A pan-genomic approach to genome databases using maize as a model system

Genome assembly and population genomic analysis provide insights into the evolution of modern sweet corn

(2021) Ying Hu et al.   Nature Communications

Pan-genomics in the human genome era

(2020) Rachel M. Sherman et al.   NATURE REVIEWS GENETICS

A platinum standard pan-genome resource that represents the population structure of Asian rice

(2020) Yong Zhou et al.   Scientific Data

European maize genomes highlight intraspecies variation in repeat and gene content

(2020) Georg Haberer et al.   NATURE GENETICS

A new decade and new data at SoyBase, the USDA-ARS soybean genetics and genomics database

(2020) Anne V Brown et al.   NUCLEIC ACIDS RESEARCH

Technological advances in maize breeding: past, present and future

(2019) Carson Andorf et al.   THEORETICAL AND APPLIED GENETICS

Assembly Graph Browser: interactive visualization of assembly graphs

(2019) Alla Mikheenko et al.   BIOINFORMATICS

The tomato pan-genome uncovers new genes and a rare allele regulating fruit flavor

(2019) Lei Gao et al.   NATURE GENETICS

Characterization of introgression from the teosinte Zea mays ssp. mexicana to Mexican highland maize

(2019) Eric Gonzalez-Segovia et al.   PeerJ

Pan-genome analysis highlights the extent of genomic variation in cultivated and wild rice

(2018) Qiang Zhao et al.   NATURE GENETICS

The maize W22 genome provides a foundation for functional genomics and transposon biology

(2018) Nathan M. Springer et al.   NATURE GENETICS

Extensive intraspecific gene order and gene structural variations between Mo17 and other maize genomes

(2018) Silong Sun et al.   NATURE GENETICS

MaizeGDB 2018: the maize multi-genome genetics and genomics database

(2018) John L Portwood et al.   NUCLEIC ACIDS RESEARCH

A study of allelic diversity underlying flowering-time adaptation in maize landraces

(2017) J Alberto Romero Navarro et al.   NATURE GENETICS

Contributions of Zea mays subspecies mexicana haplotypes to modern maize

(2017) Ning Yang et al.   Nature Communications

Draft Assembly of Elite Inbred Line PH207 Provides Insights into Genomic and Transcriptome Diversity in Maize

(2016) Candice N. Hirsch et al.   PLANT CELL

Legume information system (LegumeInfo.org): a key component of a set of federated data resources for the legume family

(2015) Sudhansu Dash et al.   NUCLEIC ACIDS RESEARCH

Association Mapping across Numerous Traits Reveals Patterns of Functional Variation in Maize

(2014) Jason G. Wallace et al.   PLoS Genetics

Diversity in global maize germplasm: Characterization and utilization

(2012) B M Prasanna   JOURNAL OF BIOSCIENCES

Identification of genes involved in cell wall biogenesis in grasses by differential gene expression profiling of elongating and non-elongating maize internodes

(2011) Maurice Bosch et al.   JOURNAL OF EXPERIMENTAL BOTANY

Genome-wide association study of leaf architecture in the maize nested association mapping population

(2011) Feng Tian et al.   NATURE GENETICS

Genome-wide nested association mapping of quantitative resistance to northern leaf blight in maize

(2011) J. A. Poland et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Genetic Architecture of Maize Flowering Time

(2009) E. S. Buckler et al.   SCIENCE

Genetic Design and Statistical Power of Nested Association Mapping in Maize

(2008) Jianming Yu et al.   GENETICS

Maize and sorghum: genetic resources for bioenergy grasses

(2008) Nicholas C. Carpita et al.   TRENDS IN PLANT SCIENCE