Evolution, expression and functional analysis of cultivated allotetraploid cotton DIR genes
Published 2021 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Evolution, expression and functional analysis of cultivated allotetraploid cotton DIR genes
Authors
Keywords
-
Journal
BMC PLANT BIOLOGY
Volume 21, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2021-02-11
DOI
10.1186/s12870-021-02859-0
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- TBtools: An Integrative Toolkit Developed for Interactive Analyses of Big Biological Data
- (2020) Chengjie Chen et al. Molecular Plant
- Genome-Wide Identification and Characterization of DIR Genes in Medicago truncatula
- (2019) Min Song et al. BIOCHEMICAL GENETICS
- Gossypium barbadense and Gossypium hirsutum genomes provide insights into the origin and evolution of allotetraploid cotton
- (2019) Yan Hu et al. NATURE GENETICS
- SignalP 5.0 improves signal peptide predictions using deep neural networks
- (2019) José Juan Almagro Armenteros et al. NATURE BIOTECHNOLOGY
- Interactive Tree Of Life (iTOL) v4: recent updates and new developments
- (2019) Ivica Letunic et al. NUCLEIC ACIDS RESEARCH
- Extensive intraspecific gene order and gene structural variations in upland cotton cultivars
- (2019) Zhaoen Yang et al. Nature Communications
- GhbHLH18 negatively regulates fiber strength and length by enhancing lignin biosynthesis in cotton fibers
- (2019) Zhengyin Gao et al. PLANT SCIENCE
- CDD/SPARCLE: the conserved domain database in 2020
- (2019) Shennan Lu et al. NUCLEIC ACIDS RESEARCH
- Reactive Oxygen Species in Plant Signaling
- (2018) Cezary Waszczak et al. Annual Review of Plant Biology
- Resequencing a core collection of upland cotton identifies genomic variation and loci influencing fiber quality and yield
- (2018) Zhiying Ma et al. NATURE GENETICS
- Resequencing of 243 diploid cotton accessions based on an updated A genome identifies the genetic basis of key agronomic traits
- (2018) Xiongming Du et al. NATURE GENETICS
- A genome-wide analysis of the flax (Linum usitatissimum L.) dirigent protein family: from gene identification and evolution to differential regulation
- (2018) Cyrielle Corbin et al. PLANT MOLECULAR BIOLOGY
- Genome-wide analysis of dirigent gene family in pepper (Capsicum annuum L.) and characterization of CaDIR7 in biotic and abiotic stresses
- (2018) Abid Khan et al. Scientific Reports
- Genetic Map Construction and Fiber Quality QTL Mapping Using the CottonSNP80K Array in Upland Cotton
- (2018) Zhaoyun Tan et al. Frontiers in Plant Science
- Molecular Characterization, Evolution, and Expression Profiling of the Dirigent (DIR) Family Genes in Chinese White Pear (Pyrus bretschneideri)
- (2018) Xi Cheng et al. Frontiers in Genetics
- HyPRP1 performs a role in negatively regulating cotton resistance to V. dahliae via the thickening of cell walls and ROS accumulation
- (2018) Jun Yang et al. BMC PLANT BIOLOGY
- Dirigent proteins in plants: modulating cell wall metabolism during abiotic and biotic stress exposure
- (2017) Candelas Paniagua et al. JOURNAL OF EXPERIMENTAL BOTANY
- JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework
- (2017) Aziz Khan et al. NUCLEIC ACIDS RESEARCH
- The Missing Link in Leguminous Pterocarpan Biosynthesis is a Dirigent Domain-Containing Protein with Isoflavanol Dehydratase Activity
- (2017) Kai Uchida et al. PLANT AND CELL PHYSIOLOGY
- A Novel Soybean Dirigent Gene GmDIR22 Contributes to Promotion of Lignan Biosynthesis and Enhances Resistance to Phytophthora sojae
- (2017) Ninghui Li et al. Frontiers in Plant Science
- Expression in Pichia pastoris and characterization of two novel dirigent proteins for atropselective formation of gossypol
- (2016) Isabelle Effenberger et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- Identification of stable quantitative trait loci (QTLs) for fiber quality traits across multiple environments in Gossypium hirsutum recombinant inbred line population
- (2016) Muhammad Jamshed et al. BMC GENOMICS
- Genome-wide analysis and environmental response profiling of dirigent family genes in rice (Oryza sativa)
- (2016) Yongrong Liao et al. Genes & Genomics
- MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets
- (2016) Sudhir Kumar et al. MOLECULAR BIOLOGY AND EVOLUTION
- Genetic Analysis and QTL Detection on Fiber Traits Using Two Recombinant Inbred Lines and Their Backcross Populations in Upland Cotton
- (2016) Lianguang Shang et al. G3-Genes Genomes Genetics
- Dirigent Proteins from Cotton (Gossypiumsp.) for the Atropselective Synthesis of Gossypol
- (2015) Isabelle Effenberger et al. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
- Dirigent Protein-Mediated Lignan and Cyanogenic Glucoside Formation in Flax Seed: Integrated Omics and MALDI Mass Spectrometry Imaging
- (2015) Doralyn S. Dalisay et al. JOURNAL OF NATURAL PRODUCTS
- Re-evaluating the phylogeny of allopolyploid Gossypium L.
- (2015) Corrinne E. Grover et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Sequencing of allotetraploid cotton (Gossypium hirsutum L. acc. TM-1) provides a resource for fiber improvement
- (2015) Tianzhen Zhang et al. NATURE BIOTECHNOLOGY
- Pinoresinol reductase 1 impacts lignin distribution during secondary cell wall biosynthesis in Arabidopsis
- (2015) Qiao Zhao et al. PHYTOCHEMISTRY
- Non-host disease resistance response in pea ( Pisum sativum ) pods: Biochemical function of DRR206 and phytoalexin pathway localization
- (2015) Herana Kamal Seneviratne et al. PHYTOCHEMISTRY
- Construction of genetic map and QTL analysis of fiber quality traits for Upland cotton (Gossypium hirsutum L.)
- (2014) Shiyi Tang et al. EUPHYTICA
- Genetic map and QTL controlling fiber quality traits in upland cotton (Gossypium hirsutum L.)
- (2014) Zhaoyun Tan et al. EUPHYTICA
- The calcium sensor GhCaM7 promotes cotton fiber elongation by modulating reactive oxygen species (ROS) production
- (2014) Wenxin Tang et al. NEW PHYTOLOGIST
- Phenylcoumaran Benzylic Ether Reductase Prevents Accumulation of Compounds Formed under Oxidative Conditions in Poplar Xylem
- (2014) C. Niculaes et al. PLANT CELL
- The Arabidopsis thaliana hypocotyl, a model to identify and study control mechanisms of cellular expansion
- (2014) Agnieszka Karolina Boron et al. PLANT CELL REPORTS
- Molecular basis of a shattering resistance boosting global dissemination of soybean
- (2014) Hideyuki Funatsuki et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- miR828 and miR858 regulate homoeologous MYB2 gene functions in Arabidopsis trichome and cotton fibre development
- (2014) Xueying Guan et al. Nature Communications
- Pfam: the protein families database
- (2013) Robert D. Finn et al. NUCLEIC ACIDS RESEARCH
- The Dual Functions of WLIM1a in Cell Elongation and Secondary Wall Formation in Developing Cotton Fibers
- (2013) L.-B. Han et al. PLANT CELL
- A Genetic and Metabolic Analysis Revealed that Cotton Fiber Cell Development Was Retarded by Flavonoid Naringenin
- (2013) J. Tan et al. PLANT PHYSIOLOGY
- Characterization and expression analysis of dirigent family genes related to stresses in Brassica
- (2013) Senthil Kumar Thamil Arasan et al. PLANT PHYSIOLOGY AND BIOCHEMISTRY
- Dirigent domain-containing protein is part of the machinery required for formation of the lignin-based Casparian strip in the root
- (2013) P. S. Hosmani et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Overexpression of cotton (Gossypium hirsutum) dirigent1 gene enhances lignification that blocks the spread of Verticillium dahliae
- (2012) Haiyan Shi et al. ACTA BIOCHIMICA ET BIOPHYSICA SINICA
- ParaAT: A parallel tool for constructing multiple protein-coding DNA alignments
- (2012) Zhang Zhang et al. BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
- Opposite Stereoselectivities of Dirigent Proteins inArabidopsisandSchizandraSpecies
- (2012) Kye-Won Kim et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres
- (2012) Andrew H. Paterson et al. NATURE
- The draft genome of a diploid cotton Gossypium raimondii
- (2012) Kunbo Wang et al. NATURE GENETICS
- MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity
- (2012) Y. Wang et al. NUCLEIC ACIDS RESEARCH
- FIMO: scanning for occurrences of a given motif
- (2011) Charles E. Grant et al. BIOINFORMATICS
- Phytozome: a comparative platform for green plant genomics
- (2011) David M. Goodstein et al. NUCLEIC ACIDS RESEARCH
- HMMER web server: interactive sequence similarity searching
- (2011) R. D. Finn et al. NUCLEIC ACIDS RESEARCH
- Proteomic analysis of the sea-island cotton roots infected by wilt pathogen Verticillium dahliae
- (2011) Fu-Xin Wang et al. PROTEOMICS
- Genome sequence of the palaeopolyploid soybean
- (2010) Jeremy Schmutz et al. NATURE
- The genome of Theobroma cacao
- (2010) Xavier Argout et al. NATURE GENETICS
- YLoc—an interpretable web server for predicting subcellular localization
- (2010) Sebastian Briesemeister et al. NUCLEIC ACIDS RESEARCH
- Molecular and Biochemical Evidence for Phenylpropanoid Synthesis and Presence of Wall-linked Phenolics in Cotton Fibers
- (2009) Ling Fan et al. Journal of Integrative Plant Biology
- MEME SUITE: tools for motif discovery and searching
- (2009) T. L. Bailey et al. NUCLEIC ACIDS RESEARCH
- Importance of Lineage-Specific Expansion of Plant Tandem Duplicates in the Adaptive Response to Environmental Stimuli
- (2008) K. Hanada et al. PLANT PHYSIOLOGY
- The Evolution of Spinnable Cotton Fiber Entailed Prolonged Development and a Novel Metabolism
- (2008) Ran Hovav et al. PLoS Genetics
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationPublish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn More