Breast tumours maintain a reservoir of subclonal diversity during expansion
Published 2021 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Breast tumours maintain a reservoir of subclonal diversity during expansion
Authors
Keywords
-
Journal
NATURE
Volume 592, Issue 7853, Pages 302-308
Publisher
Springer Science and Business Media LLC
Online
2021-03-25
DOI
10.1038/s41586-021-03357-x
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- The evolutionary history of 2,658 cancers
- (2020) Moritz Gerstung et al. NATURE
- SciPy 1.0: fundamental algorithms for scientific computing in Python
- (2020) Pauli Virtanen et al. NATURE METHODS
- Clonal Decomposition and DNA Replication States Defined by Scaled Single-Cell Genome Sequencing
- (2019) Emma Laks et al. CELL
- ape 5.0: an environment for modern phylogenetics and evolutionary analyses in R
- (2018) Emmanuel Paradis et al. BIOINFORMATICS
- Identification of Drivers of Aneuploidy in Breast Tumors
- (2018) Katherine Pfister et al. Cell Reports
- Genetic and transcriptional evolution alters cancer cell line drug response
- (2018) Uri Ben-David et al. NATURE
- The evolutionary landscape of colorectal tumorigenesis
- (2018) William Cross et al. Nature Ecology & Evolution
- GENCODE reference annotation for the human and mouse genomes
- (2018) Adam Frankish et al. NUCLEIC ACIDS RESEARCH
- Sequencing thousands of single-cell genomes with combinatorial indexing
- (2017) Sarah A Vitak et al. NATURE METHODS
- Scalable whole-genome single-cell library preparation without preamplification
- (2017) Hans Zahn et al. NATURE METHODS
- Salmon provides fast and bias-aware quantification of transcript expression
- (2017) Rob Patro et al. NATURE METHODS
- New library construction method for single-cell genomes
- (2017) Larry Xi et al. PLoS One
- Complex heatmaps reveal patterns and correlations in multidimensional genomic data
- (2016) Zuguang Gu et al. BIOINFORMATICS
- New paradigms in clonal evolution: punctuated equilibrium in cancer
- (2016) William CH Cross et al. JOURNAL OF PATHOLOGY
- vcfr: a package to manipulate and visualize variant call format data in R
- (2016) Brian J. Knaus et al. Molecular Ecology Resources
- Punctuated copy number evolution and clonal stasis in triple-negative breast cancer
- (2016) Ruli Gao et al. NATURE GENETICS
- Identification of neutral tumor evolution across cancer types
- (2016) Marc J Williams et al. NATURE GENETICS
- Highly multiplexed targeted DNA sequencing from single nuclei
- (2016) Marco L Leung et al. Nature Protocols
- ggtree: anrpackage for visualization and annotation of phylogenetic trees with their covariates and other associated data
- (2016) Guangchuang Yu et al. Methods in Ecology and Evolution
- DNA aneuploidy and breast cancer: a meta-analysis of 141,163 cases
- (2016) Jing Xu et al. Oncotarget
- A global reference for human genetic variation
- (2015) Richard A. Gibbs et al. NATURE
- Gene expression analysis identifies global gene dosage sensitivity in cancer
- (2015) Rudolf S N Fehrmann et al. NATURE GENETICS
- The Molecular Signatures Database Hallmark Gene Set Collection
- (2015) Arthur Liberzon et al. Cell Systems
- Clonal evolution in breast cancer revealed by single nucleus genome sequencing
- (2014) Yong Wang et al. NATURE
- Copynumber: Efficient algorithms for single- and multi-track copy number segmentation
- (2013) Gro Nilsen et al. BMC GENOMICS
- Punctuated Evolution of Prostate Cancer Genomes
- (2013) Sylvan C. Baca et al. CELL
- The causes and consequences of genetic heterogeneity in cancer evolution
- (2013) Rebecca A. Burrell et al. NATURE
- Sensitive detection of somatic point mutations in impure and heterogeneous cancer samples
- (2013) Kristian Cibulskis et al. NATURE BIOTECHNOLOGY
- Pan-cancer patterns of somatic copy number alteration
- (2013) Travis I Zack et al. NATURE GENETICS
- The Life History of 21 Breast Cancers
- (2012) Serena Nik-Zainal et al. CELL
- Absolute quantification of somatic DNA alterations in human cancer
- (2012) Scott L Carter et al. NATURE BIOTECHNOLOGY
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- Genome-wide copy number analysis of single cells
- (2012) Timour Baslan et al. Nature Protocols
- Causes and consequences of aneuploidy in cancer
- (2012) David J. Gordon et al. NATURE REVIEWS GENETICS
- Genome-Wide Detection of Single-Nucleotide and Copy-Number Variations of a Single Human Cell
- (2012) C. Zong et al. SCIENCE
- Tumour evolution inferred by single-cell sequencing
- (2011) Nicholas Navin et al. NATURE
- BEDTools: a flexible suite of utilities for comparing genomic features
- (2010) Aaron R. Quinlan et al. BIOINFORMATICS
- The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
- (2010) A. McKenna et al. GENOME RESEARCH
- ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data
- (2010) K. Wang et al. NUCLEIC ACIDS RESEARCH
- Allele-specific copy number analysis of tumors
- (2010) P. Van Loo et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationFind the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
Search