Integrative Transcriptomic Network Analysis of Butyrate Treated Colorectal Cancer Cells
Published 2021 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Integrative Transcriptomic Network Analysis of Butyrate Treated Colorectal Cancer Cells
Authors
Keywords
-
Journal
Cancers
Volume 13, Issue 4, Pages 636
Publisher
MDPI AG
Online
2021-02-05
DOI
10.3390/cancers13040636
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- RNA Sequencing Analysis of Molecular Basis of Sodium Butyrate-Induced Growth Inhibition on Colorectal Cancer Cell Lines
- (2019) Qianwen Zhou et al. Biomed Research International
- Emerging roles of histone modifications and HDACs in RNA splicing
- (2019) Raneen Rahhal et al. NUCLEIC ACIDS RESEARCH
- ChEA3: transcription factor enrichment analysis by orthogonal omics integration
- (2019) Alexandra B Keenan et al. NUCLEIC ACIDS RESEARCH
- LINC01579 promotes cell proliferation by acting as a ceRNA of miR‐139‐5p to upregulate EIF4G2 expression in glioblastoma
- (2019) Yang Chai et al. JOURNAL OF CELLULAR PHYSIOLOGY
- The Abnormal Expression of MicroRNA-542-3p in Hepatocellular Carcinoma and Its Clinical Significance
- (2018) Xi Chen et al. DISEASE MARKERS
- Downregulation of miR-542-3p promotes cancer metastasis through activating TGF-β/Smad signaling in hepatocellular carcinoma
- (2018) Tong Zhang et al. OncoTargets and Therapy
- MicroRNA‑139‑5P inhibits human prostate cancer cell proliferation by targeting Notch1
- (2018) Qian Sun et al. Oncology Letters
- Global cancer statistics 2018: GLOBOCAN estimates of incidence and mortality worldwide for 36 cancers in 185 countries
- (2018) Freddie Bray et al. CA-A CANCER JOURNAL FOR CLINICIANS
- TransmiR v2.0: an updated transcription factor-microRNA regulation database
- (2018) Zhan Tong et al. NUCLEIC ACIDS RESEARCH
- miRTarBase update 2018: a resource for experimentally validated microRNA-target interactions
- (2017) Chih-Hung Chou et al. NUCLEIC ACIDS RESEARCH
- Upregulation of miR-542-3p inhibits the growth and invasion of human colon cancer cells through PI3K/AKT/survivin signaling
- (2017) Chuang Yang et al. ONCOLOGY REPORTS
- Modeling Physiological Events in 2D vs. 3D Cell Culture
- (2017) Kayla Duval et al. PHYSIOLOGY
- Potential role of miR-139-5p in cancer diagnosis, prognosis and therapy
- (2017) Ling-Li Huang et al. Oncology Letters
- Transcriptomic profiles of human foreskin fibroblast cells in response to orf virus
- (2017) Daxiang Chen et al. Oncotarget
- MiR-139-5p as a novel serum biomarker for recurrence and metastasis in colorectal cancer
- (2017) Jinsei Miyoshi et al. Scientific Reports
- Survivin: a unique target for tumor therapy
- (2016) Himani Garg et al. Cancer Cell International
- The Colonic Crypt Protects Stem Cells from Microbiota-Derived Metabolites
- (2016) Gerard E. Kaiko et al. CELL
- miR-542-3p inhibits the growth and invasion of colorectal cancer cells through targeted regulation of cortactin
- (2016) HAO-CHENG LONG et al. INTERNATIONAL JOURNAL OF MOLECULAR MEDICINE
- miR-542-3p suppresses colorectal cancer progression through targeting survivin
- (2016) Chunxiang Ye et al. Translational Cancer Research
- miR-139-5p Inhibits the Epithelial-Mesenchymal Transition and Enhances the Chemotherapeutic Sensitivity of Colorectal Cancer Cells by Downregulating BCL2
- (2016) Qingguo Li et al. Scientific Reports
- Butyrate inhibits pro-proliferative miR-92a by diminishing c-Myc-induced miR-17-92a cluster transcription in human colon cancer cells
- (2015) Shien Hu et al. Molecular Cancer
- NetworkAnalyst for statistical, visual and network-based meta-analysis of gene expression data
- (2015) Jianguo Xia et al. Nature Protocols
- miR-139-5p controls translation in myeloid leukemia through EIF4G2
- (2015) S Emmrich et al. ONCOGENE
- Predicting effective microRNA target sites in mammalian mRNAs
- (2015) Vikram Agarwal et al. eLife
- HTSeq--a Python framework to work with high-throughput sequencing data
- (2014) S. Anders et al. BIOINFORMATICS
- Trimmomatic: a flexible trimmer for Illumina sequence data
- (2014) Anthony M. Bolger et al. BIOINFORMATICS
- microRNA-139-5p exerts tumor suppressor function by targeting NOTCH1 in colorectal cancer
- (2014) Lijing Zhang et al. Molecular Cancer
- NetworkAnalyst - integrative approaches for protein–protein interaction network analysis and visual exploration
- (2014) Jianguo Xia et al. NUCLEIC ACIDS RESEARCH
- miRDB: an online resource for microRNA target prediction and functional annotations
- (2014) Nathan Wong et al. NUCLEIC ACIDS RESEARCH
- miR-18a Inhibits CDC42 and Plays a Tumour Suppressor Role in Colorectal Cancer Cells
- (2014) Karen J. Humphreys et al. PLoS One
- rMATS: Robust and flexible detection of differential alternative splicing from replicate RNA-Seq data
- (2014) Shihao Shen et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- MiR-139-5p inhibits migration and invasion of colorectal cancer by downregulating AMFR and NOTCH1
- (2014) Mingxu Song et al. Protein & Cell
- CluePedia Cytoscape plugin: pathway insights using integrated experimental and in silico data
- (2013) Gabriela Bindea et al. BIOINFORMATICS
- Familial Colorectal Cancer, Beyond Lynch Syndrome
- (2013) Elena M. Stoffel et al. Clinical Gastroenterology and Hepatology
- DIANA-microT web server v5.0: service integration into miRNA functional analysis workflows
- (2013) Maria D. Paraskevopoulou et al. NUCLEIC ACIDS RESEARCH
- Tumor-Suppressive Function of miR-139-5p in Esophageal Squamous Cell Carcinoma
- (2013) Ran Liu et al. PLoS One
- STAR: ultrafast universal RNA-seq aligner
- (2012) Alexander Dobin et al. BIOINFORMATICS
- Histone deacetylase inhibition in colorectal cancer cells reveals competing roles for members of the oncogenic miR-17-92 cluster
- (2012) Karen J. Humphreys et al. MOLECULAR CARCINOGENESIS
- Microbial Regulation of Glucose Metabolism and Cell-Cycle Progression in Mammalian Colonocytes
- (2012) Dallas R. Donohoe et al. PLoS One
- miR-92 is a key oncogenic component of the miR-17-92 cluster in colon cancer
- (2011) Akihiko Tsuchida et al. CANCER SCIENCE
- The Microbiome and Butyrate Regulate Energy Metabolism and Autophagy in the Mammalian Colon
- (2011) Dallas R. Donohoe et al. Cell Metabolism
- Prognostic values of the miR-17-92 cluster and its paralogs in colon cancer
- (2011) Ge Yu et al. JOURNAL OF SURGICAL ONCOLOGY
- Epigenetics and colorectal cancer
- (2011) Victoria Valinluck Lao et al. Nature Reviews Gastroenterology & Hepatology
- The Microbe-Derived Short Chain Fatty Acid Butyrate Targets miRNA-Dependent p21 Gene Expression in Human Colon Cancer
- (2011) Shien Hu et al. PLoS One
- Histone Deacetylase Activity Modulates Alternative Splicing
- (2011) Jarmila Hnilicová et al. PLoS One
- HDACs and HDAC inhibitors in colon cancer
- (2010) John M. Mariadason Epigenetics
- Induction of growth arrest by miR-542-3p that targets survivin
- (2010) Sena Yoon et al. FEBS LETTERS
- Differential expression of microRNAs in plasma of patients with colorectal cancer: a potential marker for colorectal cancer screening
- (2009) E K O Ng et al. GUT
- Colorectal Cancer Epidemiology: Incidence, Mortality, Survival, and Risk Factors
- (2009) Fatima Haggar et al. Clinics in Colon and Rectal Surgery
- miRecords: an integrated resource for microRNA-target interactions
- (2008) F. Xiao et al. NUCLEIC ACIDS RESEARCH
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExplorePublish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn More