Near-atomic structure of an atadenovirus reveals a conserved capsid-binding motif and intergenera variations in cementing proteins

The structure of enteric human adenovirus 41—A leading cause of diarrhea in children

(2021) K. Rafie et al.   Science Advances

Cryo-EM structure of enteric adenovirus HAdV-F41 highlights structural variations among human adenoviruses

(2021) Marta Pérez-Illana et al.   Science Advances

Integration of Cryo-EM Model Building Software in Scipion

(2020) M. Martínez et al.   Journal of Chemical Information and Modeling

Dynamic competition for hexon binding between core protein VII and lytic protein VI promotes adenovirus maturation and entry

(2020) Mercedes Hernando-Pérez et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Localized reconstruction in scipion expedites the analysis of symmetry mismatches in Cryo-EM data

(2020) Vahid Abrishami et al.   PROGRESS IN BIOPHYSICS & MOLECULAR BIOLOGY

HH-suite3 for fast remote homology detection and deep protein annotation

(2019) Martin Steinegger et al.   BMC BIOINFORMATICS

Unconventional gene arrangement and content revealed by full genome analysis of the white sturgeon adenovirus, the single member of the genus Ichtadenovirus

(2019) Andor Doszpoly et al.   INFECTION GENETICS AND EVOLUTION

The biology of the adenovirus E1B 55K protein

(2019) Paloma Hidalgo et al.   FEBS LETTERS

Adenoviruses across the animal kingdom: a walk in the zoo

(2019) Balázs Harrach et al.   FEBS LETTERS

Structure-based assessment of protein-protein interactions and accessibility of protein IX in adenoviruses with implications for antigen display

(2018) Nathaniel L. Matteson et al.   VIROLOGY

Real-space refinement in PHENIX for cryo-EM and crystallography

(2018) Pavel V. Afonine et al.   Acta Crystallographica Section D-Structural Biology

The depths of virus exaptation

(2018) Eugene V Koonin et al.   Current Opinion in Virology

Atomic Structures of Minor Proteins VI and VII in Human Adenovirus

(2017) Xinghong Dai et al.   JOURNAL OF VIROLOGY

Improvements to the APBS biomolecular solvation software suite

(2017) Elizabeth Jurrus et al.   PROTEIN SCIENCE

Cryo-EM structure of human adenovirus D26 reveals the conservation of structural organization among human adenoviruses

(2017) Xiaodi Yu et al.   Science Advances

Scipion: A software framework toward integration, reproducibility and validation in 3D electron microscopy

(2016) J.M. de la Rosa-Trevín et al.   JOURNAL OF STRUCTURAL BIOLOGY

Evolution and Cryo-electron Microscopy Capsid Structure of a North American Bat Adenovirus and Its Relationship to Other Mastadenoviruses

(2016) Nicole Hackenbrack et al.   JOURNAL OF VIROLOGY

Alignment of direct detection device micrographs using a robust Optical Flow approach

(2015) Vahid Abrishami et al.   JOURNAL OF STRUCTURAL BIOLOGY

CTFFIND4: Fast and accurate defocus estimation from electron micrographs

(2015) Alexis Rohou et al.   JOURNAL OF STRUCTURAL BIOLOGY

Structures of Adenovirus Incomplete Particles Clarify Capsid Architecture and Show Maturation Changes of Packaging Protein L1 52/55k

(2015) Gabriela N. Condezo et al.   JOURNAL OF VIROLOGY

Distribution of DNA-condensing protein complexes in the adenovirus core

(2015) Ana J. Pérez-Berná et al.   NUCLEIC ACIDS RESEARCH

Characterisation of the Equine adenovirus 2 genome

(2015) Carla Giles et al.   VETERINARY MICROBIOLOGY

Tools for macromolecular model building and refinement into electron cryo-microscopy reconstructions

(2015) Alan Brown et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

DISOPRED3: precise disordered region predictions with annotated protein-binding activity

(2014) David T. Jones et al.   BIOINFORMATICS

Circumventing Antivector Immunity: Potential Use of Nonhuman Adenoviral Vectors

(2014) Estrella Lopez-Gordo et al.   HUMAN GENE THERAPY

Molecular Characterization of a Lizard Adenovirus Reveals the First Atadenovirus with Two Fiber Genes and the First Adenovirus with Either One Short or Three Long Fibers per Penton

(2014) J. J. Penzes et al.   JOURNAL OF VIROLOGY

Cryo-EM structures of two bovine adenovirus type 3 intermediates

(2014) Lingpeng Cheng et al.   VIROLOGY

Structure, Function and Dynamics in Adenovirus Maturation

(2014) Walter Mangel et al.   Viruses-Basel

Xmipp 3.0: An improved software suite for image processing in electron microscopy

(2013) J.M. de la Rosa-Trevín et al.   JOURNAL OF STRUCTURAL BIOLOGY

The Adenovirus L4-22K Protein Has Distinct Functions in the Posttranscriptional Regulation of Gene Expression and Encapsidation of the Viral Genome

(2013) D. Guimet et al.   JOURNAL OF VIROLOGY

The Adenovirus L4-33K Protein Regulates both Late Gene Expression Patterns and Viral DNA Packaging

(2013) K. Wu et al.   JOURNAL OF VIROLOGY

Quantifying the local resolution of cryo-EM density maps

(2013) Alp Kucukelbir et al.   NATURE METHODS

High-resolution noise substitution to measure overfitting and validate resolution in 3D structure determination by single particle electron cryomicroscopy

(2013) Shaoxia Chen et al.   ULTRAMICROSCOPY

RELION: Implementation of a Bayesian approach to cryo-EM structure determination

(2012) Sjors H.W. Scheres   JOURNAL OF STRUCTURAL BIOLOGY

Latest Insights on Adenovirus Structure and Assembly

(2012) Carmen San Martín   Viruses-Basel

Characterization of Empty Adenovirus Particles Assembled in the Absence of a Functional Adenovirus IVa2 Protein

(2011) P. Ostapchuk et al.   JOURNAL OF VIROLOGY

Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega

(2011) F. Sievers et al.   Molecular Systems Biology

Features and development ofCoot

(2010) P. Emsley et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Atomic Structure of Human Adenovirus by Cryo-EM Reveals Interactions Among Protein Networks

(2010) H. Liu et al.   SCIENCE

Jalview Version 2--a multiple sequence alignment editor and analysis workbench

(2009) A. M. Waterhouse et al.   BIOINFORMATICS

Identification of coagulation factor (F)X binding sites on the adenovirus serotype 5 hexon: effect of mutagenesis on FX interactions and gene transfer

(2009) R. Alba et al.   BLOOD

Three-Dimensional Structure of Canine Adenovirus Serotype 2 Capsid

(2008) G. Schoehn et al.   JOURNAL OF VIROLOGY

Cryoelectron Microscopy Map of Atadenovirus Reveals Cross-Genus Structural Differences from Human Adenovirus

(2008) R. S. Pantelic et al.   JOURNAL OF VIROLOGY

PCR-sequence characterization of new adenoviruses found in reptiles and the first successful isolation of a lizard adenovirus

(2008) T PAPP et al.   VETERINARY MICROBIOLOGY