Simple sequence repeats drive genome plasticity and promote adaptive evolution in penaeid shrimp
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Title
Simple sequence repeats drive genome plasticity and promote adaptive evolution in penaeid shrimp
Authors
Keywords
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Journal
Communications Biology
Volume 4, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2021-02-11
DOI
10.1038/s42003-021-01716-y
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- Genomic resources and comparative analyses of two economical penaeid shrimp species, Marsupenaeus japonicus and Penaeus monodon
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- (2018) Jiao Cheng et al. ZOOLOGICA SCRIPTA
- Early Middle Triassic trace fossils from the Luoping Biota, southwestern China: Evidence of recovery from mass extinction
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- (2015) Etienne A. Thévenot et al. JOURNAL OF PROTEOME RESEARCH
- Transcriptome and Molecular Pathway Analysis of the Hepatopancreas in the Pacific White Shrimp Litopenaeus vannamei under Chronic Low-Salinity Stress
- (2015) Ke Chen et al. PLoS One
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- Identification and expression analysis of differentially expressed genes from shrimp (Penaeus monodon) in response to low salinity stress
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- (2011) Manfred G Grabherr et al. NATURE BIOTECHNOLOGY
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- (2010) E. F. Kirkness et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- TopHat: discovering splice junctions with RNA-Seq
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- edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
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- Automated eukaryotic gene structure annotation using EVidenceModeler and the Program to Assemble Spliced Alignments
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