Artificial intelligence applications in inflammatory bowel disease: Emerging technologies and future directions

Development and Validation of a Deep Neural Network for Accurate Evaluation of Endoscopic Images From Patients with Ulcerative Colitis

(2020) Kento Takenaka et al.   GASTROENTEROLOGY

Automatic, computer-aided determination of endoscopic and histological inflammation in patients with mild to moderate ulcerative colitis based on red density

(2020) Peter Bossuyt et al.   GUT

Effect of a deep-learning computer-aided detection system on adenoma detection during colonoscopy (CADe-DB trial): a double-blind randomised study

(2020) Pu Wang et al.   Lancet Gastroenterology & Hepatology

Ulcer severity grading in video-capsule images of Crohn’s disease patients: an ordinal neural network solution

(2020) Barash Yiftach et al.   GASTROINTESTINAL ENDOSCOPY

Applying Machine Learning Models to Predict Medication Nonadherence in Crohn’s Disease Maintenance Therapy

(2020) Lei Wang et al.   Patient Preference and Adherence

Detecting ulcerative colitis from colon samples using efficient feature selection and machine learning

(2020) Hanieh Marvi Khorasani et al.   Scientific Reports

Development of a susceptibility gene based novel predictive model for the diagnosis of ulcerative colitis using random forest and artificial neural network

(2020) Hanyang Li et al.   Aging-US

Can natural language processing help differentiate inflammatory intestinal diseases in China? Models applying random forest and convolutional neural network approaches

(2020) Yuanren Tong et al.   BMC Medical Informatics and Decision Making

Deep learning enabled classification of Mayo endoscopic subscore in patients with ulcerative colitis

(2020) Hriday P. Bhambhvani et al.   EUROPEAN JOURNAL OF GASTROENTEROLOGY & HEPATOLOGY

Computer aided diagnosis with monochromatic light endoscopy for scoring histological remission in ulcerative colitis.

(2020) Peter Bossuyt et al.   GASTROENTEROLOGY

Central reading of ulcerative colitis clinical trial videos using neural networks

(2020) Klaus Gottlieb et al.   GASTROENTEROLOGY

Potential for Standardization and Automation for Pathology and Endoscopy in Inflammatory Bowel Disease

(2020) Sana Syed et al.   INFLAMMATORY BOWEL DISEASES

Artificial Intelligence-Assisted Colonoscopy for Detection of Colon Polyps: a Prospective, Randomized Cohort Study

(2020) Yuchen Luo et al.   JOURNAL OF GASTROINTESTINAL SURGERY

A Machine Learning Model Accurately Predicts Ulcerative Colitis Activity at One Year in Patients Treated with Anti-Tumour Necrosis Factor α Agents

(2020) Iolanda Valentina Popa et al.   Medicina-Lithuania

Real-time automatic detection system increases colonoscopic polyp and adenoma detection rates: a prospective randomised controlled study

(2019) Pu Wang et al.   GUT

A blood-based prognostic biomarker in IBD

(2019) Daniele Biasci et al.   GUT

Comparing deep belief networks with support vector machines for classifying gene expression data from complex disorders

(2019) Johannes Smolander et al.   FEBS Open Bio

Three-Dimensional Nanoscale Nuclear Architecture Mapping of Rectal Biopsies Detects Colorectal Neoplasia in Patients with Inflammatory Bowel Disease

(2019) Shikhar Uttam et al.   Cancer Prevention Research

Mass cytometry reveals systemic and local immune signatures that distinguish inflammatory bowel diseases

(2019) Samuel J. S. Rubin et al.   Nature Communications

Comparative performances of machine learning methods for classifying Crohn Disease patients using genome-wide genotyping data

(2019) Alberto Romagnoni et al.   Scientific Reports

The Role of Genetic Factors in Characterizing Extra-Intestinal Manifestations in Crohn’s Disease Patients: Are Bayesian Machine Learning Methods Improving Outcome Predictions?

(2019) Daniele Bottigliengo et al.   Journal of Clinical Medicine

Identifying Crohn’s disease signal from variome analysis

(2019) Yanran Wang et al.   Genome Medicine

Deep learning algorithms for automated detection of Crohn’s disease ulcers by video capsule endoscopy

(2019) Eyal Klang et al.   GASTROINTESTINAL ENDOSCOPY

A novel surgical predictive model for Chinese Crohnʼs disease patients

(2019) Yuan Dong et al.   MEDICINE

Biomarker discovery in inflammatory bowel diseases using network-based feature selection

(2019) Mostafa Abbas et al.   PLoS One

Artificial Intelligence-Assisted Polyp Detection for Colonoscopy: Initial Experience

(2018) Masashi Misawa et al.   GASTROENTEROLOGY

Predicting and explaining inflammation in Crohn’s disease patients using predictive analytics methods and electronic medical record data

(2018) Bhargava K Reddy et al.   Health Informatics Journal

Robust Microbial Markers for Non-Invasive Inflammatory Bowel Disease Identification

(2018) Benjamin Wingfield et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

Predicting Corticosteroid-Free Biologic Remission with Vedolizumab in Crohn’s Disease

(2018) Akbar K Waljee et al.   INFLAMMATORY BOWEL DISEASES

Multi-omics differentially classify disease state and treatment outcome in pediatric Crohn’s disease

(2018) Gavin M. Douglas et al.   Microbiome

Colonic microRNA Profiles, Identified by a Deep-learning Algorithm, That Predict Responses of Patients With Acute Severe Ulcerative Colitis to Therapy

(2018) Ian Morilla et al.   Clinical Gastroenterology and Hepatology

Emerging Therapies for Inflammatory Bowel Disease

(2018) Roni Weisshof et al.   ADVANCES IN THERAPY

Multiomics Analyses to Deliver the Most Effective Treatment to Every Patient With Inflammatory Bowel Disease

(2018) Rinse K. Weersma et al.   GASTROENTEROLOGY

Curved planar reformatting and convolutional neural network-based segmentation of the small bowel for visualization and quantitative assessment of pediatric Crohn's disease from MRI

(2018) Yechiel Lamash et al.   JOURNAL OF MAGNETIC RESONANCE IMAGING

Artificial intelligence, machine learning and health systems

(2018) Trishan Panch et al.   Journal of Global Health

Automatic detection of erosions and ulcerations in wireless capsule endoscopy images based on a deep convolutional neural network

(2018) Tomonori Aoki et al.   GASTROINTESTINAL ENDOSCOPY

Fully automated diagnostic system with artificial intelligence using endocytoscopy to identify the presence of histologic inflammation associated with ulcerative colitis (with video)

(2018) Yasuharu Maeda et al.   GASTROINTESTINAL ENDOSCOPY

Novel computer-assisted diagnosis system for endoscopic disease activity in patients with ulcerative colitis

(2018) Tsuyoshi Ozawa et al.   GASTROINTESTINAL ENDOSCOPY

CAGI4 Crohn's exome challenge: Marker SNP versus exome variant models for assigning risk of Crohn disease

(2017) Lipika R. Pal et al.   HUMAN MUTATION

Working toward precision medicine: Predicting phenotypes from exomes in the Critical Assessment of Genome Interpretation (CAGI) challenges

(2017) Roxana Daneshjou et al.   HUMAN MUTATION

Predicting Hospitalization and Outpatient Corticosteroid Use in Inflammatory Bowel Disease Patients Using Machine Learning

(2017) Akbar K Waljee et al.   INFLAMMATORY BOWEL DISEASES

Inflammatory Bowel Diseases

(2017) Kimberley W. J. van der Sloot et al.   INFLAMMATORY BOWEL DISEASES

Machine Learning–Based Gene Prioritization Identifies Novel Candidate Risk Genes for Inflammatory Bowel Disease

(2017) Ofer Isakov et al.   INFLAMMATORY BOWEL DISEASES

Machine Learning Algorithms for Objective Remission and Clinical Outcomes with Thiopurines

(2017) Akbar K. Waljee et al.   Journal of Crohns & Colitis

Worldwide incidence and prevalence of inflammatory bowel disease in the 21st century: a systematic review of population-based studies

(2017) Siew C Ng et al.   LANCET

Environmental triggers in IBD: a review of progress and evidence

(2017) Ashwin N. Ananthakrishnan et al.   Nature Reviews Gastroenterology & Hepatology

The IBD interactome: an integrated view of aetiology, pathogenesis and therapy

(2017) Heitor S. P. de Souza et al.   Nature Reviews Gastroenterology & Hepatology

Current and emerging therapeutic targets for IBD

(2017) Markus F. Neurath   Nature Reviews Gastroenterology & Hepatology

Classification of Paediatric Inflammatory Bowel Disease using Machine Learning

(2017) E. Mossotto et al.   Scientific Reports

Identification of Candidate Genes Related to Inflammatory Bowel Disease Using Minimum Redundancy Maximum Relevance, Incremental Feature Selection, and the Shortest-Path Approach

(2017) Fei Yuan et al.   Biomed Research International

The Role of Environmental Factors in the Pathogenesis of Inflammatory Bowel Diseases

(2017) Dror S. Shouval et al.   JAMA Pediatrics

Ulcerative Colitis Endoscopic Index of Severity (UCEIS) versus Mayo Endoscopic Score (MES) in guiding the need for colectomy in patients with acute severe colitis

(2017) Tingbin Xie et al.   Gastroenterology Report

Active learning based segmentation of Crohns disease from abdominal MRI

(2016) Dwarikanath Mahapatra et al.   COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE

Development of an Inflammatory Bowel Disease Research Registry Derived from Observational Electronic Health Record Data for Comprehensive Clinical Phenotyping

(2016) Alyce J. M. Anderson et al.   DIGESTIVE DISEASES AND SCIENCES

Demographic and Clinical Predictors of High Healthcare Use in Patients with Inflammatory Bowel Disease

(2016) Benjamin Click et al.   INFLAMMATORY BOWEL DISEASES

Systematic Review and Meta-analysis: Phenotype and Clinical Outcomes of Older-onset Inflammatory Bowel Disease

(2016) Ashwin N. Ananthakrishnan et al.   Journal of Crohns & Colitis

Heterogeneity in endoscopic treatment of Crohn’s disease-associated strictures: An international inflammatory bowel disease specialist survey

(2016) Dominik Bettenworth et al.   JOURNAL OF GASTROENTEROLOGY

Potential of hybrid adaptive filtering in inflammatory lesion detection from capsule endoscopy images

(2016) Vasileios S Charisis et al.   WORLD JOURNAL OF GASTROENTEROLOGY

Disease Activity Assessment in IBD

(2015) James D. Falvey et al.   INFLAMMATORY BOWEL DISEASES

Sparse Modeling Reveals miRNA Signatures for Diagnostics of Inflammatory Bowel Disease

(2015) Matthias Hübenthal et al.   PLoS One

Differential diagnosis in inflammatory bowel disease colitis: State of the art and future perspectives

(2015) Gian Eugenio Tontini   WORLD JOURNAL OF GASTROENTEROLOGY

Histologic Evaluation of Ulcerative Colitis

(2014) Mahmoud H. Mosli et al.   INFLAMMATORY BOWEL DISEASES

Large Sample Size, Wide Variant Spectrum, and Advanced Machine-Learning Technique Boost Risk Prediction for Inflammatory Bowel Disease

(2013) Zhi Wei et al.   AMERICAN JOURNAL OF HUMAN GENETICS

Alignment-free supervised classification of metagenomes by recursive SVM

(2013) Hongfei Cui et al.   BMC GENOMICS

Fecal Calprotectin More Accurately Reflects Endoscopic Activity of Ulcerative Colitis than the Lichtiger Index, C-reactive Protein, Platelets, Hemoglobin, and Blood Leukocytes

(2013) Alain M. Schoepfer et al.   INFLAMMATORY BOWEL DISEASES

Classification of inflammatory bowel diseases by means of Raman spectroscopic imaging of epithelium cells

(2012) Christiane Bielecki et al.   JOURNAL OF BIOMEDICAL OPTICS

Genome-Wide Maps of Circulating miRNA Biomarkers for Ulcerative Colitis

(2012) Radha Duttagupta et al.   PLoS One

Assessment of Crohn’s Disease Lesions in Wireless Capsule Endoscopy Images

(2011) R. Kumar et al.   IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING

Algorithms Outperform Metabolite Tests in Predicting Response of Patients With Inflammatory Bowel Disease to Thiopurines

(2009) Akbar K. Waljee et al.   Clinical Gastroenterology and Hepatology

Statistical challenges of high-dimensional data

(2009) I. M. Johnstone et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY A-MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES

Review article: treatment algorithms to maximize remission and minimize corticosteroid dependence in patients with inflammatory bowel disease

(2008) R. PANACCIONE et al.   ALIMENTARY PHARMACOLOGY & THERAPEUTICS

Relationships Between Disease Activity and Serum and Fecal Biomarkers in Patients With Crohn's Disease

(2008) Jennifer Jones et al.   Clinical Gastroenterology and Hepatology

Use of the noninvasive components of the mayo score to assess clinical response in Ulcerative Colitis

(2008) James D. Lewis et al.   INFLAMMATORY BOWEL DISEASES