Influence of Extraction Solvent on Nontargeted Metabolomics Analysis of Enrichment Reactor Cultures Performing Enhanced Biological Phosphorus Removal (EBPR)

Recent advances in understanding the ecophysiology of enhanced biological phosphorus removal

(2021) Samarpita Roy et al.   CURRENT OPINION IN BIOTECHNOLOGY

Holistic Approach to Phosphorus Recovery from Urban Wastewater: Enhanced Biological Removal Combined with Precipitation

(2020) Maria Concetta Tomei et al.   Sustainability

Integration of time-series meta-omics data reveals how microbial ecosystems respond to disturbance

(2020) Malte Herold et al.   Nature Communications

Multi-omics of the gut microbial ecosystem in inflammatory bowel diseases

(2019) Jason Lloyd-Price et al.   NATURE

Annotated bacterial chromosomes from frame-shift-corrected long-read metagenomic data

(2019) Krithika Arumugam et al.   Microbiome

Re-evaluating the microbiology of the enhanced biological phosphorus removal process

(2019) Per Halkjær Nielsen et al.   CURRENT OPINION IN BIOTECHNOLOGY

Metaproteomic and Metabolomic Approaches for Characterizing the Gut Microbiome

(2019) Danielle L. Peters et al.   PROTEOMICS

Metaphenomic Responses of a Native Prairie Soil Microbiome to Moisture Perturbations

(2019) Taniya Roy Chowdhury et al.   mSystems

Learning representations of microbe–metabolite interactions

(2019) James T. Morton et al.   NATURE METHODS

Metabolic Traits of Candidatus Accumulibacter clade IIF Strain SCELSE-1 Using Amino Acids As Carbon Sources for Enhanced Biological Phosphorus Removal

(2019) Guanglei Qiu et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

ape 5.0: an environment for modern phylogenetics and evolutionary analyses in R

(2018) Emmanuel Paradis et al.   BIOINFORMATICS

Extracellular polymeric substances of biofilms: Suffering from an identity crisis

(2018) Thomas Seviour et al.   WATER RESEARCH

Polyphosphate-accumulating organisms in full-scale tropical wastewater treatment plants use diverse carbon sources

(2018) Guanglei Qiu et al.   WATER RESEARCH

Functional Enzyme-Based Approach for Linking Microbial Community Functions with Biogeochemical Process Kinetics

(2017) Minjing Li et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Open Science for Identifying “Known Unknown” Chemicals

(2017) Emma L. Schymanski et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Global Profiling of Metabolite and Lipid Soluble Microbial Products in Anaerobic Wastewater Reactor Supernatant Using UPLC–MSE

(2017) Phornpimon Tipthara et al.   JOURNAL OF PROTEOME RESEARCH

A Critical Assessment of the Microorganisms Proposed to be Important to Enhanced Biological Phosphorus Removal in Full-Scale Wastewater Treatment Systems

(2017) Mikkel Stokholm-Bjerregaard et al.   Frontiers in Microbiology

Dark matter in host-microbiome metabolomics: Tackling the unknowns–A review

(2017) B.Y. Loulou Peisl et al.   ANALYTICA CHIMICA ACTA

Development and Application of Ultra-Performance Liquid Chromatography-TOF MS for Precision Large Scale Urinary Metabolic Phenotyping

(2016) Matthew R. Lewis et al.   ANALYTICAL CHEMISTRY

Complex heatmaps reveal patterns and correlations in multidimensional genomic data

(2016) Zuguang Gu et al.   BIOINFORMATICS

Phosphorus removal and recovery from domestic wastewater in a novel process of enhanced biological phosphorus removal coupled with crystallization

(2016) Haiming Zou et al.   BIORESOURCE TECHNOLOGY

Reaction-centric modeling of microbial ecosystems

(2016) Stilianos Louca et al.   ECOLOGICAL MODELLING

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

Bacterial communities in full-scale wastewater treatment systems

(2016) Agnieszka Cydzik-Kwiatkowska et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

Integrative microbial community analysis reveals full-scale enhanced biological phosphorus removal under tropical conditions

(2016) Yingyu Law et al.   Scientific Reports

Untargeted UPLC-MS Profiling Pipeline to Expand Tissue Metabolome Coverage: Application to Cardiovascular Disease

(2015) Panagiotis A. Vorkas et al.   ANALYTICAL CHEMISTRY

Environmental metabolomics: Analytical strategies

(2015) Melissa C. Kido Soule et al.   MARINE CHEMISTRY

Integrated omics for the identification of key functionalities in biological wastewater treatment microbial communities

(2015) Shaman Narayanasamy et al.   Microbial Biotechnology

Expanding our view of genomic diversity inCandidatus Accumulibacter clades

(2014) Connor T. Skennerton et al.   ENVIRONMENTAL MICROBIOLOGY

Untargeted metabolomics studies employing NMR and LC–MS reveal metabolic coupling between Nanoarcheum equitans and its archaeal host Ignicoccus hospitalis

(2014) Timothy Hamerly et al.   Metabolomics

Community-integrated omics links dominance of a microbial generalist to fine-tuned resource usage

(2014) Emilie E. L. Muller et al.   Nature Communications

A Versatile Targeted Metabolomics Method for the Rapid Quantification of Multiple Classes of Phenolics in Fruits and Beverages

(2012) Urska Vrhovsek et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Growing Unculturable Bacteria

(2012) E. J. Stewart   JOURNAL OF BACTERIOLOGY

The biological interpretation of metabolomic data can be misled by the extraction method used

(2011) Xavier Duportet et al.   Metabolomics

Metabolite extraction from adherently growing mammalian cells for metabolomics studies: optimization of harvesting and extraction protocols

(2010) Katja Dettmer et al.   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

KEGGgraph: a graph approach to KEGG PATHWAY in R and bioconductor

(2009) Jitao David Zhang et al.   BIOINFORMATICS

Sample preparation for plant metabolomics

(2009) Hye Kyong Kim et al.   PHYTOCHEMICAL ANALYSIS

Phosphorus Removal and Recovery from Municipal Wastewaters

(2008) S. A. Parsons et al.   Elements