Genome-Wide Integrated Analysis Revealed Functions of lncRNA–miRNA–mRNA Interaction in Growth of Intermuscular Bones in Megalobrama amblycephala
Published 2021 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Genome-Wide Integrated Analysis Revealed Functions of lncRNA–miRNA–mRNA Interaction in Growth of Intermuscular Bones in Megalobrama amblycephala
Authors
Keywords
-
Journal
Frontiers in Cell and Developmental Biology
Volume 8, Issue -, Pages -
Publisher
Frontiers Media SA
Online
2021-02-21
DOI
10.3389/fcell.2020.603815
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Cytochrome c phosphorylation: Control of mitochondrial electron transport chain flux and apoptosis
- (2020) Hasini A. Kalpage et al. INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY
- Comparative expression analysis of let-7 microRNAs during ovary development in Megalobrama amblycephala
- (2019) Tian Lan et al. FISH PHYSIOLOGY AND BIOCHEMISTRY
- Integrated analysis of RNA-seq and microRNA-seq depicts miRNA–mRNA networks involved in stripe patterns of Botia superciliaris skin
- (2019) Jian Zhou et al. FUNCTIONAL & INTEGRATIVE GENOMICS
- De novo assembly of the goldfish (Carassius auratus) genome and the evolution of genes after whole-genome duplication
- (2019) Zelin Chen et al. Science Advances
- Integrated analysis of long non-coding RNA and mRNA expression in different colored skin of koi carp
- (2019) Mingkun Luo et al. BMC GENOMICS
- Effects of long term antiprogestine mifepristone (RU486) exposure on sexually dimorphic lncRNA expression and gonadal masculinization in Nile tilapia (Oreochromis niloticus)
- (2019) Jing Cai et al. AQUATIC TOXICOLOGY
- Transcriptome profiling analysis of sex-based differentially expressed mRNAs and lncRNAs in the brains of mature zebrafish (Danio rerio)
- (2019) Wenliang Yuan et al. BMC GENOMICS
- CircNT5E acts as a sponge of microRNA-422a to promote glioblastoma tumorigenesis
- (2018) Renjie Wang et al. CANCER RESEARCH
- Mechanism of Bone Mineralization
- (2018) Monzur Murshed Cold Spring Harbor Perspectives in Medicine
- Runx2/Osterix and Zinc Uptake Synergize to Orchestrate Osteogenic Differentiation and Citrate Containing Bone Apatite Formation
- (2018) Xuekun Fu et al. Advanced Science
- Chromosomal-level assembly of yellow catfish genome using third-generation DNA sequencing and Hi-C analysis
- (2018) Gaorui Gong et al. GigaScience
- Non-coding RNAs Function as Immune Regulators in Teleost Fish
- (2018) Man Wang et al. Frontiers in Immunology
- Genetic parameter estimates for intermuscular bone in blunt snout bream (Megalobrama amblycephala) based on a microsatellite-based pedigree
- (2018) Xue-Mei Xiong et al. AQUACULTURE
- Evolution of Fish Let-7 MicroRNAs and Their Expression Correlated to Growth Development in Blunt Snout Bream
- (2017) Bo-Wen Zhao et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Comparative proteomic profiling of human osteoblast-derived extracellular matrices identifies proteins involved in mesenchymal stromal cell osteogenic differentiation and mineralization
- (2017) Marta Baroncelli et al. JOURNAL OF CELLULAR PHYSIOLOGY
- LncRNA SNHG12 regulates gastric cancer progression by acting as a molecular sponge of miR‑320
- (2017) Hanyun Zhang et al. Molecular Medicine Reports
- CPC2: a fast and accurate coding potential calculator based on sequence intrinsic features
- (2017) Yu-Jian Kang et al. NUCLEIC ACIDS RESEARCH
- The draft genome of blunt snout bream (Megalobrama amblycephala) reveals the development of intermuscular bone and adaptation to herbivorous diet
- (2017) Han Liu et al. GigaScience
- LPS-stimulated inflammation inhibits BMP-9-induced osteoblastic differentiation through crosstalk between BMP/MAPK and Smad signaling
- (2016) Lu Daigang et al. EXPERIMENTAL CELL RESEARCH
- MicroRNA-140-5p impairs zebrafish embryonic bone development via targeting BMP-2
- (2016) Shiquan Gan et al. FEBS LETTERS
- Transcript-level expression analysis of RNA-seq experiments with HISAT, StringTie and Ballgown
- (2016) Mihaela Pertea et al. Nature Protocols
- PacBio full-length transcriptome profiling of insect mitochondrial gene expression
- (2016) Shan Gao et al. RNA Biology
- A survey of the sorghum transcriptome using single-molecule long reads
- (2016) Salah E. Abdel-Ghany et al. Nature Communications
- Integrated analysis of mRNA-seq and miRNA-seq in the liver of Pelteobagrus vachelli in response to hypoxia
- (2016) Guosong Zhang et al. Scientific Reports
- Dynamic mRNA and miRNA expression analysis in response to intermuscular bone development of blunt snout bream (Megalobrama amblycephala)
- (2016) Shi-Ming Wan et al. Scientific Reports
- MicroRNA-24 Regulates Osteogenic Differentiation via Targeting T-Cell Factor-1
- (2015) Weigong Zhao et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Identification of MicroRNA for Intermuscular Bone Development in Blunt Snout Bream (Megalobrama amblycephala)
- (2015) Shi-Ming Wan et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- ceRNA in cancer: possible functions and clinical implications
- (2015) Xiaolong Qi et al. JOURNAL OF MEDICAL GENETICS
- Epigenetics and Its Role in Periodontal Diseases: A State-of-the-Art Review
- (2015) Lena Larsson et al. JOURNAL OF PERIODONTOLOGY
- Long non-coding RNAs: Novel links in respiratory diseases (Review)
- (2015) YANRU LIU et al. Molecular Medicine Reports
- The Pfam protein families database: towards a more sustainable future
- (2015) Robert D. Finn et al. NUCLEIC ACIDS RESEARCH
- Leveraging transcript quantification for fast computation of alternative splicing profiles
- (2015) Gael P. Alamancos et al. RNA
- LncRNA: A link between RNA and cancer
- (2014) Guodong Yang et al. Biochimica et Biophysica Acta-Gene Regulatory Mechanisms
- LoRDEC: accurate and efficient long read error correction
- (2014) Leena Salmela et al. BIOINFORMATICS
- PLEK: a tool for predicting long non-coding RNAs and messenger RNAs based on an improved k-mer scheme
- (2014) Aimin Li et al. BMC BIOINFORMATICS
- Multifunctional ECM proteins in bone and teeth
- (2014) Sriram Ravindran et al. EXPERIMENTAL CELL RESEARCH
- Comparative analysis of intermuscular bones in three strains of common carp
- (2014) D.-C. Cao et al. JOURNAL OF APPLIED ICHTHYOLOGY
- AnimalTFDB 2.0: a resource for expression, prediction and functional study of animal transcription factors
- (2014) Hong-Mei Zhang et al. NUCLEIC ACIDS RESEARCH
- A single-molecule long-read survey of the human transcriptome
- (2013) Donald Sharon et al. NATURE BIOTECHNOLOGY
- Utilizing sequence intrinsic composition to classify protein-coding and long non-coding transcripts
- (2013) Liang Sun et al. NUCLEIC ACIDS RESEARCH
- Comparative analysis of intermuscular bones in fish of different ploidies
- (2013) Ling Li et al. Science China-Life Sciences
- The homology and origins of intermuscular bones in fishes: phylogenetic or biomechanical determinants?
- (2012) NICOLE DANOS et al. BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY
- miREvo: an integrative microRNA evolutionary analysis platform for next-generation sequencing experiments
- (2012) Ming Wen et al. BMC BIOINFORMATICS
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades
- (2011) Marc R. Friedländer et al. NUCLEIC ACIDS RESEARCH
- Adipocyte extracellular matrix composition, dynamics and role in obesity
- (2010) Edwin C. M. Mariman et al. CELLULAR AND MOLECULAR LIFE SCIENCES
- Gene ontology analysis for RNA-seq: accounting for selection bias
- (2010) Matthew D Young et al. GENOME BIOLOGY
- edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
- (2009) M. D. Robinson et al. BIOINFORMATICS
- Transfection of small RNAs globally perturbs gene regulation by endogenous microRNAs
- (2009) Aly A Khan et al. NATURE BIOTECHNOLOGY
- Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
- (2009) Ben Langmead et al. GENOME BIOLOGY
- Osteoclast–osteoblast communication
- (2008) Koichi Matsuo et al. ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS
- Functions of RANKL/RANK/OPG in bone modeling and remodeling
- (2008) Brendan F. Boyce et al. ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS
- Effect of zinc on gene expression in osteoblastic MC3T3-E1 cells: enhancement of Runx2, OPG, and regucalcin mRNA expressions
- (2008) Masayoshi Yamaguchi et al. MOLECULAR AND CELLULAR BIOCHEMISTRY
- Artificial miRNAs mitigate shRNA-mediated toxicity in the brain: Implications for the therapeutic development of RNAi
- (2008) J. L. McBride et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Gene Regulation by Transcription Factors and MicroRNAs
- (2008) O. Hobert SCIENCE
Create your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create NowBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started