Gastrointestinal microbiota imbalance is triggered by the enrichment of Vibrio in subadult Litopenaeus vannamei with acute hepatopancreatic necrosis disease

Acute hepatopancreatic necrosis disease in penaeid shrimp

(2020) Ramya Kumar et al.   Reviews in Aquaculture

Effects of Carbon/Nitrogen Ratio on Growth, Intestinal Microbiota and Metabolome of Shrimp (Litopenaeus vannamei)

(2020) Haipeng Guo et al.   Frontiers in Microbiology

Microecological Koch’s postulates reveal that intestinal microbiota dysbiosis contributes to shrimp white feces syndrome

(2020) Zhijian Huang et al.   Microbiome

Fine-scale succession patterns and assembly mechanisms of bacterial community of Litopenaeus vannamei larvae across the developmental cycle

(2020) Yanting Wang et al.   Microbiome

Strain-specific changes in the gut microbiota profiles of the white shrimp Litopenaeus vannamei in response to cold stress

(2019) Jiajia Liu et al.   AQUACULTURE

Gut eukaryotic disease-discriminatory taxa are indicative of Pacific white shrimp (Litopenaeus vannamei) white feces syndrome

(2019) Wenfang Dai et al.   AQUACULTURE

Bile acid and bile acid transporters are involved in the pathogenesis of acute hepatopancreatic necrosis disease in white shrimp Litopenaeus vannamei

(2019) Ramya Kumar et al.   CELLULAR MICROBIOLOGY

Shrimp disease progression increases the gut bacterial network complexity and abundances of keystone taxa

(2019) Wenfang Dai et al.   AQUACULTURE

Intestinal bacterial signatures of white feces syndrome in shrimp

(2018) Dongwei Hou et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Pathogen colonization of the gastrointestinal microbiome at intensive care unit admission and risk for subsequent death or infection

(2018) Daniel E. Freedberg et al.   INTENSIVE CARE MEDICINE

Activation of the NLRP3 Inflammasome Pathway by Uropathogenic Escherichia coli Is Virulence Factor-Dependent and Influences Colonization of Bladder Epithelial Cells

(2018) Isak Demirel et al.   Frontiers in Cellular and Infection Microbiology

Gut Microbiota and its Modulation for Healthy Farming of Pacific White Shrimp Litopenaeus vannamei

(2018) Erchao Li et al.   Reviews in Fisheries Science & Aquaculture

Disease outbreak accompanies the dispersive structure of shrimp gut bacterial community with a simple core microbiota

(2018) Zhiyuan Yao et al.   AMB Express

Vibrio Ecology in the Neuse River Estuary, North Carolina, Characterized by Next-Generation Amplicon Sequencing of the Gene Encoding Heat Shock Protein 60 (hsp60)

(2018) Kelsey J. Jesser et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

White spot syndrome virus (WSSV) infection impacts intestinal microbiota composition and function in Litopenaeus vannamei

(2018) Jun Wang et al.   FISH & SHELLFISH IMMUNOLOGY

Response of host-bacterial colonization in shrimp to developmental stage, environment and disease

(2018) Jinbo Xiong et al.   MOLECULAR ECOLOGY

Significance of Vibrio species in the marine organic carbon cycle—A review

(2018) Xiaohua Zhang et al.   Science China-Earth Sciences

Growth performance, non-specific immunity, intestinal histology and disease resistance of Litopenaeus vannamei fed on a diet supplemented with live cells of Clostridium butyricum

(2018) Hai-dong Li et al.   AQUACULTURE

Multiplex SYBR Green and duplex TaqMan real-time PCR assays for the detection of Photorhabdus Insect-Related (Pir) toxin genes pirA and pirB

(2018) Roberto Cruz-Flores et al.   MOLECULAR AND CELLULAR PROBES

Transcriptome analysis of the hepatopancreas in Exopalaemon carinicauda infected with an AHPND-causing strain of Vibrio parahaemolyticus

(2017) Qianqian Ge et al.   FISH & SHELLFISH IMMUNOLOGY

Chytrid fungus infection in zebrafish demonstrates that the pathogen can parasitize non-amphibian vertebrate hosts

(2017) Nicole Liew et al.   Nature Communications

Comparative Genomic Analysis of Two Vibrio toranzoniae Strains with Different Virulence Capacity Reveals Clues on Its Pathogenicity for Fish

(2017) Aide Lasa et al.   Frontiers in Microbiology

pirABvp-Bearing Vibrio parahaemolyticus and Vibrio campbellii Pathogens Isolated from the Same AHPND-Affected Pond Possess Highly Similar Pathogenic Plasmids

(2017) Xuan Dong et al.   Frontiers in Microbiology

Microbiome of Pacific Whiteleg shrimp reveals differential bacterial community composition between Wild, Aquacultured and AHPND/EMS outbreak conditions

(2017) Fernanda Cornejo-Granados et al.   Scientific Reports

Bacterial Stress Responses during Host Infection

(2016) Ferric C. Fang et al.   Cell Host & Microbe

Transcriptional and metabolic regulation of denitrification in P aracoccus denitrificans allows low but significant activity of nitrous oxide reductase under oxic conditions

(2016) Zhi Qu et al.   ENVIRONMENTAL MICROBIOLOGY

Bacterial dynamics in intestines of the black tiger shrimp and the Pacific white shrimp during Vibrio harveyi exposure

(2016) Wanilada Rungrassamee et al.   JOURNAL OF INVERTEBRATE PATHOLOGY

Contrasting Ecological Processes and Functional Compositions Between Intestinal Bacterial Community in Healthy and Diseased Shrimp

(2016) Jinyong Zhu et al.   MICROBIAL ECOLOGY

Changes in intestinal bacterial communities are closely associated with shrimp disease severity

(2015) Jinbo Xiong et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

qPCR assay for detecting and quantifying a virulence plasmid in acute hepatopancreatic necrosis disease (AHPND) due to pathogenic Vibrio parahaemolyticus

(2015) Jee Eun Han et al.   AQUACULTURE

Progress in research on acute hepatopancreatic necrosis disease (AHPND)

(2015) Xupeng Hong et al.   AQUACULTURE INTERNATIONAL

Minor revision to V4 region SSU rRNA 806R gene primer greatly increases detection of SAR11 bacterioplankton

(2015) A Apprill et al.   AQUATIC MICROBIAL ECOLOGY

Contribution of neutral processes to the assembly of gut microbial communities in the zebrafish over host development

(2015) Adam R Burns et al.   ISME Journal

The opportunistic marine pathogenVibrio parahaemolyticusbecomes virulent by acquiring a plasmid that expresses a deadly toxin

(2015) Chung-Te Lee et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Microbial Invasions: The Process, Patterns, and Mechanisms

(2015) Cyrus Alexander Mallon et al.   TRENDS IN MICROBIOLOGY

A critical role for hemolysin in Vibrio fluvialis-induced IL-1β secretion mediated by the NLRP3 inflammasome in macrophages

(2015) Liqiong Song et al.   Frontiers in Microbiology

Effects of the Diet on the Microbiota of the Red Palm Weevil (Coleoptera: Dryophthoridae)

(2015) Matteo Montagna et al.   PLoS One

Characterization and PCR Detection Of Binary, Pir-Like Toxins from Vibrio parahaemolyticus Isolates that Cause Acute Hepatopancreatic Necrosis Disease (AHPND) in Shrimp

(2015) Ratchanok Sirikharin et al.   PLoS One

STAMP: statistical analysis of taxonomic and functional profiles

(2014) Donovan H. Parks et al.   BIOINFORMATICS

The Treatment-Naive Microbiome in New-Onset Crohn’s Disease

(2014) Dirk Gevers et al.   Cell Host & Microbe

Ecological theory as a foundation to control pathogenic invasion in aquaculture

(2014) Peter De Schryver et al.   ISME Journal

Growth performance, immune response, and disease resistance against Vibrio splendidus infection in juvenile sea cucumber Apostichopus japonicus fed a supplementary diet of the potential probiotic Paracoccus marcusii DB11

(2013) Fa-jun Yan et al.   AQUACULTURE

Determination of the infectious nature of the agent of acute hepatopancreatic necrosis syndrome affecting penaeid shrimp

(2013) L Tran et al.   DISEASES OF AQUATIC ORGANISMS

Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

(2013) Morgan G I Langille et al.   NATURE BIOTECHNOLOGY

Anaerobic Biodegradation of Pyrene by Paracoccus denitrificans Under Various Nitrate/Nitrite-Reducing Conditions

(2013) Xunan Yang et al.   WATER AIR AND SOIL POLLUTION

Diversity and antibacterial activity of culturable actinobacteria isolated from five species of the South China Sea gorgonian corals

(2013) Xiao-Yong Zhang et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

Historic emergence, impact and current status of shrimp pathogens in Asia

(2012) Timothy W. Flegel   JOURNAL OF INVERTEBRATE PATHOLOGY

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS