Illumina Sequencing and Metabolomics Analysis Reveal Thiamine Modulation of Ruminal Microbiota and Metabolome Characteristics in Goats Fed a High-Concentrate Diet

Combined supplementation of Lactobacillus fermentum and Pediococcus acidilactici promoted growth performance, alleviated inflammation, and modulated intestinal microbiota in weaned pigs

(2019) Shilan Wang et al.   BMC Veterinary Research

Thiamine ameliorates inflammation of the ruminal epithelium of Saanen goats suffering from subacute ruminal acidosis

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Dietary protein reduction on microbial protein, amino acid digestibility, and body retention in beef cattle: 2. Amino acid intestinal absorption and their efficiency for whole-body deposition

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Effectiveness of Interventions to Modulate the Rumen Microbiota Composition and Function in Pre-ruminant and Ruminant Lambs

(2018) Cristina Saro et al.   Frontiers in Microbiology

Thiamine supplementation facilitates thiamine transporter expression in the rumen epithelium and attenuates high-grain-induced inflammation in low-yielding dairy cows

(2017) X.H. Pan et al.   JOURNAL OF DAIRY SCIENCE

Illumina Sequencing Approach to Characterize Thiamine Metabolism Related Bacteria and the Impacts of Thiamine Supplementation on Ruminal Microbiota in Dairy Cows Fed High-Grain Diets

(2017) Xiaohua Pan et al.   Frontiers in Microbiology

Feeding a High Concentration Diet Induces Unhealthy Alterations in the Composition and Metabolism of Ruminal Microbiota and Host Response in a Goat Model

(2017) Canfeng Hua et al.   Frontiers in Microbiology

Effects of Glucose and Starch on Lactate Production by Newly Isolated Streptococcus bovis S1 from Saanen Goats

(2016) Lianmin Chen et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Gas chromatography-mass spectrometry metabolomics of goat milk with different polymorphism at the α S1 -casein genotype locus

(2016) Pierluigi Caboni et al.   JOURNAL OF DAIRY SCIENCE

Relationship between thiamine and subacute ruminal acidosis induced by a high-grain diet in dairy cows

(2016) X.H. Pan et al.   JOURNAL OF DAIRY SCIENCE

In vitroeffects of sodium bicarbonate buffer on rumen fermentation, levels of lipopolysaccharide and biogenic amine, and composition of rumen microbiota

(2016) Shengyong Mao et al.   JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE

VSEARCH: a versatile open source tool for metagenomics

(2016) Torbjørn Rognes et al.   PeerJ

Microbiome-metabolome analysis reveals unhealthy alterations in the composition and metabolism of ruminal microbiota with increasing dietary grain in a goat model

(2015) Sheng-Yong Mao et al.   ENVIRONMENTAL MICROBIOLOGY

The therapeutic effects of 4-phenylbutyric acid in maintaining proteostasis

(2015) P.S. Kolb et al.   INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY

Pyrosequencing reveals shifts in the bacterial epimural community relative to dietary concentrate amount in goats

(2015) S.U. Wetzels et al.   JOURNAL OF DAIRY SCIENCE

Effects of different dietary concentrate to forage ratio and thiamine supplementation on the rumen fermentation and ruminal bacterial community in dairy cows

(2015) Hongrong Wang et al.   Animal Production Science

Serum Metabolomics Study of Polycystic Ovary Syndrome Based on Liquid Chromatography–Mass Spectrometry

(2014) Xinjie Zhao et al.   JOURNAL OF PROTEOME RESEARCH

Thiamine triphosphate: a ubiquitous molecule in search of a physiological role

(2014) Lucien Bettendorff et al.   METABOLIC BRAIN DISEASE

The gut microbiota, bacterial metabolites and colorectal cancer

(2014) Petra Louis et al.   NATURE REVIEWS MICROBIOLOGY

Changes in the Rumen Epimural Bacterial Diversity of Beef Cattle as Affected by Diet and Induced Ruminal Acidosis

(2013) R. M. Petri et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Effects of subacute ruminal acidosis challenges on fermentation and biogenic amines in the rumen of dairy cows

(2013) D.S. Wang et al.   Livestock Science

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

Liquid chromatography quadrupole time-of-flight mass spectrometry characterization of metabolites guided by the METLIN database

(2013) Zheng-Jiang Zhu et al.   Nature Protocols

Current trends and challenges in sample preparation for global metabolomics using liquid chromatography–mass spectrometry

(2012) Dajana Vuckovic   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

Microbial ecology of the rumen evaluated by 454 GS FLX pyrosequencing is affected by starch and oil supplementation of diets

(2012) Asma Zened et al.   FEMS MICROBIOLOGY ECOLOGY

A metabolomics approach to uncover the effects of grain diets on rumen health in dairy cows

(2012) F. Saleem et al.   JOURNAL OF DAIRY SCIENCE

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

The Otologic MicrobiomeA Study of the Bacterial Microbiota in a Pediatric Patient With Chronic Serous Otitis Media Using 16SrRNA Gene-Based Pyrosequencing

(2011) Cindy M. Liu   ARCHIVES OF OTOLARYNGOLOGY-HEAD & NECK SURGERY

Impact of subacute ruminal acidosis (SARA) adaptation and recovery on the density and diversity of bacteria in the rumen of dairy cows

(2011) Sarah E. Hook et al.   FEMS MICROBIOLOGY ECOLOGY

Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons

(2011) B. J. Haas et al.   GENOME RESEARCH

Rumen Microbial Population Dynamics during Adaptation to a High-Grain Diet

(2010) S. C. Fernando et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Composition, spatial distribution, and diversity of the bacterial communities in the rumen of cows fed different forages

(2010) Yunhong Kong et al.   FEMS MICROBIOLOGY ECOLOGY

Effect of thiamine concentration on animal health, feedlot performance, carcass characteristics, and ruminal hydrogen sulfide concentrations in lambs fed diets based on 60% distillers dried grains plus solubles1

(2010) B. W. Neville et al.   JOURNAL OF ANIMAL SCIENCE

The effects of forage proportion and rapidly degradable dry matter from concentrate on ruminal digestion in dairy cows fed corn silage–based diets with fixed neutral detergent fiber and starch contents

(2010) C. Lechartier et al.   JOURNAL OF DAIRY SCIENCE

Isolation of previously uncultured rumen bacteria by dilution to extinction using a new liquid culture medium

(2010) Nikki Kenters et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Attenuation of diabetic nephropathy in diabetes rats induced by streptozotocin by regulating the endoplasmic reticulum stress inflammatory response

(2010) Wei Qi et al.   METABOLISM-CLINICAL AND EXPERIMENTAL

Comparative Genome Analysis of Prevotella ruminicola and Prevotella bryantii: Insights into Their Environmental Niche

(2010) Janaki Purushe et al.   MICROBIAL ECOLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

RRLC-MS/MS-based metabonomics combined with in-depth analysis of metabolic correlation network: finding potential biomarkers for breast cancer

(2009) Yanhua Chen et al.   ANALYST

Rumen Microbiome Composition Determined Using Two Nutritional Models of Subacute Ruminal Acidosis

(2009) E. Khafipour et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Characterization of the biochemical variability of bovine milk using metabolomics

(2009) Kurt J. Boudonck et al.   Metabolomics

LPS/TLR4 signal transduction pathway

(2008) Yong-Chen Lu et al.   CYTOKINE

Involvement of hypoxia-triggered endoplasmic reticulum stress in outlet obstruction-induced apoptosis in the urinary bladder

(2008) Norifumi Sawada et al.   LABORATORY INVESTIGATION