Genomic data inform conservation of rare tree species: clonality, diversity and hybridity in Eucalyptus series in a global biodiversity hotspot

Landscape and taxon age are associated with differing patterns of hybridization in two Eucalyptus (Myrtaceae) subgenera

(2020) T P Robins et al.   ANNALS OF BOTANY

Pervasive admixture between eucalypt species has consequences for conservation and assisted migration

(2019) Brenton von Takach Dukai et al.   Evolutionary Applications

The future is now: amplicon sequencing and sequence capture usher in the conservation genomics era

(2019) Mariah H. Meek et al.   Molecular Ecology Resources

Inbreeding depression and differential maladaptation shape the fitness trajectory of two co-occurring Eucalyptus species

(2019) Henry Nickolas et al.   ANNALS OF FOREST SCIENCE

Conservation genomics of range disjunction in a global biodiversity hotspot: a case study of Banksia biterax (Proteaceae) in southwestern Australia

(2019) Donna Bradbury et al.   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Adaptive variation for growth and resistance to a novel pathogen along climatic gradients in a foundation tree

(2019) Collin W. Ahrens et al.   Evolutionary Applications

Standing genomic variation within coding and regulatory regions contributes to the adaptive capacity to climate in a foundation tree species

(2019) Collin W. Ahrens et al.   MOLECULAR ECOLOGY

Conservation of old individual trees and small populations is integral to maintain species' genetic diversity of a historically fragmented woody perennial

(2019) Nicole Bezemer et al.   MOLECULAR ECOLOGY

Phylogenomics shows lignotuber state is taxonomically informative in closely related eucalypts

(2019) Carl R. Gosper et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Conservation genetics: Linking science with practice

(2019) Rolf Holderegger et al.   MOLECULAR ECOLOGY

Landscape drivers of genomic diversity and divergence in woodland Eucalyptus

(2019) Kevin D Murray et al.   MOLECULAR ECOLOGY

Temperature and Rainfall Are Separate Agents of Selection Shaping Population Differentiation in a Forest Tree

(2019) João Costa e Silva et al.   Forests

Speciation in the presence of gene flow: population genomics of closely related and diverging Eucalyptus species

(2018) Susan Rutherford et al.   HEREDITY

dartr : An r package to facilitate analysis of SNP data generated from reduced representation genome sequencing

(2018) Bernd Gruber et al.   Molecular Ecology Resources

Minimum sample sizes for population genomics: an empirical study from an Amazonian plant species

(2017) Alison G. Nazareno et al.   Molecular Ecology Resources

Taxonomy anarchy hampers conservation

(2017) Stephen T. Garnett et al.   NATURE

Genetic and morphological analysis of multi-stemmed plants of tuart (Eucalyptus gomphocephala)

(2016) M. Byrne et al.   AUSTRALIAN JOURNAL OF BOTANY

Genetic diversity and structure of the Australian flora

(2016) Linda Broadhurst et al.   DIVERSITY AND DISTRIBUTIONS

High density, genome-wide markers and intra-specific replication yield an unprecedented phylogenetic reconstruction of a globally significant, speciose lineage of Eucalyptus

(2016) Rebecca C. Jones et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Harnessing the power of RADseq for ecological and evolutionary genomics

(2016) Kimberly R. Andrews et al.   NATURE REVIEWS GENETICS

Understanding Inbreeding Depression, Purging, and Genetic Rescue

(2016) Philip W. Hedrick et al.   TRENDS IN ECOLOGY & EVOLUTION

Not all rare species are the same: contrasting patterns of genetic diversity and population structure in two narrow-range endemic sedges

(2015) Rachel M. Binks et al.   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Assessing genetic structure in a rare clonal eucalypt as a basis for augmentation and introduction translocations

(2015) Jane F. Sampson et al.   CONSERVATION GENETICS

Clonality, interspecific hybridisation and inbreeding in a rare mallee eucalypt, Eucalyptus absita (Myrtaceae), and implications for conservation

(2015) Donna Bradbury et al.   CONSERVATION GENETICS

Bridging the gap: a genetic assessment framework for population-level threatened plant conservation prioritization and decision-making

(2015) Kym M. Ottewell et al.   DIVERSITY AND DISTRIBUTIONS

Genome-Wide Scan for Adaptive Divergence and Association with Population-Specific Covariates

(2015) M. Gautier   GENETICS

Patterns of Reproductive Isolation inEucalyptus—A Phylogenetic Perspective

(2015) Matthew J. Larcombe et al.   MOLECULAR BIOLOGY AND EVOLUTION

Evidence for local climate adaptation in early-life traits of Tasmanian populations of Eucalyptus pauciflora

(2015) Archana Gauli et al.   Tree Genetics & Genomes

Genomics and the challenging translation into conservation practice

(2015) Aaron B.A. Shafer et al.   TRENDS IN ECOLOGY & EVOLUTION

Genetics in conservation management: Revised recommendations for the 50/500 rules, Red List criteria and population viability analyses

(2014) Richard Frankham et al.   BIOLOGICAL CONSERVATION

Disjunct, highly divergent genetic lineages within two rareEremophila(Scrophulariaceae: Myoporeae) species in a biodiversity hotspot: implications for taxonomy and conservation

(2014) Tanya M. Llorens et al.   BOTANICAL JOURNAL OF THE LINNEAN SOCIETY

The genome of Eucalyptus grandis

(2014) Alexander A. Myburg et al.   NATURE

Biogeographical regions and phytogeography of the eucalypts

(2013) Carlos E. González-Orozco et al.   DIVERSITY AND DISTRIBUTIONS

Development of DArT Marker Platforms and Genetic Diversity Assessment of the U.S. Collection of the New Oilseed Crop Lesquerella and Related Species

(2013) Von Mark V. Cruz et al.   PLoS One

GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research--an update

(2012) R. Peakall et al.   BIOINFORMATICS

Implications of different species concepts for conserving biodiversity

(2012) Richard Frankham et al.   BIOLOGICAL CONSERVATION

Double Digest RADseq: An Inexpensive Method for De Novo SNP Discovery and Genotyping in Model and Non-Model Species

(2012) Brant K. Peterson et al.   PLoS One

Progress in Myrtaceae genetics and genomics: Eucalyptus as the pivotal genus

(2012) Dario Grattapaglia et al.   Tree Genetics & Genomes

Harnessing genomics for delineating conservation units

(2012) W. Chris Funk et al.   TRENDS IN ECOLOGY & EVOLUTION

PGDSpider: an automated data conversion tool for connecting population genetics and genomics programs

(2011) H. E. L. Lischer et al.   BIOINFORMATICS

The effects of age and environment on the expression of inbreeding depression in Eucalyptus globulus

(2011) J Costa e Silva et al.   HEREDITY

Biotechnology for saving rare and threatened flora in a biodiversity hotspot

(2011) Eric Bunn et al.   IN VITRO CELLULAR & DEVELOPMENTAL BIOLOGY-PLANT

Population genetic analysis and phylogeny reconstruction in Eucalyptus (Myrtaceae) using high-throughput, genome-wide genotyping

(2011) Dorothy A. Steane et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method

(2011) Dent A. Earl et al.   Conservation Genetics Resources

Orchid biogeography and factors associated with rarity in a biodiversity hotspot, the Southwest Australian Floristic Region

(2010) Ryan D. Phillips et al.   JOURNAL OF BIOGEOGRAPHY

Genomics and the future of conservation genetics

(2010) Fred W. Allendorf et al.   NATURE REVIEWS GENETICS

A high-density Diversity Arrays Technology (DArT) microarray for genome-wide genotyping in Eucalyptus

(2010) Carolina P Sansaloni et al.   Plant Methods

Conservation genetics in transition to conservation genomics

(2010) N. Joop Ouborg et al.   TRENDS IN GENETICS

Clonality and hybrid origin of the rareEucalyptus bennettiae(Myrtaceae) in Western Australia

(2009) E. Walker et al.   AUSTRALIAN JOURNAL OF BOTANY

Genetic markers in the playground of multivariate analysis

(2009) T Jombart et al.   HEREDITY

introgress: a software package for mapping components of isolation in hybrids

(2009) ZACHARIAH GOMPERT et al.   Molecular Ecology Resources

adegenet: a R package for the multivariate analysis of genetic markers

(2008) Thibaut Jombart   BIOINFORMATICS

Molecular and morphological evidence of natural interspecific hybridization between the uncommon Eucalyptus aggregata and the widespread E. rubida and E. viminalis

(2008) David L. Field et al.   CONSERVATION GENETICS

The Evolutionary Maintenance of Sexual Reproduction: Evidence from the Ecological Distribution of Asexual Reproduction in Clonal Plants

(2008) Jonathan Silvertown   INTERNATIONAL JOURNAL OF PLANT SCIENCES

Evidence for multiple refugia at different time scales during Pleistocene climatic oscillations in southern Australia inferred from phylogeography

(2008) M BYRNE   QUATERNARY SCIENCE REVIEWS

genepop’007: a complete re-implementation of the genepop software for Windows and Linux

(2007) FRANÇOIS ROUSSET   Molecular Ecology Resources