Alternative Polyadenylation: a new frontier in post transcriptional regulation
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Title
Alternative Polyadenylation: a new frontier in post transcriptional regulation
Authors
Keywords
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Journal
Biomarker Research
Volume 8, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2020-11-25
DOI
10.1186/s40364-020-00249-6
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Note: Only part of the references are listed.- Role of alternative polyadenylation dynamics in acute myeloid leukaemia at single-cell resolution
- (2019) Congting Ye et al. RNA Biology
- Alternative polyadenylation dependent function of splicing factor SRSF3 contributes to cellular senescence
- (2019) Ting Shen et al. Aging-US
- Alternative cleavage and polyadenylation in health and disease
- (2019) Andreas J. Gruber et al. NATURE REVIEWS GENETICS
- Alternative polyadenylation of single cells delineates cell types and serves as a prognostic marker in early stage breast cancer
- (2019) Nayoung Kim et al. PLoS One
- CFIm25 and alternative polyadenylation: Conflicting roles in cancer
- (2019) Mohammad Hassan Jafari Najaf Abadi et al. CANCER LETTERS
- Suppression of cleavage factor Im 25 promotes the proliferation of lung cancer cells through alternative polyadenylation
- (2018) Jingjing Huang et al. BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
- Nudt21 Controls Cell Fate by Connecting Alternative Polyadenylation to Chromatin Signaling
- (2018) Justin Brumbaugh et al. CELL
- Cell Cycle Regulation by Alternative Polyadenylation of CCND1
- (2018) Qiong Wang et al. Scientific Reports
- A compendium of conserved cleavage and polyadenylation events in mammalian genes
- (2018) Ruijia Wang et al. GENOME RESEARCH
- Regulators of alternative polyadenylation operate at the transition from mitosis to meiosis
- (2017) Lingjuan Shan et al. Journal of Genetics and Genomics
- Comprehensive Characterization of Alternative Polyadenylation in Human Cancer
- (2017) Yu Xiang et al. JNCI-Journal of the National Cancer Institute
- PolyA_DB 3 catalogs cleavage and polyadenylation sites identified by deep sequencing in multiple genomes
- (2017) Ruijia Wang et al. NUCLEIC ACIDS RESEARCH
- Poly(A)-ClickSeq: click-chemistry for next-generation 3΄-end sequencing without RNA enrichment or fragmentation
- (2017) Andrew Routh et al. NUCLEIC ACIDS RESEARCH
- The role of alternative polyadenylation in the antiviral innate immune response
- (2017) Xin Jia et al. Nature Communications
- PIGN gene expression aberration is associated with genomic instability and leukemic progression in acute myeloid leukemia with myelodysplastic features
- (2017) Emmanuel K. Teye et al. Oncotarget
- Comprehensive Characterization of Alternative Polyadenylation in Human Cancer
- (2017) Yu Xiang et al. JNCI-Journal of the National Cancer Institute
- A comprehensive analysis of 3′ end sequencing data sets reveals novel polyadenylation signals and the repressive role of heterogeneous ribonucleoprotein C on cleavage and polyadenylation
- (2016) Andreas J. Gruber et al. GENOME RESEARCH
- Alternative Polyadenylation: Another Foe in Cancer
- (2016) A. E. Erson-Bensan et al. MOLECULAR CANCER RESEARCH
- Alternative Polyadenylation of mRNAs: 3′-Untranslated Region Matters in Gene Expression
- (2016) MOLECULES AND CELLS
- Coupling between alternative polyadenylation and alternative splicing is limited to terminal introns
- (2016) Maliheh Movassat et al. RNA Biology
- CFIm25 regulates glutaminase alternative terminal exon definition to modulate miR-23 function
- (2016) Chioniso P. Masamha et al. RNA
- Evolution and Biological Roles of Alternative 3′UTRs
- (2016) Christine Mayr TRENDS IN CELL BIOLOGY
- PAPERCLIP Identifies MicroRNA Targets and a Role of CstF64/64tau in Promoting Non-canonical poly(A) Site Usage
- (2016) Hun-Way Hwang et al. Cell Reports
- 3USS: a web server for detecting alternative 3′UTRs from RNA-seq experiments
- (2015) Loredana Le Pera et al. BIOINFORMATICS
- The end of the message: multiple protein–RNA interactions define the mRNA polyadenylation site
- (2015) Yongsheng Shi et al. GENES & DEVELOPMENT
- Single-cell polyadenylation site mapping reveals 3' isoform choice variability
- (2015) L. Velten et al. Molecular Systems Biology
- Alternative 3′ UTRs act as scaffolds to regulate membrane protein localization
- (2015) Binyamin D. Berkovits et al. NATURE
- mRNA 3′-UTR shortening is a molecular signature of mTORC1 activation
- (2015) Jae-Woong Chang et al. Nature Communications
- Systematic Profiling of Poly(A)+ Transcripts Modulated by Core 3’ End Processing and Splicing Factors Reveals Regulatory Rules of Alternative Cleavage and Polyadenylation
- (2015) Wencheng Li et al. PLoS Genetics
- Alternative Polyadenylation Allows Differential Negative Feedback of Human miRNA miR-579 on Its Host Gene ZFR
- (2015) Ludwig Christian Hinske et al. PLoS One
- Detection of PIWI and piRNAs in the mitochondria of mammalian cancer cells
- (2014) ChangHyuk Kwon et al. BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
- Fip1 regulates mRNA alternative polyadenylation to promote stem cell self-renewal
- (2014) B. Lackford et al. EMBO JOURNAL
- CFIm25 links alternative polyadenylation to glioblastoma tumour suppression
- (2014) Chioniso P. Masamha et al. NATURE
- APASdb: a database describing alternative poly(A) sites and selection of heterogeneous cleavage sites downstream of poly(A) signals
- (2014) Leiming You et al. NUCLEIC ACIDS RESEARCH
- Global 3′ UTR shortening has a limited effect on protein abundance in proliferating T cells
- (2014) Andreas R. Gruber et al. Nature Communications
- Dynamic analyses of alternative polyadenylation from RNA-seq reveal a 3′-UTR landscape across seven tumour types
- (2014) Zheng Xia et al. Nature Communications
- Nucleosome Distribution near the 3′ Ends of Genes in the Human Genome
- (2013) Huan HUANG et al. BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY
- 3' UTR-isoform choice has limited influence on the stability and translational efficiency of most mRNAs in mouse fibroblasts
- (2013) N. Spies et al. GENOME RESEARCH
- A Mammalian Pre-mRNA 5′ End Capping Quality Control Mechanism and an Unexpected Link of Capping to Pre-mRNA Processing
- (2013) Xinfu Jiao et al. MOLECULAR CELL
- Alternative cleavage and polyadenylation: extent, regulation and function
- (2013) Ran Elkon et al. NATURE REVIEWS GENETICS
- Genome-wide maps of polyadenylation reveal dynamic mRNA 3'-end formation in mammalian cell lineages
- (2013) L. Wang et al. RNA
- Alternative cleavage and polyadenylation: the long and short of it
- (2013) Bin Tian et al. TRENDS IN BIOCHEMICAL SCIENCES
- U1 snRNP Determines mRNA Length and Regulates Isoform Expression
- (2012) Michael G. Berg et al. CELL
- Alternative Polyadenylation Mediates MicroRNA Regulation of Muscle Stem Cell Function
- (2012) Stéphane C. Boutet et al. Cell Stem Cell
- Alternative Cleavage and Polyadenylation during Colorectal Cancer Development
- (2012) A. R. Morris et al. CLINICAL CANCER RESEARCH
- Extensive alternative polyadenylation during zebrafish development
- (2012) I. Ulitsky et al. GENOME RESEARCH
- A quantitative atlas of polyadenylation in five mammals
- (2012) Adnan Derti et al. GENOME RESEARCH
- Analysis of alternative cleavage and polyadenylation by 3′ region extraction and deep sequencing
- (2012) Mainul Hoque et al. NATURE METHODS
- Estrogen-induced upregulation and 3′-UTR shortening of CDC6
- (2012) Begum H. Akman et al. NUCLEIC ACIDS RESEARCH
- Poly(A) binding protein nuclear 1 levels affect alternative polyadenylation
- (2012) Eleonora de Klerk et al. NUCLEIC ACIDS RESEARCH
- An in-depth map of polyadenylation sites in cancer
- (2012) Yuefeng Lin et al. NUCLEIC ACIDS RESEARCH
- Cleavage factor Imis a key regulator of 3′ UTR length
- (2012) Andreas R. Gruber et al. RNA Biology
- Genome-wide Analysis of Pre-mRNA 3′ End Processing Reveals a Decisive Role of Human Cleavage Factor I in the Regulation of 3′ UTR Length
- (2012) Georges Martin et al. Cell Reports
- Genetics and Regulatory Impact of Alternative Polyadenylation in Human B-Lymphoblastoid Cells
- (2012) Oh Kyu Yoon et al. PLoS Genetics
- Ending the message: poly(A) signals then and now
- (2011) N. J. Proudfoot GENES & DEVELOPMENT
- Mechanisms and Consequences of Alternative Polyadenylation
- (2011) Dafne Campigli Di Giammartino et al. MOLECULAR CELL
- Transcriptional activity regulates alternative cleavage and polyadenylation
- (2011) Z. Ji et al. Molecular Systems Biology
- Neuron-specific ELAV/Hu proteins suppress HuR mRNA during neuronal differentiation by alternative polyadenylation
- (2011) Kyle D. Mansfield et al. NUCLEIC ACIDS RESEARCH
- Genome-wide landscape of polyadenylation in Arabidopsis provides evidence for extensive alternative polyadenylation
- (2011) X. Wu et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Complex and dynamic landscape of RNA polyadenylation revealed by PAS-Seq
- (2011) P. J. Shepard et al. RNA
- Structural biology of poly(A) site definition
- (2011) Qin Yang et al. Wiley Interdisciplinary Reviews-RNA
- A functional human Poly(A) site requires only a potent DSE and an A-rich upstream sequence
- (2010) Nuno Miguel Nunes et al. EMBO JOURNAL
- U1 snRNP protects pre-mRNAs from premature cleavage and polyadenylation
- (2010) Daisuke Kaida et al. NATURE
- Understanding mechanisms underlying human gene expression variation with RNA sequencing
- (2010) Joseph K. Pickrell et al. NATURE
- Formation, regulation and evolution of Caenorhabditis elegans 3′UTRs
- (2010) Calvin H. Jan et al. NATURE
- Analysis and design of RNA sequencing experiments for identifying isoform regulation
- (2010) Yarden Katz et al. NATURE METHODS
- Molecular mechanisms of eukaryotic pre-mRNA 3′ end processing regulation
- (2010) Stefania Millevoi et al. NUCLEIC ACIDS RESEARCH
- Structural basis of UGUA recognition by the Nudix protein CFIm25 and implications for a regulatory role in mRNA 3' processing
- (2010) Q. Yang et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Pre-mRNA 3′-end processing complex assembly and function
- (2010) Serena Chan et al. Wiley Interdisciplinary Reviews-RNA
- Next-generation DNA sequencing of paired-end tags (PET) for transcriptome and genome analyses
- (2009) M. J. Fullwood et al. GENOME RESEARCH
- Poly(A) Tail Length Is Controlled by the Nuclear Poly(A)-binding Protein Regulating the Interaction between Poly(A) Polymerase and the Cleavage and Polyadenylation Specificity Factor
- (2009) Uwe Kühn et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Molecular Architecture of the Human Pre-mRNA 3′ Processing Complex
- (2009) Yongsheng Shi et al. MOLECULAR CELL
- Reprogramming of 3′ Untranslated Regions of mRNAs by Alternative Polyadenylation in Generation of Pluripotent Stem Cells from Different Cell Types
- (2009) Zhe Ji et al. PLoS One
- Alternative isoform regulation in human tissue transcriptomes
- (2008) Eric T. Wang et al. NATURE
- Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing
- (2008) Qun Pan et al. NATURE GENETICS
- CSR1 induces cell death through inactivation of CPSF3
- (2008) Z-H Zhu et al. ONCOGENE
- Proliferating Cells Express mRNAs with Shortened 3' Untranslated Regions and Fewer MicroRNA Target Sites
- (2008) R. Sandberg et al. SCIENCE
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