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An interactive web-based dashboard to track COVID-19 in real time

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The single-cell pathology landscape of breast cancer

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SciPy 1.0: fundamental algorithms for scientific computing in Python

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High-dimensional immune profiling by mass cytometry revealed immunosuppression and dysfunction of immunity in COVID-19 patients

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Multiplex digital spatial profiling of proteins and RNA in fixed tissue

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Single-cell landscape of bronchoalveolar immune cells in patients with COVID-19

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Histopathology and ultrastructural findings of fatal COVID-19 infections in Washington State: a case series

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Longitudinal analyses reveal immunological misfiring in severe COVID-19

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Deep immune profiling of COVID-19 patients reveals distinct immunotypes with therapeutic implications

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Impaired type I interferon activity and inflammatory responses in severe COVID-19 patients

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Sex differences in immune responses that underlie COVID-19 disease outcomes

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Array programming with NumPy

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A dynamic COVID-19 immune signature includes associations with poor prognosis

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Systems biological assessment of immunity to mild versus severe COVID-19 infection in humans

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Two distinct immunopathological profiles in autopsy lungs of COVID-19

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Pathophysiology of COVID-19-associated acute respiratory distress syndrome: a multicentre prospective observational study

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Prevalence of phenotypes of acute respiratory distress syndrome in critically ill patients with COVID-19: a prospective observational study

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Temporal and spatial heterogeneity of host response to SARS-CoV-2 pulmonary infection

(2020) Niyati Desai et al.   Nature Communications

ilastik: interactive machine learning for (bio)image analysis

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CellProfiler 3.0: Next-generation image processing for biology

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Highly multiplexed imaging of tumor tissues with subcellular resolution by mass cytometry

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scikit-image: image processing in Python

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Automated detection of slum area change in Hyderabad, India using multitemporal satellite imagery

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Host Responses in Tissue Repair and Fibrosis

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