Oviduct as a sensor of embryo quality: deciphering the extracellular vesicle (EV)-mediated embryo-maternal dialogue

The Oviductal Extracellular Vesicles’ RNA Cargo Regulates the Bovine Embryonic Transcriptome

(2020) Stefan Bauersachs et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Individually cultured bovine embryos produce extracellular vesicles that have the potential to be used as non-invasive embryo quality markers

(2020) Keerthie Dissanayake et al.   THERIOGENOLOGY

Gene expression and metabolic response of bovine oviduct epithelial cells to the early embryo

(2019) Meriem Hamdi et al.   REPRODUCTION

Graph-based genome alignment and genotyping with HISAT2 and HISAT-genotype

(2019) Daehwan Kim et al.   NATURE BIOTECHNOLOGY

Specific trophoblast transcripts transferred by extracellular vesicles affect gene expression in endometrial epithelial cells and may have a role in embryo-maternal crosstalk

(2019) Masoumeh Es-Haghi et al.   Cell Communication and Signaling

Oviduct epithelium induces interferon-tau in bovine Day-4 embryos, which generates an anti-inflammatory response in immune cells

(2018) Anup K. Talukder et al.   Scientific Reports

Blastocyst-induced changes in the bovine endometrial transcriptome

(2018) C Passaro et al.   REPRODUCTION

Invitro culture and non-invasive metabolic profiling of single bovine embryos

(2018) Monika N�mm et al.   REPRODUCTION FERTILITY AND DEVELOPMENT

Isolation and Characterization of Functionally Active Extracellular Vesicles from Culture Medium Conditioned by Bovine Embryos In Vitro

(2018) Krishna Pavani et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Cellular uptake of extracellular vesicles is mediated by clathrin-independent endocytosis and macropinocytosis

(2017) Helena Costa Verdera et al.   JOURNAL OF CONTROLLED RELEASE

Identification and characteristics of extracellular vesicles from bovine blastocysts produced in vitro

(2017) Edwin A. Mellisho et al.   PLoS One

Small extracellular vesicles secreted from senescent cells promote cancer cell proliferation through EphA2

(2017) Masaki Takasugi et al.   Nature Communications

Effects of embryo-derived exosomes on the development of bovine cloned embryos

(2017) Pengxiang Qu et al.   PLoS One

Secretome of in vitro cultured human embryos contains extracellular vesicles that are uptaken by the maternal side

(2017) Elisa Giacomini et al.   Scientific Reports

The Equine Embryo Influences Immune-Related Gene Expression in the Oviduct1

(2016) Katrien Smits et al.   BIOLOGY OF REPRODUCTION

Communication by Extracellular Vesicles: Where We Are and Where We Need to Go

(2016) Mercedes Tkach et al.   CELL

KEGG: new perspectives on genomes, pathways, diseases and drugs

(2016) Minoru Kanehisa et al.   NUCLEIC ACIDS RESEARCH

Extracellular Vesicles from BOEC in In Vitro Embryo Development and Quality

(2016) Ricaurte Lopera-Vásquez et al.   PLoS One

Extracellular vesicles and viruses: Are they close relatives?

(2016) Esther Nolte-‘t Hoen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Oviduct-Embryo Interactions in Cattle: Two-Way Traffic or a One-Way Street?1

(2015) Veronica Maillo et al.   BIOLOGY OF REPRODUCTION

Early bovine embryos regulate oviduct epithelial cell gene expression during in vitro co-culture

(2014) Barbara Schmaltz-Panneau et al.   ANIMAL REPRODUCTION SCIENCE

Genome activation in bovine embryos: Review of the literature and new insights from RNA sequencing experiments

(2014) Alexander Graf et al.   ANIMAL REPRODUCTION SCIENCE

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

The Human Endometrium as a Sensor of Embryo Quality1

(2014) Nick S. Macklon et al.   BIOLOGY OF REPRODUCTION

Exosomes as divine messengers: are they the Hermes of modern molecular oncology?

(2014) C Braicu et al.   CELL DEATH AND DIFFERENTIATION

Improvement of Cloned Embryos Development by Co-Culturing with Parthenotes: A Possible Role of Exosomes/Microvesicles for Embryos Paracrine Communication

(2014) Islam M. Saadeldin et al.   Cellular Reprogramming

Munc13-4 Regulates Granule Secretion in Human Neutrophils

(2014) C. Pivot-Pajot et al.   JOURNAL OF IMMUNOLOGY

Full-length RNA-seq from single cells using Smart-seq2

(2014) Simone Picelli et al.   Nature Protocols

Development rate and gene expression of IVP bovine embryos cocultured with bovine oviduct epithelial cells at early or late stage of preimplantation development

(2014) A. Cordova et al.   THERIOGENOLOGY

featureCounts: an efficient general purpose program for assigning sequence reads to genomic features

(2013) Y. Liao et al.   BIOINFORMATICS

Primer-BLAST: A tool to design target-specific primers for polymerase chain reaction

(2012) Jian Ye et al.   BMC BIOINFORMATICS

clusterProfiler: an R Package for Comparing Biological Themes Among Gene Clusters

(2012) Guangchuang Yu et al.   OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY

Early Developing Pig Embryos Mediate Their Own Environment in the Maternal Tract

(2012) Carmen Almiñana et al.   PLoS One

Roles of the oviduct in mammalian fertilization

(2012) P Coy et al.   REPRODUCTION

Role of the Oviduct in Early Embryo Development

(2012) U Besenfelder et al.   REPRODUCTION IN DOMESTIC ANIMALS

Control of NOD2 and Rip2-dependent innate immune activation by GEF-H1

(2011) Yun Zhao et al.   INFLAMMATORY BOWEL DISEASES

Dynamic changes in gene expression during human early embryo development: from fundamental aspects to clinical applications

(2010) S. Assou et al.   HUMAN REPRODUCTION UPDATE

Interferon-Stimulated Gene 15 and the Protein ISGylation System

(2010) Dongxian Zhang et al.   JOURNAL OF INTERFERON AND CYTOKINE RESEARCH

Cellular Internalization of Exosomes Occurs Through Phagocytosis

(2010) Du Feng et al.   TRAFFIC

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Biomarkers for epithelial-mesenchymal transitions

(2009) Michael Zeisberg et al.   JOURNAL OF CLINICAL INVESTIGATION

Endometrium as an early sensor of in vitro embryo manipulation technologies

(2009) N. Mansouri-Attia et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The endometrium responds differently to cloned versus fertilized embryos

(2009) S. Bauersachs et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Permanent embryo arrest: molecular and cellular concepts

(2008) D.H. Betts et al.   MOLECULAR HUMAN REPRODUCTION

Cellular functions of GEF-H1, a microtubule-regulated Rho-GEF: is altered GEF-H1 activity a crucial determinant of disease pathogenesis?

(2008) Jörg Birkenfeld et al.   TRENDS IN CELL BIOLOGY