Transgenerational conditioned male fertility of HD-ZIP IV transcription factor mutant ocl4: impact on 21-nt phasiRNA accumulation in pre-meiotic maize anthers

Oxygen, secreted proteins and small RNAs: mobile elements that govern anther development

(2021) Stefanie Dukowic-Schulze et al.   Plant Reproduction

Loss of function of Oryza sativa Argonaute 18 induces male sterility and reduction in phased small RNAs

(2020) Soumita Das et al.   Plant Reproduction

Dicer-like 5 deficiency confers temperature-sensitive male sterility in maize

(2020) Chong Teng et al.   Nature Communications

21-nt phasiRNAs direct target mRNA cleavage in rice male germ cells

(2020) Pengfei Jiang et al.   Nature Communications

Reproductive phasiRNAs regulate reprogramming of gene expression and meiotic progression in rice

(2020) Yu-Chan Zhang et al.   Nature Communications

24-nt reproductive phasiRNAs are broadly present in angiosperms

(2019) Rui Xia et al.   Nature Communications

Genome-wide identification of AGO18b-bound miRNAs and phasiRNAs in maize by cRIP-seq

(2019) Wei Sun et al.   BMC GENOMICS

Environmentally-Induced Transgenerational Epigenetic Inheritance: Implication of PIWI Interacting RNAs

(2019) Karine Casier et al.   Cells

Cis -directed cleavage and nonstoichiometric abundances of 21-nucleotide reproductive phased small interfering RNAs in grasses

(2018) Saleh Tamim et al.   NEW PHYTOLOGIST

Molecular Control of Male Fertility for Crop Hybrid Breeding

(2018) Yu-Jin Kim et al.   TRENDS IN PLANT SCIENCE

PANTHER version 14: more genomes, a new PANTHER GO-slim and improvements in enrichment analysis tools

(2018) Huaiyu Mi et al.   NUCLEIC ACIDS RESEARCH

Uncovering Male Fertility Transition Responsive miRNA in a Wheat Photo-Thermosensitive Genic Male Sterile Line by Deep Sequencing and Degradome Analysis

(2017) Jian-Fang Bai et al.   Frontiers in Plant Science

MS23, a master basic helix-loop-helix factor, regulates the specification and development of the tapetum in maize

(2016) Guo-Ling Nan et al.   DEVELOPMENT

PMS1T, producing phased small-interfering RNAs, regulates photoperiod-sensitive male sterility in rice

(2016) Yourong Fan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Chloroplasts in anther endothecium of Zea mays (Poaceae)

(2015) Katherine M. Murphy et al.   AMERICAN JOURNAL OF BOTANY

A dynamic evolutionary and functional landscape of plant phased small interfering RNAs

(2015) Yi Zheng et al.   BMC BIOLOGY

Spatiotemporally dynamic, cell-type–dependent premeiotic and meiotic phasiRNAs in maize anthers

(2015) Jixian Zhai et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Transgenerational Epigenetic Inheritance: Myths and Mechanisms

(2014) Edith Heard et al.   CELL

Maize germinal cell initials accommodate hypoxia and precociously express meiotic genes

(2014) Timothy Kelliher et al.   PLANT JOURNAL

Fine mapping and candidate gene analysis of the novel thermo-sensitive genic male sterility tms9-1 gene in rice

(2014) Yongbin Qi et al.   THEORETICAL AND APPLIED GENETICS

featureCounts: an efficient general purpose program for assigning sequence reads to genomic features

(2013) Y. Liao et al.   BIOINFORMATICS

DNA methylation changes in photoperiod-thermo-sensitive male sterile rice PA64S under two different conditions

(2013) Xiaojun Chen et al.   GENE

Cytological Characterization and Allelism Testing of Anther Developmental Mutants Identified in a Screen of Maize Male Sterile Lines

(2013) Ljudmilla Timofejeva et al.   G3-Genes Genomes Genetics

piRNAs Can Trigger a Multigenerational Epigenetic Memory in the Germline of C. elegans

(2012) Alyson Ashe et al.   CELL

Photoperiod- and thermo-sensitive genic male sterility in rice are caused by a point mutation in a novel noncoding RNA that produces a small RNA

(2012) Hai Zhou et al.   CELL RESEARCH

Maize multiple archesporial cells 1 (mac1), an ortholog of rice TDL1A, modulates cell proliferation and identity in early anther development

(2012) C.-J. R. Wang et al.   DEVELOPMENT

RNA-Directed DNA Methylation Is Involved in Regulating Photoperiod-Sensitive Male Sterility in Rice

(2012) Jihua Ding et al.   Molecular Plant

Mutation in CSA creates a new photoperiod-sensitive genic male sterile line applicable for hybrid rice seed production

(2012) H. Zhang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A long noncoding RNA regulates photoperiod-sensitive male sterility, an essential component of hybrid rice

(2012) J. Ding et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genome-Wide Characterization of the HD-ZIP IV Transcription Factor Family in Maize: Preferential Expression in the Epidermis

(2011) M. Javelle et al.   PLANT PHYSIOLOGY

PERSISTENT TAPETAL CELL1 Encodes a PHD-Finger Protein That Is Required for Tapetal Cell Death and Pollen Development in Rice

(2011) H. Li et al.   PLANT PHYSIOLOGY

Emergence and patterning of the five cell types of the Zea mays anther locule

(2010) Timothy Kelliher et al.   DEVELOPMENTAL BIOLOGY

Carbon Starved Anther Encodes a MYB Domain Protein That Regulates Sugar Partitioning Required for Rice Pollen Development

(2010) H. Zhang et al.   PLANT CELL

The Vpp1, Esr6a, Esr6b and OCL4 promoters are active in distinct domains of maize endosperm

(2010) Davide Sosso et al.   PLANT SCIENCE

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

Clusters and superclusters of phased small RNAs in the developing inflorescence of rice

(2009) C. Johnson et al.   GENOME RESEARCH

The HD-ZIP IV transcription factor OCL4 is necessary for trichome patterning and anther development in maize

(2009) Vanessa Vernoud et al.   PLANT JOURNAL

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY