Geometric deep learning enables 3D kinematic profiling across species and environments

Revealing the structure of pharmacobehavioral space through motion sequencing

(2020) Alexander B. Wiltschko et al.   NATURE NEUROSCIENCE

Automated markerless pose estimation in freely moving macaques with OpenMonkeyStudio

(2020) Praneet C. Bala et al.   Nature Communications

Continuous Whole-Body 3D Kinematic Recordings across the Rodent Behavioral Repertoire

(2020) Jesse D. Marshall et al.   NEURON

The Amphetamine Induced Rotation Test: A Re-Assessment of Its Use as a Tool to Monitor Motor Impairment and Functional Recovery in Rodent Models of Parkinson’s Disease

(2019) Anders Björklund et al.   Journal of Parkinsons Disease

Using DeepLabCut for 3D markerless pose estimation across species and behaviors

(2019) Tanmay Nath et al.   Nature Protocols

Layer-specific integration of locomotion and sensory information in mouse barrel cortex

(2019) Aslı Ayaz et al.   Nature Communications

DeepPoseKit, a software toolkit for fast and robust animal pose estimation using deep learning

(2019) Jacob M Graving et al.   eLife

DeepFly3D, a deep learning-based approach for 3D limb and appendage tracking in tethered, adult Drosophila

(2019) Semih Günel et al.   eLife

The Striatum Organizes 3D Behavior via Moment-to-Moment Action Selection

(2018) Jeffrey E. Markowitz et al.   CELL

DeepLabCut: markerless pose estimation of user-defined body parts with deep learning

(2018) Alexander Mathis et al.   NATURE NEUROSCIENCE

Fast animal pose estimation using deep neural networks

(2018) Talmo D. Pereira et al.   NATURE METHODS

Efficient cortical coding of 3D posture in freely behaving rats

(2018) Bartul Mimica et al.   SCIENCE

Marmosets: A Neuroscientific Model of Human Social Behavior

(2016) Cory T. Miller et al.   NEURON

Neurobiology of rodent self-grooming and its value for translational neuroscience

(2015) Allan V. Kalueff et al.   NATURE REVIEWS NEUROSCIENCE

Mapping Sub-Second Structure in Mouse Behavior

(2015) Alexander B. Wiltschko et al.   NEURON

Automated measurement of mouse social behaviors using depth sensing, video tracking, and machine learning

(2015) Weizhe Hong et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Peromyscus mice as a model for studying natural variation

(2015) Nicole L Bedford et al.   eLife

Human3.6M: Large Scale Datasets and Predictive Methods for 3D Human Sensing in Natural Environments

(2014) Catalin Ionescu et al.   IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE

Mapping the stereotyped behaviour of freely moving fruit flies

(2014) G. J. Berman et al.   Journal of the Royal Society Interface

Automated image-based tracking and its application in ecology

(2014) Anthony I. Dell et al.   TRENDS IN ECOLOGY & EVOLUTION

Flow of Cortical Activity Underlying a Tactile Decision in Mice

(2013) Zengcai V. Guo et al.   NEURON

Choice-specific sequences in parietal cortex during a virtual-navigation decision task

(2012) Christopher D. Harvey et al.   NATURE

Modulation of Visual Responses by Behavioral State in Mouse Visual Cortex

(2010) Cristopher M. Niell et al.   NEURON

HumanEva: Synchronized Video and Motion Capture Dataset and Baseline Algorithm for Evaluation of Articulated Human Motion

(2009) Leonid Sigal et al.   INTERNATIONAL JOURNAL OF COMPUTER VISION

Dimensionality and Dynamics in the Behavior of C. elegans

(2008) Greg J. Stephens et al.   PLoS Computational Biology