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Title
Mapping circular RNA structures in living cells by SHAPE-MaP
Authors
Keywords
Circular RNA, Secondary structure, Living cell, SHAPE-MaP
Journal
METHODS
Volume -, Issue -, Pages -
Publisher
Elsevier BV
Online
2021-02-10
DOI
10.1016/j.ymeth.2021.01.011
References
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Related references
Note: Only part of the references are listed.- Structure-Mediated RNA Decay by UPF1 and G3BP1
- (2020) Joseph W. Fischer et al. MOLECULAR CELL
- Biogenesis and Functions of Circular RNAs Come into Focus
- (2020) Mei-Sheng Xiao et al. TRENDS IN CELL BIOLOGY
- The expanding regulatory mechanisms and cellular functions of circular RNAs
- (2020) Ling-Ling Chen NATURE REVIEWS MOLECULAR CELL BIOLOGY
- The molecular structure of long non-coding RNAs: emerging patterns and functional implications
- (2020) Isabel Chillón et al. CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY
- Structure and Degradation of Circular RNAs Regulate PKR Activation in Innate Immunity
- (2019) Chu-Xiao Liu et al. CELL
- The Biogenesis, Functions, and Challenges of Circular RNAs
- (2018) Xiang Li et al. MOLECULAR CELL
- Accurate detection of chemical modifications in RNA by mutational profiling (MaP) with ShapeMapper 2
- (2017) Steven Busan et al. RNA
- Transcriptome-wide interrogation of RNA secondary structure in living cells with icSHAPE
- (2016) Ryan A Flynn et al. Nature Protocols
- Comparison of SHAPE reagents for mapping RNA structures inside living cells
- (2016) Byron Lee et al. RNA
- Circular non-coding RNA ANRIL modulates ribosomal RNA maturation and atherosclerosis in humans
- (2016) Lesca M. Holdt et al. Nature Communications
- Selective 2′-hydroxyl acylation analyzed by primer extension and mutational profiling (SHAPE-MaP) for direct, versatile and accurate RNA structure analysis
- (2015) Matthew J Smola et al. Nature Protocols
- Functionally conserved architecture of hepatitis C virus RNA genomes
- (2015) David M. Mauger et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Genome-wide mapping of RNA structure using nuclease digestion and high-throughput sequencing
- (2013) Yue Wan et al. Nature Protocols
- RNA SHAPE analysis in living cells
- (2012) Robert C Spitale et al. Nature Chemical Biology
- Exploring RNA Structural Codes with SHAPE Chemistry
- (2011) Kevin M. Weeks et al. ACCOUNTS OF CHEMICAL RESEARCH
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