Multi-Omic Analyses Reveal Habitat Adaptation of Marine Cyanobacterium Synechocystis sp. PCC 7338

Comparative Primary Metabolic and Lipidomic Profiling of Freshwater and Marine Synechocystis Strains Using by GC-MS and NanoESI-MS Analyses

(2020) YuJin Noh et al.   BIOTECHNOLOGY AND BIOPROCESS ENGINEERING

Responses of Membranes and the Photosynthetic Apparatus to Salt Stress in Cyanobacteria

(2020) Wenjing Yang et al.   Frontiers in Plant Science

Rewiring the specificity of extracytoplasmic function sigma factors

(2020) Horia Todor et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Exploring the low photosynthetic efficiency of cyanobacteria in blue light using a mutant lacking phycobilisomes

(2019) Veerle M. Luimstra et al.   PHOTOSYNTHESIS RESEARCH

Primary transcriptome and translatome analysis determines transcriptional and translational regulatory elements encoded in the Streptomyces clavuligerus genome

(2019) Soonkyu Hwang et al.   NUCLEIC ACIDS RESEARCH

Mixotrophy in Synechocystis sp. for the treatment of wastewater with high nutrient content: effect of CO2 and light

(2019) Giulia Trentin et al.   BIOPROCESS AND BIOSYSTEMS ENGINEERING

The Transcription Unit Architecture of Streptomyces lividans TK24

(2019) Yongjae Lee et al.   Frontiers in Microbiology

Progress and challenges in engineering cyanobacteria as chassis for light‐driven biotechnology

(2019) Andrew Hitchcock et al.   Microbial Biotechnology

Evolutionary Convergence of Pathway-Specific Enzyme Expression Stoichiometry

(2018) Jean-Benoît Lalanne et al.   CELL

MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms

(2018) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

High-resolution RNA 3′-ends mapping of bacterial Rho-dependent transcripts

(2018) Daniel Dar et al.   NUCLEIC ACIDS RESEARCH

High throughput ANI analysis of 90K prokaryotic genomes reveals clear species boundaries

(2018) Chirag Jain et al.   Nature Communications

Responses of Synechocystis sp. PCC 6803 to heterologous biosynthetic pathways

(2017) Konstantinos Vavitsas et al.   Microbial Cell Factories

Term-seq reveals abundant ribo-regulation of antibiotics resistance in bacteria

(2016) D. Dar et al.   SCIENCE

The dynamic transcriptional and translational landscape of the model antibiotic producer Streptomyces coelicolor A3(2)

(2016) Yujin Jeong et al.   Nature Communications

Different strategies of metabolic regulation in cyanobacteria: from transcriptional to biochemical control

(2016) Jiri Jablonsky et al.   Scientific Reports

The Transcriptional Landscape of the Photosynthetic Model Cyanobacterium Synechocystis sp. PCC6803

(2016) Miguel A. Hernández-Prieto et al.   Scientific Reports

Cyanobacteria: A Precious Bio-resource in Agriculture, Ecosystem, and Environmental Sustainability

(2016) Jay Shankar Singh et al.   Frontiers in Microbiology

Widespread formation of alternative 3′ UTR isoforms via transcription termination in archaea

(2016) Daniel Dar et al.   Nature Microbiology

Ferric Uptake Regulator (FUR) protein: properties and implications in cyanobacteria

(2015) Manish Singh Kaushik et al.   ANNALS OF MICROBIOLOGY

BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs

(2015) Felipe A. Simão et al.   BIOINFORMATICS

Distribution and diversity of ribosome binding sites in prokaryotic genomes

(2015) Damilola Omotajo et al.   BMC GENOMICS

Structural organization of an intact phycobilisome and its association with photosystem II

(2015) Leifu Chang et al.   CELL RESEARCH

Genome Engineering in Cyanobacteria: Where We Are and Where We Need To Go

(2015) C. Josh Ramey et al.   ACS Synthetic Biology

Comparative Analysis of the Primary Transcriptome of Synechocystis sp. PCC 6803

(2014) Matthias Kopf et al.   DNA RESEARCH

Functional Role of PilA in Iron Acquisition in the Cyanobacterium Synechocystis sp. PCC 6803

(2014) Jacob J. Lamb et al.   PLoS One

Pilon: An Integrated Tool for Comprehensive Microbial Variant Detection and Genome Assembly Improvement

(2014) Bruce J. Walker et al.   PLoS One

Complete genome of a nonphotosynthetic cyanobacterium in a diatom reveals recent adaptations to an intracellular lifestyle

(2014) T. Nakayama et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Attachment of phycobilisomes in an antenna-photosystem I supercomplex of cyanobacteria

(2014) M. Watanabe et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Synthesis of 2,3-butanediol by Synechocystis sp. PCC6803 via heterologous expression of a catabolic pathway from lactic acid- and enterobacteria

(2013) Philipp E. Savakis et al.   METABOLIC ENGINEERING

Cyanobacterial conversion of carbon dioxide to 2,3-butanediol

(2013) John W. K. Oliver et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Metabolic Engineering of Synechocystis sp. Strain PCC 6803 for Isobutanol Production

(2012) Arul M. Varman et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Aquaporin AqpZ Is Involved in Cell Volume Regulation and Sensitivity to Osmotic Stress in Synechocystis sp. Strain PCC 6803

(2012) M. Akai et al.   JOURNAL OF BACTERIOLOGY

Comparative Analysis of Regulatory Elements between Escherichia coli and Klebsiella pneumoniae by Genome-Wide Transcription Start Site Profiling

(2012) Donghyuk Kim et al.   PLoS Genetics

Iron Utilization in Marine Cyanobacteria and Eukaryotic Algae

(2012) Joe Morrissey et al.   Frontiers in Microbiology

ViennaRNA Package 2.0

(2011) Ronny Lorenz et al.   Algorithms for Molecular Biology

Characteristics of the Freshwater Cyanobacterium Microcystis aeruginosa Grown in Iron-Limited Continuous Culture

(2011) T. C. Dang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

PGAP: pan-genomes analysis pipeline

(2011) Yongbing Zhao et al.   BIOINFORMATICS

FIMO: scanning for occurrences of a given motif

(2011) Charles E. Grant et al.   BIOINFORMATICS

Metabolic engineering of cyanobacteria for 1-butanol production from carbon dioxide

(2011) Ethan I. Lan et al.   METABOLIC ENGINEERING

KOBAS 2.0: a web server for annotation and identification of enriched pathways and diseases

(2011) Chen Xie et al.   NUCLEIC ACIDS RESEARCH

An experimentally anchored map of transcriptional start sites in the model cyanobacteriumSynechocystissp. PCC6803

(2011) Jan Mitschke et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Engineering cyanobacteria to generate high-value products

(2011) Daniel C. Ducat et al.   TRENDS IN BIOTECHNOLOGY

Structural and operational complexity of the Geobacter sulfurreducens genome

(2010) Y. Qiu et al.   GENOME RESEARCH

The primary transcriptome of the major human pathogen Helicobacter pylori

(2010) Cynthia M. Sharma et al.   NATURE

Occurrence, divergence and evolution of intrinsic terminators across Eubacteria

(2009) Anirban Mitra et al.   GENOMICS

Engineering a platform for photosynthetic isoprene production in cyanobacteria, using Synechocystis as the model organism

(2009) Pia Lindberg et al.   METABOLIC ENGINEERING

MEME SUITE: tools for motif discovery and searching

(2009) T. L. Bailey et al.   NUCLEIC ACIDS RESEARCH

The Mechanism of Iron Homeostasis in the Unicellular Cyanobacterium Synechocystis sp. PCC 6803 and Its Relationship to Oxidative Stress

(2009) S. Shcolnick et al.   PLANT PHYSIOLOGY

Salt stress inhibits photosystems II and I in cyanobacteria

(2008) Suleyman I. Allakhverdiev et al.   PHOTOSYNTHESIS RESEARCH