Mutational signatures and heterogeneous host response revealed via large-scale characterization of SARS-CoV-2 genomic diversity
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Title
Mutational signatures and heterogeneous host response revealed via large-scale characterization of SARS-CoV-2 genomic diversity
Authors
Keywords
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Journal
iScience
Volume 24, Issue 2, Pages 102116
Publisher
Elsevier BV
Online
2021-01-29
DOI
10.1016/j.isci.2021.102116
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Note: Only part of the references are listed.- Genomic diversity of SARS-CoV-2 in Coronavirus Disease 2019 patients
- (2020) Zijie Shen et al. CLINICAL INFECTIOUS DISEASES
- Transmission dynamics and evolutionary history of 2019‐nCoV
- (2020) Xingguang Li et al. JOURNAL OF MEDICAL VIROLOGY
- The first 2019 novel coronavirus case in Nepal
- (2020) Anup Bastola et al. LANCET INFECTIOUS DISEASES
- The repertoire of mutational signatures in human cancer
- (2020) Ludmil B. Alexandrov et al. NATURE
- A new coronavirus associated with human respiratory disease in China
- (2020) Fan Wu et al. NATURE
- A pneumonia outbreak associated with a new coronavirus of probable bat origin
- (2020) Peng Zhou et al. NATURE
- On the origin and continuing evolution of SARS-CoV-2
- (2020) Xiaolu Tang et al. National Science Review
- Genomic Epidemiology of SARS-CoV-2 in Guangdong Province, China
- (2020) Jing Lu et al. CELL
- Molecular characterization of SARS-CoV-2 from the first case of COVID-19 in Italy
- (2020) M.R. Capobianchi et al. CLINICAL MICROBIOLOGY AND INFECTION
- Isolation of SARS-CoV-2-related coronavirus from Malayan pangolins
- (2020) Kangpeng Xiao et al. NATURE
- Virological assessment of hospitalized patients with COVID-2019
- (2020) Roman Wölfel et al. NATURE
- The proximal origin of SARS-CoV-2
- (2020) Kristian G. Andersen et al. NATURE MEDICINE
- Phylogenetic network analysis of SARS-CoV-2 genomes
- (2020) Peter Forster et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Evidence for host-dependent RNA editing in the transcriptome of SARS-CoV-2
- (2020) Salvatore Di Giorgio et al. Science Advances
- Variant analysis of SARS-CoV-2 genomes
- (2020) Takahiko Koyama et al. BULLETIN OF THE WORLD HEALTH ORGANIZATION
- Making Sense of Mutation: What D614G Means for the COVID-19 Pandemic Remains Unclear
- (2020) Nathan D. Grubaugh et al. CELL
- Tracking Changes in SARS-CoV-2 Spike: Evidence that D614G Increases Infectivity of the COVID-19 Virus
- (2020) Bette Korber et al. CELL
- Genomic surveillance reveals multiple introductions of SARS-CoV-2 into Northern California
- (2020) Xianding Deng et al. SCIENCE
- A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology
- (2020) Andrew Rambaut et al. Nature Microbiology
- Rampant C→U Hypermutation in the Genomes of SARS-CoV-2 and Other Coronaviruses: Causes and Consequences for Their Short- and Long-Term Evolutionary Trajectories
- (2020) P. Simmonds mSphere
- Emergence of genomic diversity and recurrent mutations in SARS-CoV-2
- (2020) Lucy van Dorp et al. INFECTION GENETICS AND EVOLUTION
- Exploring the genomic and proteomic variations of SARS-CoV-2 spike glycoprotein: A computational biology approach
- (2020) Syed Mohammad Lokman et al. INFECTION GENETICS AND EVOLUTION
- Spike mutation D614G alters SARS-CoV-2 fitness
- (2020) Jessica A. Plante et al. NATURE
- Tracking the COVID-19 pandemic in Australia using genomics
- (2020) Torsten Seemann et al. Nature Communications
- Genomic epidemiology of superspreading events in Austria reveals mutational dynamics and transmission properties of SARS-CoV-2
- (2020) Alexandra Popa et al. Science Translational Medicine
- GISAID: Global initiative on sharing all influenza data – from vision to reality
- (2017) Yuelong Shu et al. Eurosurveillance
- QSdpR: Viral quasispecies reconstruction via correlation clustering
- (2017) Somsubhra Barik et al. GENOMICS
- Mutational Signatures Are Critical for Proper Estimation of Purifying Selection Pressures in Cancer Somatic Mutation Data When Using the dN/dS Metric
- (2017) Jimmy Van den Eynden et al. Frontiers in Genetics
- Quantifying influenza virus diversity and transmission in humans
- (2016) Leo L M Poon et al. NATURE GENETICS
- Intra-host dynamics of Ebola virus during 2014
- (2016) Ming Ni et al. Nature Microbiology
- APOBEC3A cytidine deaminase induces RNA editing in monocytes and macrophages
- (2015) Shraddha Sharma et al. Nature Communications
- Reactive oxygen and nitrogen species during viral infections
- (2014) C. G. Molteni et al. FREE RADICAL RESEARCH
- Full-length haplotype reconstruction to infer the structure of heterogeneous virus populations
- (2014) Francesca Di Giallonardo et al. NUCLEIC ACIDS RESEARCH
- Viral Quasispecies Assembly via Maximal Clique Enumeration
- (2014) Armin Töpfer et al. PLoS Computational Biology
- Signatures of mutational processes in human cancer
- (2013) Ludmil B. Alexandrov et al. NATURE
- Topology of viral evolution
- (2013) J. M. Chan et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Viral Quasispecies Evolution
- (2012) E. Domingo et al. MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS
- MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space
- (2012) Fredrik Ronquist et al. SYSTEMATIC BIOLOGY
- Circulating Virus Load Determines the Size of Bottlenecks in Viral Populations Progressing within a Host
- (2012) Serafín Gutiérrez et al. PLoS Pathogens
- QuRe: software for viral quasispecies reconstruction from next-generation sequencing data
- (2011) Mattia C. F. Prosperi et al. BIOINFORMATICS
- Functions and Regulation of RNA Editing by ADAR Deaminases
- (2010) Kazuko Nishikura Annual Review of Biochemistry
- Viral escape mechanisms - escapology taught by viruses
- (2003) Michaela Lucas et al. INTERNATIONAL JOURNAL OF EXPERIMENTAL PATHOLOGY
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