Shared evolutionary footprints suggest mitochondrial oxidative damage underlies multiple complex I losses in fungi

Twenty Years of the SENTRY Antifungal Surveillance Program: Results for Candida Species From 1997–2016

(2019) Michael A Pfaller et al.   Open Forum Infectious Diseases

Can Saccharomyces cerevisiae keep up as a model system in fungal azole susceptibility research?

(2019) Liesbeth Demuyser et al.   DRUG RESISTANCE UPDATES

The New Tree of Eukaryotes

(2019) Fabien Burki et al.   TRENDS IN ECOLOGY & EVOLUTION

Absence of Complex I Is Associated with Diminished Respiratory Chain Function in European Mistletoe

(2018) Andrew E. Maclean et al.   CURRENT BIOLOGY

Absence of Complex I Implicates Rearrangement of the Respiratory Chain in European Mistletoe

(2018) Jennifer Senkler et al.   CURRENT BIOLOGY

Alternative NAD(P)H dehydrogenase and alternative oxidase: Proposed physiological roles in animals

(2018) Allison E. McDonald et al.   MITOCHONDRION

Early loss of mitochondrial complex I and rewiring of glutathione metabolism in renal oncocytoma

(2018) Raj K. Gopal et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

GOATOOLS: A Python library for Gene Ontology analyses

(2018) D. V. Klopfenstein et al.   Scientific Reports

Evolutionary Emergence of Drug Resistance in Candida Opportunistic Pathogens

(2018) Ewa Ksiezopolska et al.   Genes

Tempo and Mode of Genome Evolution in the Budding Yeast Subphylum

(2018) Xing-Xing Shen et al.   CELL

The Mitochondrial Complex(I)ty of Cancer

(2017) Félix A. Urra et al.   Frontiers in Oncology

Mitochondrial complex I-linked disease

(2016) Richard J. Rodenburg   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Complex I function in mitochondrial supercomplexes

(2016) Giorgio Lenaz et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Impedance technology reduces the enumeration time ofBrettanomycesyeast during beer fermentation

(2016) Sanelle van Wyk et al.   Biotechnology Journal

BlastKOALA and GhostKOALA: KEGG Tools for Functional Characterization of Genome and Metagenome Sequences

(2016) Minoru Kanehisa et al.   JOURNAL OF MOLECULAR BIOLOGY

Comparative genome analysis of the oleaginous yeast Trichosporon fermentans reveals its potential applications in lipid accumulation

(2016) Qi Shen et al.   MICROBIOLOGICAL RESEARCH

Redundans: an assembly pipeline for highly heterozygous genomes

(2016) Leszek P. Pryszcz et al.   NUCLEIC ACIDS RESEARCH

Impedance technology reduces the enumeration time ofBrettanomycesyeast during beer fermentation

(2016) Sanelle van Wyk et al.   Biotechnology Journal

Mitochondrial Complex I Is a Global Regulator of Secondary Metabolism, Virulence and Azole Sensitivity in Fungi

(2016) Mike Bromley et al.   PLoS One

Origin and evolution of metabolic sub-cellular compartmentalization in eukaryotes

(2015) Toni Gabaldón et al.   BIOCHIMIE

Sweetpotato vines hydrolysate promotes single cell oils production of Trichosporon fermentans in high-density molasses fermentation

(2015) Qi Shen et al.   BIORESOURCE TECHNOLOGY

Yeast Proteome Dynamics from Single Cell Imaging and Automated Analysis

(2015) Yolanda T. Chong et al.   CELL

Mitochondrial genome evolution in yeasts: an all-encompassing view

(2015) Kelle C. Freel et al.   FEMS YEAST RESEARCH

Generator-specific targets of mitochondrial reactive oxygen species

(2015) Lea Bleier et al.   FREE RADICAL BIOLOGY AND MEDICINE

The mitochondrial protein Mcu1 plays important roles in carbon source utilization, filamentation, and virulence in Candida albicans

(2015) Guobo Guan et al.   FUNGAL GENETICS AND BIOLOGY

dipSPAdes: Assembler for Highly Polymorphic Diploid Genomes

(2015) Yana Safonova et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Divergent Mitochondrial Respiratory Chains in Phototrophic Relatives of Apicomplexan Parasites

(2015) Pavel Flegontov et al.   MOLECULAR BIOLOGY AND EVOLUTION

Gene Loss and Error-Prone RNA Editing in the Mitochondrion of Perkinsela , an Endosymbiotic Kinetoplastid

(2015) Vojtěch David et al.   mBio

Pseudomonas aeruginosa manipulates redox and iron homeostasis of its microbiota partner Aspergillus fumigatus via phenazines

(2015) Benoit Briard et al.   Scientific Reports

The Production of Reactive Oxygen Species Is a Universal Action Mechanism of Amphotericin B against Pathogenic Yeasts and Contributes to the Fungicidal Effect of This Drug

(2014) Ana Cecilia Mesa-Arango et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Echinocandin resistance

(2014) Maiken C. Arendrup et al.   CURRENT OPINION IN INFECTIOUS DISEASES

The Role of Mitochondria in Cellular Iron-Sulfur Protein Biogenesis: Mechanisms, Connected Processes, and Diseases

(2013) O. Stehling et al.   Cold Spring Harbor Perspectives in Biology

Fungicidal Drugs Induce a Common Oxidative-Damage Cellular Death Pathway

(2013) Peter Belenky et al.   Cell Reports

Azole Susceptibility and Transcriptome Profiling in Candida albicans Mitochondrial Electron Transport Chain Complex I Mutants

(2012) Nuo Sun et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Global Analysis of the Evolution and Mechanism of Echinocandin Resistance in Candida glabrata

(2012) Sheena D. Singh-Babak et al.   PLoS Pathogens

Dual localization of glutathione S-transferase in the cytosol and mitochondria: implications in oxidative stress, toxicity and disease

(2011) Haider Raza   FEBS Journal

Mitochondrial Dysfunction Impairs Tumor Suppressor p53 Expression/Function

(2011) Shannon Compton et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

The NCBI Taxonomy database

(2011) S. Federhen   NUCLEIC ACIDS RESEARCH

Mitochondrial oxidant stress triggers cell death in simulated ischemia–reperfusion

(2010) Gabriel Loor et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH

Mitochondrial proton and electron leaks

(2010) Martin Jastroch et al.   Essays in Biochemistry

Biopython: freely available Python tools for computational molecular biology and bioinformatics

(2009) P. J. A. Cock et al.   BIOINFORMATICS

Phylogenomics of the oxidative phosphorylation in fungi reveals extensive gene duplication followed by functional divergence

(2009) Marina Marcet-Houben et al.   BMC EVOLUTIONARY BIOLOGY

A heteroplasmic, not homoplasmic, mitochondrial DNA mutation promotes tumorigenesis via alteration in reactive oxygen species generation and apoptosis

(2009) J. S. Park et al.   HUMAN MOLECULAR GENETICS

How mitochondria produce reactive oxygen species

(2008) Michael P. Murphy   BIOCHEMICAL JOURNAL

Type II NADH dehydrogenase of the respiratory chain of Plasmodium falciparum and its inhibitors

(2008) Carolyn K. Dong et al.   BIOORGANIC & MEDICINAL CHEMISTRY LETTERS

Analysis of Two Genomes from the Mitochondrion-Like Organelle of the Intestinal Parasite Blastocystis: Complete Sequences, Gene Content, and Genome Organization

(2008) V. Perez-Brocal et al.   MOLECULAR BIOLOGY AND EVOLUTION