) Theresa Schöpp et al. Nature Communications
- Comprehensive structure-function characterization of DNMT3B and DNMT3A reveals distinctive de novo DNA methylation mechanisms
- (2020) Linfeng Gao et al. Nature Communications
- NSD1-deposited H3K36me2 directs de novo methylation in the mouse male germline and counteracts Polycomb-associated silencing
- (2020) Kenjiro Shirane et al. NATURE GENETICS
- Piwi suppresses transcription of Brahma-dependent transposons via Maelstrom in ovarian somatic cells
- (2020) Ryo Onishi et al. Science Advances
- Requirements for multivalent Yb body assembly in transposon silencing in Drosophila
- (2019) Shigeki Hirakata et al. EMBO REPORTS
- Daedalus and Gasz recruit Armitage to mitochondria, bringing piRNA precursors to the biogenesis machinery
- (2019) Marzia Munafò et al. GENES & DEVELOPMENT
- The RNA-Binding ATPase, Armitage, Couples piRNA Amplification in Nuage to Phased piRNA Production on Mitochondria
- (2019) Daniel Tianfang Ge et al. MOLECULAR CELL
- SETD2 regulates the maternal epigenome, genomic imprinting and embryonic development
- (2019) Qianhua Xu et al. NATURE GENETICS
- Distinct and Collaborative Functions of Yb and Armitage in Transposon-Targeting piRNA Biogenesis
- (2019) Hirotsugu Ishizu et al. Cell Reports
- piRNA-guided co-transcriptional silencing coopts nuclear export factors
- (2019) Martin H Fabry et al. eLife
- Nuclear RNA export factor variant initiates piRNA‐guided co‐transcriptional silencing
- (2019) Kensaku Murano et al. EMBO JOURNAL
- A Pandas complex adapted for piRNA-guided transcriptional silencing and heterochromatin formation
- (2019) Kang Zhao et al. NATURE CELL BIOLOGY
- The nascent RNA binding complex SFiNX licenses piRNA-guided heterochromatin formation
- (2019) Julia Batki et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Essential roles of Windei and nuclear monoubiquitination of Eggless/ SETDB 1 in transposon silencing
- (2019) Ken Osumi et al. EMBO REPORTS
- A Translation-Activating Function of MIWI/piRNA during Mouse Spermiogenesis
- (2019) Peng Dai et al. CELL
- Armitage determines Piwi−piRISC processing from precursor formation and quality control to inter‐organelle translocation
- (2019) Haruna Yamashiro et al. EMBO REPORTS
- Su(var)2-10 and the SUMO Pathway Link piRNA-Guided Target Recognition to Chromatin Silencing
- (2019) Maria Ninova et al. MOLECULAR CELL
- Two distinct transcriptional controls triggered by nuclear Piwi-piRISCs in the Drosophila piRNA pathway
- (2018) Kaoru Sato et al. CURRENT OPINION IN STRUCTURAL BIOLOGY
- Mouse GTSF1 is an essential factor for secondary piRNA biogenesis
- (2018) Takuji Yoshimura et al. EMBO REPORTS
- Piwi Nuclear Localization and Its Regulatory Mechanism in Drosophila Ovarian Somatic Cells
- (2018) Ryu Yashiro et al. Cell Reports
- piRNA-Guided Genome Defense: From Biogenesis to Silencing
- (2018) Benjamin Czech et al. Annual Review of Genetics
- Maelstrom Represses Canonical Polymerase II Transcription within Bi-directional piRNA Clusters in Drosophila melanogaster
- (2018) Timothy H. Chang et al. MOLECULAR CELL
- PIWI-interacting RNAs: small RNAs with big functions
- (2018) Deniz M. Ozata et al. NATURE REVIEWS GENETICS
- DNMT3L facilitates DNA methylation partly by maintaining DNMT3A stability in mouse embryonic stem cells
- (2018) Nicolas Veland et al. NUCLEIC ACIDS RESEARCH
- Relationship between PIWIL4-Mediated H3K4me2 Demethylation and piRNA-Dependent DNA Methylation
- (2018) Ippei Nagamori et al. Cell Reports
- Structural Foundations of RNA Silencing by Argonaute
- (2017) Jessica Sheu-Gruttadauria et al. JOURNAL OF MOLECULAR BIOLOGY
- The Histone Acetyltransferase Mst2 Protects Active Chromatin from Epigenetic Silencing by Acetylating the Ubiquitin Ligase Brl1
- (2017) Valentin Flury et al. MOLECULAR CELL
- A heterochromatin-dependent transcription machinery drives piRNA expression
- (2017) Peter Refsing Andersen et al. NATURE
- Piwi interacts with chromatin at nuclear pores and promiscuously binds nuclear transcripts in Drosophila ovarian somatic cells
- (2017) Artem A. Ilyin et al. NUCLEIC ACIDS RESEARCH
- H3K14ac is linked to methylation of H3K9 by the triple Tudor domain of SETDB1
- (2017) Renata Z. Jurkowska et al. Nature Communications
- Recruitment of Armitage and Yb to a transcript triggers its phased processing into primary piRNAs in Drosophila ovaries
- (2017) Radha Raman Pandey et al. PLoS Genetics
- piRNA biogenesis in the germline: From transcription of piRNA genomic sources to piRNA maturation
- (2016) Shigeki Hirakata et al. Biochimica et Biophysica Acta-Gene Regulatory Mechanisms
- Inheritance of a Nuclear PIWI from Pluripotent Stem Cells by Somatic Descendants Ensures Differentiation by Silencing Transposons in Planarian
- (2016) Norito Shibata et al. DEVELOPMENTAL CELL
- Loss ofl(3)mbtleads to acquisition of the ping-pong cycle inDrosophilaovarian somatic cells
- (2016) Tetsutaro Sumiyoshi et al. GENES & DEVELOPMENT
- Piwi Modulates Chromatin Accessibility by Regulating Multiple Factors Including Histone H1 to Repress Transposons
- (2016) Yuka W. Iwasaki et al. MOLECULAR CELL
- The DNA methyltransferase DNMT3C protects male germ cells from transposon activity
- (2016) Joan Barau et al. SCIENCE
- MIWI2 as an Effector of DNA Methylation and Gene Silencing in Embryonic Male Germ Cells
- (2016) Kanako Kojima-Kita et al. Cell Reports
- PIWI-Interacting RNA: Its Biogenesis and Functions
- (2015) Yuka W. Iwasaki et al. Annual Review of Biochemistry
- DNA methylation and gene expression dynamics during spermatogonial stem cell differentiation in the early postnatal mouse testis
- (2015) Naoki Kubo et al. BMC GENOMICS
- Pitfalls of Mapping High-Throughput Sequencing Data to Repetitive Sequences: Piwi’s Genomic Targets Still Not Identified
- (2015) Georgi K. Marinov et al. DEVELOPMENTAL CELL
- Reassessment of Piwi Binding to the Genome and Piwi Impact on RNA Polymerase II Distribution
- (2015) Haifan Lin et al. DEVELOPMENTAL CELL
- Dynamic changes in histone modifications precede de novo DNA methylation in oocytes
- (2015) Kathleen R. Stewart et al. GENES & DEVELOPMENT
- Silencio/CG9754 connects the Piwi–piRNA complex to the cellular heterochromatin machinery
- (2015) Grzegorz Sienski et al. GENES & DEVELOPMENT
- Slicing and Binding by Ago3 or Aub Trigger Piwi-Bound piRNA Production by Distinct Mechanisms
- (2015) Wei Wang et al. MOLECULAR CELL
- The Paf1 complex represses small-RNA-mediated epigenetic gene silencing
- (2015) Katarzyna Maria Kowalik et al. NATURE
- The expanding world of small RNAs in plants
- (2015) Filipe Borges et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- piRNA-guided slicing specifies transcripts for Zucchini-dependent, phased piRNA biogenesis
- (2015) F. Mohn et al. SCIENCE
- piRNA-guided transposon cleavage initiates Zucchini-dependent, phased piRNA production
- (2015) B. W. Han et al. SCIENCE
- Panoramix enforces piRNA-dependent cotranscriptional silencing
- (2015) Y. Yu et al. SCIENCE
- Somatic Primary piRNA Biogenesis Driven by cis-Acting RNA Elements and trans-Acting Yb
- (2015) Hirotsugu Ishizu et al. Cell Reports
- The Rhino-Deadlock-Cutoff Complex Licenses Noncanonical Transcription of Dual-Strand piRNA Clusters in Drosophila
- (2014) Fabio Mohn et al. CELL
- The HP1 Homolog Rhino Anchors a Nuclear Complex that Suppresses piRNA Precursor Splicing
- (2014) Zhao Zhang et al. CELL
- Reduced pachytene piRNAs and translation underlie spermiogenic arrest in Maelstrom mutant mice
- (2014) J. Castaneda et al. EMBO JOURNAL
- Setdb1is required for germline development and silencing of H3K9me3-marked endogenous retroviruses in primordial germ cells
- (2014) Sheng Liu et al. GENES & DEVELOPMENT
- Two waves of de novo methylation during mouse germ cell development
- (2014) A. Molaro et al. GENES & DEVELOPMENT
- piRNA pathway targets active LINE1 elements to establish the repressive H3K9me3 mark in germ cells
- (2014) D. Pezic et al. GENES & DEVELOPMENT
- Transgenerationally inherited piRNAs trigger piRNA biogenesis by changing the chromatin of piRNA clusters and inducing precursor processing
- (2014) Adrien Le Thomas et al. GENES & DEVELOPMENT
- Retrotransposons and pseudogenes regulate mRNAs and lncRNAs via the piRNA pathway in the germline
- (2014) Toshiaki Watanabe et al. GENOME RESEARCH
- MORC1 represses transposable elements in the mouse male germline
- (2014) William A. Pastor et al. Nature Communications
- Yb Integrates piRNA Intermediates and Processing Factors into Perinuclear Bodies to Enhance piRISC Assembly
- (2014) Yukiko Murota et al. Cell Reports
- piRNA clusters and open chromatin structure
- (2014) Soichiro Yamanaka et al. Mobile DNA
- A Major Epigenetic Programming Mechanism Guided by piRNAs
- (2013) Xiao A. Huang et al. DEVELOPMENTAL CELL
- DmGTSF1 is necessary for Piwi-piRISC-mediated transcriptional transposon silencing in the Drosophila ovary
- (2013) H. Ohtani et al. GENES & DEVELOPMENT
- Drosophila Gtsf1 is an essential component of the Piwi-mediated transcriptional silencing complex
- (2013) D. Donertas et al. GENES & DEVELOPMENT
- High-resolution DNA methylome analysis of primordial germ cells identifies gender-specific reprogramming in mice
- (2013) H. Kobayashi et al. GENOME RESEARCH
- A Genome-wide RNAi Screen Draws a Genetic Framework for Transposon Control and Primary piRNA Biogenesis in Drosophila
- (2013) Felix Muerdter et al. MOLECULAR CELL
- The Genetic Makeup of the Drosophila piRNA Pathway
- (2013) Dominik Handler et al. MOLECULAR CELL
- A Transcriptome-wide RNAi Screen in the Drosophila Ovary Reveals Factors of the Germline piRNA Pathway
- (2013) Benjamin Czech et al. MOLECULAR CELL
- HDAC-mediated suppression of histone turnover promotes epigenetic stability of heterochromatin
- (2013) Ozan Aygün et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Function of Piwi, a nuclear Piwi/Argonaute protein, is independent of its slicer activity
- (2013) Nicole Darricarrère et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Transcriptional Silencing of Transposons by Piwi and Maelstrom and Its Impact on Chromatin State and Gene Expression
- (2012) Grzegorz Sienski et al. CELL
- A Role for Neuronal piRNAs in the Epigenetic Control of Memory-Related Synaptic Plasticity
- (2012) Priyamvada Rajasethupathy et al. CELL
- The Dynamics of Genome-wide DNA Methylation Reprogramming in Mouse Primordial Germ Cells
- (2012) Stefanie Seisenberger et al. MOLECULAR CELL
- RNAi triggered by specialized machinery silences developmental genes and retrotransposons
- (2012) Soichiro Yamanaka et al. NATURE
- Structure and function of Zucchini endoribonuclease in piRNA biogenesis
- (2012) Hiroshi Nishimasu et al. NATURE
- The structural biochemistry of Zucchini implicates it as a nuclease in piRNA biogenesis
- (2012) Jonathan J. Ipsaro et al. NATURE
- A systematic analysis ofDrosophilaTUDOR domain-containing proteins identifies Vreteno and the Tdrd12 family as essential primary piRNA pathway factors
- (2011) Dominik Handler et al. EMBO JOURNAL
- Maelstrom coordinates microtubule organization during Drosophila oogenesis through interaction with components of the MTOC
- (2011) K. Sato et al. GENES & DEVELOPMENT
- Chromodomain-Mediated Oligomerization of HP1 Suggests a Nucleosome-Bridging Mechanism for Heterochromatin Assembly
- (2011) Daniele Canzio et al. MOLECULAR CELL
- Asf1/HIRA Facilitate Global Histone Deacetylation and Associate with HP1 to Promote Nucleosome Occupancy at Heterochromatic Loci
- (2011) Kenichi Yamane et al. MOLECULAR CELL
- The endonuclease activity of Mili fuels piRNA amplification that silences LINE1 elements
- (2011) Serena De Fazio et al. NATURE
- The Chp1–Tas3 core is a multifunctional platform critical for gene silencing by RITS
- (2011) Thomas Schalch et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Defects in RNA quality control factors reveal RNAi-independent nucleation of heterochromatin
- (2011) Francisca E Reyes-Turcu et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Drosophila Piwi functions downstream of piRNA production mediating a chromatin-based transposon silencing mechanism in female germ line
- (2011) S. H. Wang et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Separation of stem cell maintenance and transposon silencing functions of Piwi protein
- (2011) M. S. Klenov et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Stc1: A Critical Link between RNAi and Chromatin Modification Required for Heterochromatin Integrity
- (2010) Elizabeth H. Bayne et al. CELL
- An in vivo RNAi assay identifies major genetic and cellular requirements for primary piRNA biogenesis in Drosophila
- (2010) Daniel Olivieri et al. EMBO JOURNAL
- Roles for the Yb body components Armitage and Yb in primary piRNA biogenesis in Drosophila
- (2010) K. Saito et al. GENES & DEVELOPMENT
- Combinatorial, site-specific requirement for heterochromatic silencing factors in the elimination of nucleosome-free regions
- (2010) J. F. Garcia et al. GENES & DEVELOPMENT
- Genome-wide erasure of DNA methylation in mouse primordial germ cells is affected by AID deficiency
- (2010) Christian Popp et al. NATURE
- Mouse MOV10L1 associates with Piwi proteins and is an essential component of the Piwi-interacting RNA (piRNA) pathway
- (2010) K. Zheng et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The TDRD9-MIWI2 Complex Is Essential for piRNA-Mediated Retrotransposon Silencing in the Mouse Male Germline
- (2009) Masanobu Shoji et al. DEVELOPMENTAL CELL
- dMec: a novel Mi-2 chromatin remodelling complex involved in transcriptional repression
- (2009) Natascha Kunert et al. EMBO JOURNAL
- Abundant primary piRNAs, endo-siRNAs, and microRNAs in a Drosophila ovary cell line
- (2009) N. C. Lau et al. GENOME RESEARCH
- piRNAs mediate posttranscriptional retroelement silencing and localization to pi-bodies in theDrosophilagermline
- (2009) Ai Khim Lim et al. JOURNAL OF CELL BIOLOGY
- An Alpha Motif at Tas3 C Terminus Mediates RITS cis Spreading and Promotes Heterochromatic Gene Silencing
- (2009) Haitao Li et al. MOLECULAR CELL
- High-Affinity Binding of Chp1 Chromodomain to K9 Methylated Histone H3 Is Required to Establish Centromeric Heterochromatin
- (2009) Thomas Schalch et al. MOLECULAR CELL
- A regulatory circuit for piwi by the large Maf gene traffic jam in Drosophila
- (2009) Kuniaki Saito et al. NATURE
- Biogenesis of small RNAs in animals
- (2009) V. Narry Kim et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Diverse roles of HP1 proteins in heterochromatin assembly and functions in fission yeast
- (2009) T. Fischer et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- RNA Interference Guides Histone Modification during the S Phase of Chromosomal Replication
- (2008) Anna Kloc et al. CURRENT BIOLOGY
- Mouse Maelstrom, a Component of Nuage, Is Essential for Spermatogenesis and Transposon Repression in Meiosis
- (2008) Sarah F.C. Soper et al. DEVELOPMENTAL CELL
- DNA methylation of retrotransposon genes is regulated by Piwi family members MILI and MIWI2 in murine fetal testes
- (2008) S. Kuramochi-Miyagawa et al. GENES & DEVELOPMENT
- HP1 Proteins Form Distinct Complexes and Mediate Heterochromatic Gene Silencing by Nonoverlapping Mechanisms
- (2008) Mohammad R. Motamedi et al. MOLECULAR CELL
- A piRNA Pathway Primed by Individual Transposons Is Linked to De Novo DNA Methylation in Mice
- (2008) Alexei A. Aravin et al. MOLECULAR CELL
- Drosophila endogenous small RNAs bind to Argonaute 2 in somatic cells
- (2008) Yoshinori Kawamura et al. NATURE
- Structure of an argonaute silencing complex with a seed-containing guide DNA and target RNA duplex
- (2008) Yanli Wang et al. NATURE
- Cell cycle control of centromeric repeat transcription and heterochromatin assembly
- (2008) Ee Sin Chen et al. NATURE
- Epigenetic events in mammalian germ-cell development: reprogramming and beyond
- (2008) Hiroyuki Sasaki et al. NATURE REVIEWS GENETICS
- TRAMP-mediated RNA surveillance prevents spurious entry of RNAs into the Schizosaccharomyces pombe siRNA pathway
- (2008) Marc Bühler et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Roles of the Clr4 methyltransferase complex in nucleation, spreading and maintenance of heterochromatin
- (2008) Ke Zhang et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Splicing Factors Facilitate RNAi-Directed Silencing in Fission Yeast
- (2008) E. H. Bayne et al. SCIENCE
Find the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
SearchAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now