neoDL: a novel neoantigen intrinsic feature-based deep learning model identifies IDH wild-type glioblastomas with the longest survival

Large-Scale Analysis Reveals Gene Signature for Survival Prediction in Primary Glioblastoma

(2020) Birbal Prasad et al.   MOLECULAR NEUROBIOLOGY

Prognostic Gene Discovery in Glioblastoma Patients using Deep Learning

(2019) Kelvin Wong et al.   Cancers

Treatment of Glioblastoma (GBM) with the Addition of Tumor-Treating Fields (TTF): A Review

(2019) Denise Fabian et al.   Cancers

A RNA sequencing-based six-gene signature for survival prediction in patients with glioblastoma

(2019) Shuguang Zuo et al.   Scientific Reports

Neoantigens in Chronic Obstructive Pulmonary Disease and Lung Cancer: A Point of View

(2019) Lona Zeneyedpour et al.   Proteomics Clinical Applications

Automatic discovery of image-based signatures for ipilimumab response prediction in malignant melanoma

(2019) Nathalie Harder et al.   Scientific Reports

Evolving neoantigen profiles in colorectal cancers with DNA repair defects

(2019) Giuseppe Rospo et al.   Genome Medicine

Machine-Learning Prediction of Tumor Antigen Immunogenicity in the Selection of Therapeutic Epitopes

(2019) Christof C. Smith et al.   Cancer Immunology Research

Structure Based Prediction of Neoantigen Immunogenicity

(2019) Timothy P. Riley et al.   Frontiers in Immunology

Cancer Diagnosis Using Deep Learning: A Bibliographic Review

(2019) Khushboo Munir et al.   Cancers

Deep-Learning Convolutional Neural Networks Accurately Classify Genetic Mutations in Gliomas

(2018) P. Chang et al.   AMERICAN JOURNAL OF NEURORADIOLOGY

Population-level distribution and putative immunogenicity of cancer neoepitopes

(2018) Mary A. Wood et al.   BMC CANCER

Deep learning in pharmacogenomics: from gene regulation to patient stratification

(2018) Alexandr A Kalinin et al.   PHARMACOGENOMICS

Deep learning based tissue analysis predicts outcome in colorectal cancer

(2018) Dmitrii Bychkov et al.   Scientific Reports

Pan-cancer analysis of neoepitopes

(2018) Gabriel N. Teku et al.   Scientific Reports

PASNet: pathway-associated sparse deep neural network for prognosis prediction from high-throughput data

(2018) Jie Hao et al.   BMC BIOINFORMATICS

Glioma Grading on Conventional MR Images: A Deep Learning Study With Transfer Learning

(2018) Yang Yang et al.   Frontiers in Neuroscience

Tumor Mutational Burden as an Independent Predictor of Response to Immunotherapy in Diverse Cancers

(2017) Aaron M. Goodman et al.   MOLECULAR CANCER THERAPEUTICS

Biological and therapeutic implications of multisector sequencing in newly diagnosed glioblastoma

(2017) Tatenda Mahlokozera et al.   NEURO-ONCOLOGY

Analysis of 100,000 human cancer genomes reveals the landscape of tumor mutational burden

(2017) Zachary R. Chalmers et al.   Genome Medicine

Ror2 signaling regulates Golgi structure and transport through IFT20 for tumor invasiveness

(2017) Michiru Nishita et al.   Scientific Reports

A Deep Learning-Based Radiomics Model for Prediction of Survival in Glioblastoma Multiforme

(2017) Jiangwei Lao et al.   Scientific Reports

Molecular Profiling Reveals Biologically Discrete Subsets and Pathways of Progression in Diffuse Glioma

(2016) Michele Ceccarelli et al.   CELL

Systemic RNA delivery to dendritic cells exploits antiviral defence for cancer immunotherapy

(2016) Lena M. Kranz et al.   NATURE

Clonal evolution of glioblastoma under therapy

(2016) Jiguang Wang et al.   NATURE GENETICS

Clonal neoantigens elicit T cell immunoreactivity and sensitivity to immune checkpoint blockade

(2016) N. McGranahan et al.   SCIENCE

Tumor neoantigens: building a framework for personalized cancer immunotherapy

(2015) Matthew M. Gubin et al.   JOURNAL OF CLINICAL INVESTIGATION

Gender Disparity and Mutation Burden in Metastatic Melanoma

(2015) Sameer Gupta et al.   JNCI-Journal of the National Cancer Institute

Deep learning

(2015) Yann LeCun et al.   NATURE

Neoantigens in cancer immunotherapy

(2015) T. N. Schumacher et al.   SCIENCE

Systematic pan-cancer analysis of tumour purity

(2015) Dvir Aran et al.   Nature Communications

Gender Disparity and Mutation Burden in Metastatic Melanoma

(2015) Sameer Gupta et al.   JNCI-Journal of the National Cancer Institute

PI3 kinase mutations and mutational load as poor prognostic markers in diffuse glioma patients

(2015) Kaspar Draaisma et al.   Acta Neuropathologica Communications

Tumor Mutation Burden Forecasts Outcome in Ovarian Cancer with BRCA1 or BRCA2 Mutations

(2013) Nicolai Juul Birkbak et al.   PLoS One

Inferring tumour purity and stromal and immune cell admixture from expression data

(2013) Kosuke Yoshihara et al.   Nature Communications

Exploiting the Mutanome for Tumor Vaccination

(2012) J. C. Castle et al.   CANCER RESEARCH

Exciting New Advances in Neuro-Oncology: The Avenue to a Cure for Malignant Glioma

(2010) E. G. Van Meir et al.   CA-A CANCER JOURNAL FOR CLINICIANS