Genomic selection using a subset of SNPs identified by genome-wide association analysis for disease resistance traits in aquaculture species

Genomic selection for parasitic ciliate Cryptocaryon irritans resistance in large yellow croaker

(2020) Ji Zhao et al.   AQUACULTURE

Genome-wide association improves genomic selection for ammonia tolerance in the orange-spotted grouper (Epinephelus coioides)

(2020) Xinxin Shan et al.   AQUACULTURE

Penaeid shrimp genome provides insights into benthic adaptation and frequent molting

(2019) Xiaojun Zhang et al.   Nature Communications

Genomic Selection in Aquaculture: Application, Limitations and Opportunities With Special Reference to Marine Shrimp and Pearl Oysters

(2019) Kyall R. Zenger et al.   Frontiers in Genetics

Factors Affecting the Accuracy of Genomic Selection for Agricultural Economic Traits in Maize, Cattle, and Pig Populations

(2019) Haohao Zhang et al.   Frontiers in Genetics

Evaluation on the genomic selection in Litopenaeus vannamei for the resistance against Vibrio parahaemolyticus

(2019) Quanchao Wang et al.   AQUACULTURE

Potential of Genome Editing to Improve Aquaculture Breeding and Production

(2019) Remi L. Gratacap et al.   TRENDS IN GENETICS

Genome-wide association mapping and genomic prediction for CBSD resistance in Manihot esculenta

(2018) Siraj Ismail Kayondo et al.   Scientific Reports

Genomic Prediction of Breeding Values Using a Subset of SNPs Identified by Three Machine Learning Methods

(2018) Bo Li et al.   Frontiers in Genetics

Genomic Selection in Plant Breeding: Methods, Models, and Perspectives

(2017) José Crossa et al.   TRENDS IN PLANT SCIENCE

Applications of genotyping by sequencing in aquaculture breeding and genetics

(2017) Diego Robledo et al.   Reviews in Aquaculture

Diversity and linkage disequilibrium in farmed Tasmanian Atlantic salmon

(2016) J. Kijas et al.   ANIMAL GENETICS

GeneEvolve: a fast and memory efficient forward-time simulator of realistic whole-genome sequence and SNP data

(2016) Rasool Tahmasbi et al.   BIOINFORMATICS

Genomic selection in domestic animals: Principles, applications and perspectives

(2016) Didier Boichard et al.   COMPTES RENDUS BIOLOGIES

Genome-wide prediction models that incorporate de novo GWAS are a powerful new tool for tropical rice improvement

(2016) J E Spindel et al.   HEREDITY

Genomic Prediction in Pea: Effect of Marker Density and Training Population Size and Composition on Prediction Accuracy

(2015) Nadim Tayeh et al.   Frontiers in Plant Science

Genome-Wide Regression and Prediction with the BGLR Statistical Package

(2014) P. Perez et al.   GENETICS

Comparison of genomic predictions using genomic relationship matrices built with different weighting factors to account for locus-specific variances

(2014) G. Su et al.   JOURNAL OF DAIRY SCIENCE

Understanding genomic selection in poultry breeding

(2014) A. WOLC   WORLDS POULTRY SCIENCE JOURNAL

synbreed: a framework for the analysis of genomic prediction data using R

(2012) Valentin Wimmer et al.   BIOINFORMATICS

Extension of the bayesian alphabet for genomic selection

(2011) David Habier et al.   BMC BIOINFORMATICS

Genome-Wide Association Study Identifies Loci for Body Composition and Structural Soundness Traits in Pigs

(2011) Bin Fan et al.   PLoS One

A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species

(2011) Robert J. Elshire et al.   PLoS One

Genome Wide Association Studies for Milk Production Traits in Chinese Holstein Population

(2010) Li Jiang et al.   PLoS One

Computing procedures for genetic evaluation including phenotypic, full pedigree, and genomic information

(2009) I. Misztal et al.   JOURNAL OF DAIRY SCIENCE

Invited review: Genomic selection in dairy cattle: Progress and challenges

(2009) B.J. Hayes et al.   JOURNAL OF DAIRY SCIENCE

Potential etiologic and functional implications of genome-wide association loci for human diseases and traits

(2009) L. A. Hindorff et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Efficient Methods to Compute Genomic Predictions

(2008) P.M. VanRaden   JOURNAL OF DAIRY SCIENCE

The impact of genetic relationship information on genome-assisted breeding values

(2007) D. Habier et al.   GENETICS