Single cell transcriptomics of the developing zebrafish lens and identification of putative controllers of lens development

Rapamycin relieves the cataract caused by ablation of Gja8b through stimulating autophagy in zebrafish

(2021) Xiyuan Ping et al.   Autophagy

Rbm24 controls poly(A) tail length and translation efficiency of crystallin mRNAs in the lens via cytoplasmic polyadenylation

(2020) Ming Shao et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The HMG box transcription factors Sox1a and Sox1b specify a new class of glycinergic interneuron in the spinal cord of zebrafish embryos

(2019) Vanessa Gerber et al.   DEVELOPMENT

The master transcription factor SOX2, mutated in anophthalmia/microphthalmia, is post-transcriptionally regulated by the conserved RNA-binding protein RBM24 in vertebrate eye development

(2019) Soma Dash et al.   HUMAN MOLECULAR GENETICS

A comprehensive spatial-temporal transcriptomic analysis of differentiating nascent mouse lens epithelial and fiber cells

(2018) Yilin Zhao et al.   EXPERIMENTAL EYE RESEARCH

Developmental expression of the zebrafish Arf-like small GTPase paralogs arl13a and arl1 3b

(2018) Ping Song et al.   GENE EXPRESSION PATTERNS

A zebrafish model of foxe3 deficiency demonstrates lens and eye defects with dysregulation of key genes involved in cataract formation in humans

(2018) M. Krall et al.   HUMAN GENETICS

Soluble syntaxin 3 functions as a transcriptional regulator

(2018) Adrian J. Giovannone et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Human La binds mRNAs through contacts to the poly(A) tail

(2018) Jyotsna Vinayak et al.   NUCLEIC ACIDS RESEARCH

The RNA-binding protein Celf1 post-transcriptionally regulates p27Kip1 and Dnase2b to control fiber cell nuclear degradation in lens development

(2018) Archana D. Siddam et al.   PLoS Genetics

Expression patterns of Rbm24 in lens, nasal epithelium and inner ear during mouse embryonic development

(2018) Raphaëlle Grifone et al.   DEVELOPMENTAL DYNAMICS

Proteome-transcriptome analysis and proteome remodeling in mouse lens epithelium and fibers

(2018) Yilin Zhao et al.   EXPERIMENTAL EYE RESEARCH

Embryonic expression patterns of Eukaryotic EndoU ribonuclease family gene endouC in zebrafish

(2017) Hung-Chieh Lee et al.   GENE EXPRESSION PATTERNS

Loss of αB-crystallin function in zebrafish reveals critical roles in the development of the lens and stress resistance of the heart

(2017) Sanjay Mishra et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

iSyTE 2.0: a database for expression-based gene discovery in the eye

(2017) Atul Kakrana et al.   NUCLEIC ACIDS RESEARCH

Signaling and Gene Regulatory Networks in Mammalian Lens Development

(2017) Ales Cvekl et al.   TRENDS IN GENETICS

The zebrafish as a model system for analyzing mammalian and native α-crystallin promoter function

(2017) Mason Posner et al.   PeerJ

CRISPR/Cas9 in zebrafish: an efficient combination for human genetic diseases modeling

(2016) Jiaqi Liu et al.   HUMAN GENETICS

Prox1 and fibroblast growth factor receptors form a novel regulatory loop controlling lens fiber differentiation and gene expression

(2015) Dylan S. Audette et al.   DEVELOPMENT

Deficiency of the RNA binding protein caprin2 causes lens defects and features of peters anomaly

(2015) Soma Dash et al.   DEVELOPMENTAL DYNAMICS

A conserved role of αA-crystallin in the development of the zebrafish embryonic lens

(2015) Ping Zou et al.   EXPERIMENTAL EYE RESEARCH

Compound mouse mutants of bZIP transcription factors Mafg and Mafk reveal a regulatory network of non-crystallin genes associated with cataract

(2015) Smriti A. Agrawal et al.   HUMAN GENETICS

Spatial reconstruction of single-cell gene expression data

(2015) Rahul Satija et al.   NATURE BIOTECHNOLOGY

The Aquaporin Zero Puzzle

(2014) James E. Hall et al.   BIOPHYSICAL JOURNAL

Wild Sex in Zebrafish: Loss of the Natural Sex Determinant in Domesticated Strains

(2014) C. A. Wilson et al.   GENETICS

A Dimerized HMX1 Inhibits EPHA6/epha4b in Mouse and Zebrafish Retinas

(2014) Fabienne Marcelli et al.   PLoS One

Lens β-crystallins: The role of deamidation and related modifications in aging and cataract

(2014) Kirsten J. Lampi et al.   PROGRESS IN BIOPHYSICS & MOLECULAR BIOLOGY

Loss of the small heat shock protein αA-crystallin does not lead to detectable defects in early zebrafish lens development

(2013) Mason Posner et al.   EXPERIMENTAL EYE RESEARCH

Interactome Analysis Reveals that C1QBP (complement component 1, q subcomponent binding protein) Is Associated with Cancer Cell Chemotaxis and Metastasis

(2013) Xiaofang Zhang et al.   MOLECULAR & CELLULAR PROTEOMICS

Fgf22 regulated by Fgf3/Fgf8 signaling is required for zebrafish midbrain development

(2013) A. Miyake et al.   Biology Open

Zebrafish HSF4: a novel protein that shares features of both HSF1 and HSF4 of mammals

(2012) Cynthia L. Swan et al.   CELL STRESS & CHAPERONES

The peripheral sensory nervous system in the vertebrate head: A gene regulatory perspective

(2012) Timothy Grocott et al.   DEVELOPMENTAL BIOLOGY

A role for γS-crystallin in the organization of actin and fiber cell maturation in the mouse lens

(2012) Jianguo Fan et al.   FEBS Journal

Cytoplasmic Poly(A) Binding Protein 4 Is Highly Expressed in Human Colorectal Cancer and Correlates with Better Prognosis

(2012) Dan Liu et al.   Journal of Genetics and Genomics

Integrin α5/fibronectin1 and focal adhesion kinase are required for lens fiber morphogenesis in zebrafish

(2012) Julie M. Hayes et al.   MOLECULAR BIOLOGY OF THE CELL

Translational inhibition by deadenylation-independent mechanisms is central to microRNA-mediated silencing in zebrafish

(2012) Y. Mishima et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

βA3/A1-crystallin is required for proper astrocyte template formation and vascular remodeling in the retina

(2012) Debasish Sinha et al.   TRANSGENIC RESEARCH

The genetics of ocular disorders: Insights from the zebrafish

(2011) Ann C. Morris   BIRTH DEFECTS RESEARCH PART C-EMBRYO TODAY-REVIEWS

Hmx4 regulates Sonic hedgehog signaling through control of retinoic acid synthesis during forebrain patterning

(2011) Patricia A. Gongal et al.   DEVELOPMENTAL BIOLOGY

Mutation in the  A3/A1-crystallin gene impairs phagosome degradation in the retinal pigmented epithelium of the rat

(2011) J. S. Zigler et al.   JOURNAL OF CELL SCIENCE

Mutations in the RNA Granule Component TDRD7 Cause Cataract and Glaucoma

(2011) S. A. Lachke et al.   SCIENCE

Uhrf1 and Dnmt1 are required for development and maintenance of the zebrafish lens

(2010) Rachel K. Tittle et al.   DEVELOPMENTAL BIOLOGY

Expression of ventral diencephalon-enriched genes in zebrafish

(2010) Sen Li et al.   DEVELOPMENTAL DYNAMICS

GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists

(2009) Eran Eden et al.   BMC BIOINFORMATICS

The zebrafish prospero homolog prox1 is required for mechanosensory hair cell differentiation and functionality in the lateral line

(2009) Anna Pistocchi et al.   BMC DEVELOPMENTAL BIOLOGY

Removal of Hsf4 leads to cataract development in mice through down-regulation of γS-crystallin and Bfsp expression

(2009) Xiaohe Shi et al.   BMC MOLECULAR BIOLOGY

Early lens development in the zebrafish: A three-dimensional time-lapse analysis

(2009) Teri M.S. Greiling et al.   DEVELOPMENTAL DYNAMICS

Neither MafA/L-Maf nor MafB is essential for lens development in mice

(2009) Takashi Takeuchi et al.   GENES TO CELLS

Molecular diversity and genomic organisation of the α, β and γ eye lens crystallins from the Antarctic toothfish Dissostichus mawsoni

(2008) Andor J. Kiss et al.   Comparative Biochemistry and Physiology D-Genomics & Proteomics

Identification and expression pattern of zebrafishprox2during embryonic development

(2008) Anna Pistocchi et al.   DEVELOPMENTAL DYNAMICS

Persistent FoxE3 Expression Blocks Cytoskeletal Remodeling and Organelle Degradation during Lens Fiber Differentiation

(2008) H. Landgren et al.   INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE

βA3/A1-crystallin in astroglial cells regulates retinal vascular remodeling during development

(2007) Debasish Sinha et al.   MOLECULAR AND CELLULAR NEUROSCIENCE