Diverging patterns of introgression from Schistosoma bovis across S. haematobium African lineages

Divergence across mitochondrial genomes of sympatric members of the Schistosoma indicum group and clues into the evolution of Schistosoma spindale

(2020) Ben P. Jones et al.   Scientific Reports

Whole-genome sequence of the bovine blood fluke Schistosoma bovis supports interspecific hybridization with S. haematobium

(2019) Harald Oey et al.   PLoS Pathogens

Ancient hybridization and adaptive introgression of an invadolysin gene in schistosome parasites

(2019) Roy N Platt et al.   MOLECULAR BIOLOGY AND EVOLUTION

Hybridization speeds adaptive evolution in an eight-year field experiment

(2019) Nora Mitchell et al.   Scientific Reports

High-quality Schistosoma haematobium genome achieved by single-molecule and long-range sequencing

(2019) Andreas J Stroehlein et al.   GigaScience

Eukaryote hybrid genomes

(2019) Anna Runemark et al.   PLoS Genetics

No barrier breakdown between human and cattle schistosome species in the Senegal River Basin in the face of hybridisation

(2019) Nele A.M. Boon et al.   INTERNATIONAL JOURNAL FOR PARASITOLOGY

ape 5.0: an environment for modern phylogenetics and evolutionary analyses in R

(2018) Emmanuel Paradis et al.   BIOINFORMATICS

dartr : An r package to facilitate analysis of SNP data generated from reduced representation genome sequencing

(2018) Bernd Gruber et al.   Molecular Ecology Resources

The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update

(2018) Enis Afgan et al.   NUCLEIC ACIDS RESEARCH

Whole-genome resequencing reveals world-wide ancestry and adaptive introgression events of domesticated cattle in East Asia

(2018) Ningbo Chen et al.   Nature Communications

Occurrence of Schistosoma bovis on Pemba Island, Zanzibar: implications for urogenital schistosomiasis transmission monitoring

(2018) Tom Pennance et al.   PARASITOLOGY

Fine scale mapping of genomic introgressions within the Drosophila yakuba clade

(2017) David A. Turissini et al.   PLoS Genetics

Genomic signatures of adaptive introgression from European mouflon into domestic sheep

(2017) Mario Barbato et al.   Scientific Reports

Outbreak of urogenital schistosomiasis in Corsica (France): an epidemiological case study

(2016) Jérôme Boissier et al.   LANCET INFECTIOUS DISEASES

Signatures of Archaic Adaptive Introgression in Present-Day Human Populations

(2016) Fernando Racimo et al.   MOLECULAR BIOLOGY AND EVOLUTION

Evidence for archaic adaptive introgression in humans

(2015) Fernando Racimo et al.   NATURE REVIEWS GENETICS

Hybridization in Parasites: Consequences for Adaptive Evolution, Pathogenesis, and Public Health in a Changing World

(2015) Kayla C. King et al.   PLoS Pathogens

PopGenome: An Efficient Swiss Army Knife for Population Genomic Analyses in R

(2014) Bastian Pfeifer et al.   MOLECULAR BIOLOGY AND EVOLUTION

Hybridisation between the two major African schistosome species of humans

(2013) T. Huyse et al.   INTERNATIONAL JOURNAL FOR PARASITOLOGY

Adaptive introgression in animals: examples and comparison to new mutation and standing variation as sources of adaptive variation

(2013) Philip W. Hedrick   MOLECULAR ECOLOGY

Introgressive Hybridization of Schistosoma haematobium Group Species in Senegal: Species Barrier Break Down between Ruminant and Human Schistosomes

(2013) Bonnie L. Webster et al.   PLoS Neglected Tropical Diseases

Population genetic structure of Schistosoma mansoni and Schistosoma haematobium from across six sub-Saharan African countries: Implications for epidemiology, evolution and control

(2012) Charlotte M. Gower et al.   ACTA TROPICA

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Schistosomiasis collection at NHM (SCAN)

(2012) Aidan M Emery et al.   Parasites & Vectors

The variant call format and VCFtools

(2011) P. Danecek et al.   BIOINFORMATICS

Next-generation hybridization and introgression

(2011) A D Twyford et al.   HEREDITY

Integrative genomics viewer

(2011) James T Robinson et al.   NATURE BIOTECHNOLOGY

A framework for variation discovery and genotyping using next-generation DNA sequencing data

(2011) Mark A DePristo et al.   NATURE GENETICS

An Infectious Topic in Reticulate Evolution: Introgression and Hybridization in Animal Parasites

(2010) Jillian T. Detwiler et al.   Genes

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

The NIH-NIAID Schistosomiasis Resource Center

(2008) Fred A. Lewis et al.   PLoS Neglected Tropical Diseases