Article
Neurosciences
Shi-Da Wang, Xue Wang, Yun Zhao, Bing-Hua Xue, Xiao-Tian Wang, Yu-Xin Chen, Zi-Qian Zhang, Ying-Rui Tian, Fang Xie, Ling-Jia Qian
Summary: This study found that chronic stress can lead to cognitive decline, but the specific mechanisms are unclear. Experimental evidence has shown that homocysteine (Hcy) is associated with stress and cognitive decline. Additionally, increased Hcy levels can cause cognitive decline and downregulation of brain-derived neurotrophic factor (BDNF), while reducing Hcy can alleviate these deficits. Furthermore, both stress and Hcy can disrupt DNA methylation in the brain and induce hypermethylation in the BDNF promoter. Interventions with the enzyme ten-eleven translocation (TET1) can alleviate cognitive decline caused by Hcy. These results suggest that Hcy is likely involved in chronic stress-induced BDNF reduction and related cognitive deficits, and that Hcy-induced DNA hypermethylation in the BDNF promoter may have negative side effects. Additionally, the results suggest the possibility of Hcy as a target for therapy and the potential value of vitamin B intake in preventing stress-induced cognitive decline.
NEUROSCIENCE BULLETIN
(2022)
Article
Geriatrics & Gerontology
Raul Fernandez Perez, Juan Jose Alba-Linares, Juan Ramon Tejedor, Agustin Fernandez Fernandez, Miguel Calero, Aurora Roman-Dominguez, Consuelo Borras, Jose Vina, Jesus Avila, Miguel Medina, Mario Fernandez Fraga
Summary: The study reveals the presence of dementia-associated epigenetic patterns before diagnosis, highlighting the potential importance of these epigenetic alterations in the development of dementia. The findings suggest that epigenetic biomarkers based on peripheral tissues may be useful for disease detection.
JOURNALS OF GERONTOLOGY SERIES A-BIOLOGICAL SCIENCES AND MEDICAL SCIENCES
(2022)
Article
Medicine, General & Internal
Hui-Fu Wang, Wei Zhang, Edmund T. Rolls, Yuzhu Li, Linbo Wang, Ya-Hui Ma, Jujiao Kang, Jianfeng Feng, Jin-Tai Yu, Wei Cheng
Summary: This study investigated the association of hearing performance with cognitive function, brain structure, and cerebrospinal fluid (CSF) proteins. The findings revealed that poor hearing performance was related to worse cognitive function, brain atrophy, and tau pathology.
Article
Immunology
Stephanie Shiau, Stephen M. Arpadi, Yanhan Shen, Anyelina Cantos, Christian Vivar Ramon, Jayesh Shah, Grace Jang, Jennifer J. Manly, Adam M. Brickman, Andrea A. Baccarelli, Michael T. Yin
Summary: The study observed accelerated aging using DNA methylation biomarkers in African American older individuals with HIV, revealing significant differences in biomarker measurements compared to the control group and associations between aging biomarkers and cognitive function.
CLINICAL INFECTIOUS DISEASES
(2021)
Article
Pediatrics
Lauren A. Eaves, Adam E. Enggasser, Marie Camerota, Semsa Gogcu, William A. Gower, Hadley Hartwell, Wesley M. Jackson, Elizabeth Jensen, Robert M. Joseph, Carmen J. Marsit, Kyle Roell, Hudson P. Santos, Jeffrey S. Shenberger, Lisa Smeester, Diana Yanni, Karl C. K. Kuban, T. Michael O'Shea, Rebecca C. Fry
Summary: This study investigated the relationship between CpG methylation in the placenta and neonatal blood and neonatal inflammation in extremely preterm infants. The study found that placental CpG methylation was strongly associated with sustained systemic inflammation (ISSI), while neonatal blood CpG methylation was associated with day-one inflammation (DOI).
PEDIATRIC RESEARCH
(2023)
Article
Biochemistry & Molecular Biology
Yan Xia, Rujia Dai, Kangli Wang, Chuan Jiao, Chunling Zhang, Yuchen Xu, Honglei Li, Xi Jing, Yu Chen, Yi Jiang, Richard F. Kopp, Gina Giase, Chao Chen, Chunyu Liu
Summary: The study expanded the regulatory networks related to sex-differential methylation and psychiatric disorders by integrating methylation quantitative trait loci, gene expression, and protein-protein interaction data. It found significant enrichment of sex-associated genes in psychiatric disorder-associated gene sets, suggesting that sex-differential genes in neuronal pathways may contribute to the sex-bias of psychiatric disorders.
MOLECULAR PSYCHIATRY
(2021)
Article
Oncology
Kristen Kocher, Surajit Bhattacharya, Matthew S. Bramble, Daniel Okitundu-Luwa, Dieudonne Mumba Ngoyi, Desire Tshala-Katumbay, Eric Vilain
Summary: Through analysis of konzo patients and healthy controls, we identified 117 differentially methylated loci associated with the clinical phenotype of konzo, providing insights into the molecular mechanisms underlying the disease.
CLINICAL EPIGENETICS
(2022)
Article
Clinical Neurology
Gemma Camara, Majed Alotaibi, Melissa Lessard-Beaudoin, Kate Busch, Louis Gendron, Rona K. Graham
Summary: This study found that elderly individuals exhibit specific olfactory loss, particularly in identifying lemon, pizza, fruit punch, cheddar cheese, and lime. There was also a significant difference in the ability to detect certain odours between the sexes. Results showed that misidentification of certain scents was associated with cognitive scores, suggesting that olfactory dysfunction may serve as an early predictor of impending cognitive decline. This study supports the importance of testing olfactory function in the elderly and suggests the potential use of loss of smell for particular scents as a diagnostic tool.
PROGRESS IN NEURO-PSYCHOPHARMACOLOGY & BIOLOGICAL PSYCHIATRY
(2023)
Article
Cell Biology
Tingting Bi, Ruiqi Feng, Libin Zhan, Weiming Ren, Xiaoguang Lu
Summary: This study shows that the prevention and treatment of DACD by ZiBuPiYin recipe partly depends on the gut microbiota, and the regulatory effects of bacteria-derived metabolites and microbiota-gut-brain axis are important protective mechanisms of ZiBuPiYin recipe.
FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY
(2021)
Article
Medicine, General & Internal
Miguel Angel Rivas-Fernandez, Monica Lindin, Montserrat Zurron, Fernando Diaz, Cristina Lojo-Seoane, Arturo X. Pereiro, Santiago Galdo-Alvarez
Summary: Subjective Cognitive Decline (SCD) may represent a preclinical stage of Alzheimer's disease (AD) and is associated with structural changes in the brain. However, the evidence regarding these changes remains inconsistent.
FRONTIERS IN MEDICINE
(2023)
Article
Geriatrics & Gerontology
Timothy P. Siejka, Velandai K. Srikanth, Ruth E. Hubbard, Chris Moran, Richard Beare, Amanda G. Wood, Taya A. Collyer, Siddhanth Gujjari, Thanh G. Phan, Michele L. Callisaya
Summary: This study examined the effect of frailty on cognitive decline and found that frailty is associated with early cognitive dysfunction. Measuring frailty may help identify the risk of cognitive decline.
JOURNALS OF GERONTOLOGY SERIES A-BIOLOGICAL SCIENCES AND MEDICAL SCIENCES
(2022)
Article
Microbiology
Hoon Je Seong, Simon Roux, Chung Yeon Hwang, Woo Jun Sul
Summary: The distribution patterns of microbial epigenetic marks in the ocean microbiome were analyzed through genome-centric metagenomics, revealing that DNA methylation patterns are associated with ecological changes and virus-host dynamics in the ocean microbiome.
Article
Clinical Neurology
Shahram Oveisgharan, Jingyun Yang, Lei Yu, Dominika Burba, Woojeong Bang, Shinya Tasaki, Fran Grodstein, Yanling Wang, Jinying Zhao, Philip Lawrence De Jager, Julie A. Schneider, David A. Bennett
Summary: This study aimed to test the association between estrogen and Alzheimer's disease (AD) in women using ER (GPER1, ER2, and ER1) variants as an indirect method. The results showed consistent associations between GPER1 molecular variants and AD traits in women, while the associations between ER molecular genomic variants and AD traits were less robust in men.
Article
Neurosciences
Zhengshi Yang, Jeffrey L. Cummings, Jefferson W. Kinney, Dietmar Cordes
Summary: This study evaluated the progression of brain glucose metabolism among individuals with a biological signature of Alzheimer's disease (AD) and its relevance to cognitive decline. The results showed significant glucose metabolism deficit in the AD group, which accelerated with disease progression. Longitudinal FDG-PET scans could potentially help predict the rate of cognitive decline and assess the impact of treatment in interventional trials.
FRONTIERS IN NEUROSCIENCE
(2023)
Article
Multidisciplinary Sciences
Harry MacKay, Chathura J. Gunasekara, Kit-Yi Yam, Dollada Srisai, Hari Krishna Yalamanchili, Yumei Li, Rui Chen, Cristian Coarfa, Robert A. Waterland
Summary: Recent studies have confirmed that obesity is primarily a neurodevelopmental disease influenced by nutrition during critical ontogenic windows. This study examines the role of epigenetic mechanisms in establishing and maintaining the brain's energy balance circuitry, specifically in the hypothalamic arcuate nucleus. The results indicate that postnatal epigenetic maturation is cell type and sex specific, occurring in genomic regions associated with body mass index heritability. These findings provide valuable insights into the limited ontogenic windows for developmental programming of obesity and the sex differences in sensitivity, and offer a resource for epigenetic analysis of energy balance programming.
Article
Geriatrics & Gerontology
Zhen Mei, Adriana Lori, Selina M. Vattathil, Patricia A. Boyle, Bekh Bradley, Peng Li, David A. Bennett, Thomas S. Wingo, Aliza P. Wingo
Summary: This study utilized a machine learning approach to identify important correlates of purpose in life, finding that factors such as loneliness, harm avoidance, older age, and depressive symptoms were associated with lower purpose in life, while perceived social support, more social activities, more years of education, and higher income were associated with greater purpose in life.
AMERICAN JOURNAL OF GERIATRIC PSYCHIATRY
(2021)
Article
Genetics & Heredity
Chloe Robins, Yue Liu, Wen Fan, Duc M. Duong, Jacob Meigs, Nadia Harerimana, Ekaterina S. Gerasimov, Eric B. Dammer, David J. Cutler, Thomas G. Beach, Eric M. Reiman, Philip L. De Jager, David A. Bennett, James J. Lah, Aliza P. Wingo, Allan Levey, Nicholas T. Seyfried, Thomas S. Wingo
Summary: The study generated an online brain pQTL resource for 7,376 proteins by analyzing genetic and proteomic data from the dorsolateral prefrontal cortex of 330 older adults. The identified pQTLs tend to be non-synonymous variations, over-represented among brain disease-associated variants, and show good replication in an independent brain dataset. Comparison with brain eQTLs revealed that most pQTLs are also eQTLs, suggesting lower pQTL mapping power and greater evolutionary constraint on protein abundance.
AMERICAN JOURNAL OF HUMAN GENETICS
(2021)
Article
Genetics & Heredity
Aliza P. Wingo, Yue Liu, Ekaterina S. Gerasimov, Jake Gockley, Benjamin A. Logsdon, Duc M. Duong, Eric B. Dammer, Chloe Robins, Thomas G. Beach, Eric M. Reiman, Michael P. Epstein, Philip L. De Jager, James J. Lah, David A. Bennett, Nicholas T. Seyfried, Allan I. Levey, Thomas S. Wingo
Summary: This study identified 11 genes that may play a role in Alzheimer's disease (AD) by affecting brain protein abundance, through a proteome-wide association study. Eight of these genes are new AD risk genes not identified before by AD GWAS, providing new insights into AD pathogenesis. This research offers promising targets for further mechanistic and therapeutic studies on AD.
Article
Neurosciences
Thomas S. Wingo, Yue Liu, Ekaterina S. Gerasimov, Jake Gockley, Benjamin A. Logsdon, Duc M. Duong, Eric B. Dammer, Adriana Lori, Paul J. Kim, Kerry J. Ressler, Thomas G. Beach, Eric M. Reiman, Michael P. Epstein, Philip L. De Jager, James J. Lah, David A. Bennett, Nicholas T. Seyfried, Allan Levey, Aliza P. Wingo
Summary: Wingo et al. integrated depression GWAS results with human brain proteomes to perform proteome-wide association studies followed by Mendelian randomization. They identified 25 proteins as potential causal mediators of depression, of which 20 are new.
NATURE NEUROSCIENCE
(2021)
Article
Genetics & Heredity
Jake Gockley, Kelsey S. Montgomery, William L. Poehlman, Jesse C. Wiley, Yue Liu, Ekaterina Gerasimov, Anna K. Greenwood, Solveig K. Sieberts, Aliza P. Wingo, Thomas S. Wingo, Lara M. Mangravite, Benjamin A. Logsdon
Summary: This study used the FUSION transcriptome-wide association study method to identify genetic variants driving Alzheimer's disease risk in multiple neocortical regions, revealing 8 genes significantly associated with AD. The results provide evidence of cis-genetic variation increasing AD risk through these 8 genes across six distinct genomic loci.
Article
Clinical Neurology
Liana G. Apostolova, Paul Aisen, Ani Eloyan, Anne Fagan, Keith N. Fargo, Tatiana Foroud, Constantine Gatsonis, Lea T. Grinberg, Clifford R. Jack, Joel Kramer, Robert Koeppe, Walter A. Kukull, Melissa E. Murray, Kelly Nudelman, Malia Rumbaugh, Arthur Toga, Prashanthi Vemuri, Amy Trullinger, Leonardo Iaccarino, Gregory S. Day, Neill R. Graff-Radford, Lawrence S. Honig, David T. Jones, Joseph Masdeu, Mario Mendez, Erik Musiek, Chiadi U. Onyike, Emily Rogalski, Steve Salloway, David A. Wolk, Thomas S. Wingo, Maria C. Carrillo, Bradford C. Dickerson, Gil D. Rabinovici
Summary: The Longitudinal EOAD Study (LEADS) aims to track EOAD patients, define their clinical, imaging, and fluid biomarker characteristics, develop sensitive cognitive and biomarker measures for future use, and establish a trial-ready network to advance Alzheimer's disease research.
ALZHEIMERS & DEMENTIA
(2021)
Article
Multidisciplinary Sciences
Yanting Huang, Xiaobo Sun, Huige Jiang, Shaojun Yu, Chloe Robins, Matthew J. Armstrong, Ronghua Li, Zhen Mei, Xiaochuan Shi, Ekaterina Sergeevna Gerasimov, Philip L. De Jager, David A. Bennett, Aliza P. Wingo, Peng Jin, Thomas S. Wingo, Zhaohui S. Qin
Summary: The study introduces a method called EWASplus that extends the coverage of epigenome-wide association studies (EWAS) to the entire genome using supervised machine learning, and identifies novel brain CpG sites associated with Alzheimer's disease.
NATURE COMMUNICATIONS
(2021)
Article
Neurosciences
Nadia Harerimana, Yue Liu, Ekaterina S. Gerasimov, Duc Duong, Thomas G. Beach, Eric M. Reiman, Julie A. Schneider, Patricia Boyle, Adriana Lori, David A. Bennett, James J. Lah, Allan Levey, Nicholas T. Seyfried, Thomas S. Wingo, Aliza P. Wingo
Summary: This study found a genetic correlation between depression and Alzheimer's disease (AD), suggesting a shared genetic basis. Depression was found to have a causal role in AD, potentially driven by specific brain transcripts and proteins. The findings highlight the importance of understanding the relationship between depression and AD.
BIOLOGICAL PSYCHIATRY
(2022)
Article
Clinical Neurology
Allan I. Levey, Deqiang Qiu, Liping Zhao, William T. Hu, Duc M. Duong, Lenora Higginbotham, Eric B. Dammer, Nicholas T. Seyfried, Thomas S. Wingo, Chadwick M. Hales, Malu Gamez Tansey, David S. Goldstein, Anees Abrol, Vince D. Calhoun, Felicia C. Goldstein, Ihab Hajjar, Anne M. Fagan, Doug Galasko, Steven D. Edland, John Hanfelt, James J. Lah, David Weinshenker
Summary: The study demonstrated that atomoxetine, a clinically approved noradrenaline reuptake inhibitor, improved multiple Alzheimer's disease biomarkers in individuals with mild cognitive impairment. Treatment with atomoxetine significantly reduced CSF levels of Tau and pTau, normalized CSF protein biomarker panels linked to synaptic function, brain metabolism, and glial immunity, and increased brain activity and metabolism in key temporal lobe circuits.
Article
Neurosciences
Erik C. B. Johnson, E. Kathleen Carter, Eric B. Dammer, Duc M. Duong, Ekaterina S. Gerasimov, Yue Liu, Jiaqi Liu, Ranjita Betarbet, Lingyan Ping, Luming Yin, Geidy E. Serrano, Thomas G. Beach, Junmin Peng, Philip L. De Jager, Vahram Haroutunian, Bin Zhang, Chris Gaiteri, David A. Bennett, Marla Gearing, Thomas S. Wingo, Aliza P. Wingo, James J. Lah, Allan I. Levey, Nicholas T. Seyfried
Summary: This study analyzed the proteomes of over 1,000 brain tissues and identified new protein co-expression modules associated with Alzheimer's disease. These modules were highly conserved across cohorts and brain regions and revealed a proteopathic nature of the disease. The study also found disease-associated modules unique to the proteome, which could serve as potential therapeutic targets and biomarkers for Alzheimer's disease.
NATURE NEUROSCIENCE
(2022)
Article
Clinical Neurology
Lei Yu, Patricia A. Boyle, Aliza P. Wingo, Jingyun Yang, Tianhao Wang, Aron S. Buchman, Thomas S. Wingo, Nicholas T. Seyfried, Allan Levey, Philip L. De Jager, Julie A. Schneider, David A. Bennett
Summary: The cortical proteins implicated in Alzheimer's dementia were found to be more associated with non-AD neurodegenerative and cerebrovascular conditions rather than AD pathology. Some proteins were found to be pleiotropic and associated with both neurodegenerative and cerebrovascular pathologies.
Article
Psychiatry
Aliza P. Wingo, Mengli Wang, Jiaqi Liu, Michael S. Breen, Hyun-Sik Yang, Beisha Tang, Julie A. Schneider, Nicholas T. Seyfried, James J. Lah, Allan Levey, David A. Bennett, Peng Jin, Philip L. De Jager, Thomas S. Wingo
Summary: This study identified miR-29a-3p and miR-132-3p as novel and independent contributors to cognitive trajectory in older adults. These microRNAs have a significant impact on cognitive performance and are not influenced by common neurodegenerative pathologies. Additionally, the findings provide a foundation for future studies to explore the mechanisms and interventions to enhance cognitive stability in advanced age.
TRANSLATIONAL PSYCHIATRY
(2022)
Meeting Abstract
Neurosciences
Nikolaos Daskalakis, Christos Chatzinakos, Aliza Wingo, Clara Snijders, Rahul Bharadwaj, Thomas Wingo, Nick Seyfried, Duc Duong, Sabina Berretta, Joel Kleinman, Kerry Ressler
NEUROPSYCHOPHARMACOLOGY
(2021)
Meeting Abstract
Neurosciences
Thomas S. Wingo, Ekaterina S. Gerasimov, Yue Liu, Duc M. Duong, Adriana Lori, Jake Gockley, Sylvanus Toikumo, Michael Breen, Adam Maihofer, Caroline Nievergelt, Karestan Koenen, Kerry Ressler, Daniel Levey, Joel Gelernter, Murray Stein, David Bennett, Allan Levey, Nicholas Seyfried, Aliza Wingo
BIOLOGICAL PSYCHIATRY
(2021)
Review
Neurosciences
Maya Jammoul, Dareen Jammoul, Kevin K. Wang, Firas Kobeissy, Ralph G. Depalma
Summary: This article reviews the possible mechanisms by which traumatic brain injury (TBI) may stimulate the development of opioid use disorder (OUD) and discusses the interaction between these two processes. CNS damage due to TBI appears to drive adverse effects of subsequent OUD, with pain being a risk factor for opioid use after TBI.
BIOLOGICAL PSYCHIATRY
(2024)
Article
Neurosciences
Danusa Mar Arcego, Jan-Paul Buschdorf, Nicholas O'Toole, Zihan Wang, Barbara Barth, Irina Pokhvisneva, Nirmala Arul Rayan, Sachin Patel, Euclides Jose de Mendonca Filho, Patrick Lee, Jennifer Tan, Ming Xuan Koh, Chu Ming Sim, Carine Parent, Randriely Merscher Sobreira de Lima, Andrew Clappison, Kieran J. O'Donnell, Carla Dalmaz, Janine Arloth, Nadine Provencal, Elisabeth B. Binder, Josie Diorio, Patricia Pelufo Silveira, Michael J. Meaney
Summary: This study investigates the impact of environmental influences on mental health by integrating transcriptomic data from animal models with human data. The results suggest that hippocampal glucocorticoid-related transcriptional activity mediates the effects of early adversity on neural mechanisms implicated in psychiatric disorders.
BIOLOGICAL PSYCHIATRY
(2024)
Article
Neurosciences
Milenna T. van Dijk, Ardesheer Talati, Pratik Kashyap, Karan Desai, Nora C. Kelsall, Marc J. Gameroff, Natalie Aw, Eyal Abraham, Breda Cullen, Jiook Cha, Christoph Anacker, Myrna M. Weissman, Jonathan Posner
Summary: This study found that maternal stress is associated with future depressive symptoms and alterations in microstructure of the dentate gyrus (DG) in offspring. These results were consistent across two independent cohorts.
BIOLOGICAL PSYCHIATRY
(2024)
Article
Neurosciences
Josephine C. McGowan, Liliana R. Ladner, Claire X. Shubeck, Juliana Tapia, Christina T. LaGamma, Amanda Anqueira-Gonzalez, Ariana DeFrancesco, Briana K. Chen, Holly C. Hunsberger, Ezra J. Sydnor, Ryan W. Logan, Tzong-Shiue Yu, Steven G. Kernie, Christine A. Denny
Summary: Traumatic brain injury (TBI) leads to fear generalization by altering fear memory traces, and this symptom can be improved with (R,S)-ketamine.
BIOLOGICAL PSYCHIATRY
(2024)