Linking Gut Microbiome and Lipid Metabolism: Moving beyond Associations
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Title
Linking Gut Microbiome and Lipid Metabolism: Moving beyond Associations
Authors
Keywords
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Journal
Metabolites
Volume 11, Issue 1, Pages 55
Publisher
MDPI AG
Online
2021-01-16
DOI
10.3390/metabo11010055
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Note: Only part of the references are listed.- Obesity Affects the Microbiota–Gut–Brain Axis and the Regulation Thereof by Endocannabinoids and Related Mediators
- (2020) Nicola Forte et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Software tools, databases and resources in metabolomics: updates from 2018 to 2019
- (2020) Keiron O’Shea et al. Metabolomics
- Describing the fecal metabolome in cryogenically collected samples from healthy participants
- (2020) Kajetan Trošt et al. Scientific Reports
- Age-Related Changes in the Gut Microbiota Modify Brain Lipid Composition
- (2020) Mayssa Albouery et al. Frontiers in Cellular and Infection Microbiology
- Improving lipid mapping in Genome Scale Metabolic Networks using ontologies
- (2020) Nathalie Poupin et al. Metabolomics
- Microbial metabolites shape lipid metabolism
- (2020) Annalisa M. VanHook Science Signaling
- Sphingolipids produced by gut bacteria enter host metabolic pathways impacting ceramide levels
- (2020) Elizabeth L. Johnson et al. Nature Communications
- Microbiome-derived carnitine mimics as previously unknown mediators of gut-brain axis communication
- (2020) Heather Hulme et al. Science Advances
- Cholesterol Metabolism by Uncultured Human Gut Bacteria Influences Host Cholesterol Level
- (2020) Douglas J. Kenny et al. Cell Host & Microbe
- Dietary sphinganine is selectively assimilated by members of the mammalian gut microbiome
- (2020) Min-Ting Lee et al. JOURNAL OF LIPID RESEARCH
- Update on LIPID MAPS Classification, Nomenclature and Shorthand Notation for MS-derived Lipid Structures
- (2020) Gerhard Liebisch et al. JOURNAL OF LIPID RESEARCH
- The ModelSEED Biochemistry Database for the integration of metabolic annotations and the reconstruction, comparison and analysis of metabolic models for plants, fungi and microbes
- (2020) Samuel M D Seaver et al. NUCLEIC ACIDS RESEARCH
- RefMet: a reference nomenclature for metabolomics
- (2020) Eoin Fahy et al. NATURE METHODS
- Targeting the endocannabinoid system with microbial interventions to improve gut integrity
- (2020) Jack Jansma et al. PROGRESS IN NEURO-PSYCHOPHARMACOLOGY & BIOLOGICAL PSYCHIATRY
- SLIMEr: probing flexibility of lipid metabolism in yeast with an improved constraint-based modeling framework
- (2019) Benjamín J. Sánchez et al. BMC Systems Biology
- Creation and analysis of biochemical constraint-based models using the COBRA Toolbox v.3.0
- (2019) Laurent Heirendt et al. Nature Protocols
- Bacteroides-Derived Sphingolipids Are Critical for Maintaining Intestinal Homeostasis and Symbiosis
- (2019) Eric M. Brown et al. Cell Host & Microbe
- LION/web: a web-based ontology enrichment tool for lipidomic data analysis
- (2019) Martijn R Molenaar et al. GigaScience
- A Multi-omics Approach to Unraveling the Microbiome-Mediated Effects of Arabinoxylan Oligosaccharides in Overweight Humans
- (2019) Alfonso Benítez-Páez et al. mSystems
- Characterization of gut microbiota, bile acid metabolism, and cytokines in intrahepatic cholangiocarcinoma
- (2019) Xiaodong Jia et al. HEPATOLOGY
- Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
- (2019) Evan Bolyen et al. NATURE BIOTECHNOLOGY
- Macronutrient metabolism by the human gut microbiome: major fermentation by-products and their impact on host health
- (2019) Kaitlyn Oliphant et al. Microbiome
- Alterations of Gut Microbiota and Blood Lipidome in Gestational Diabetes Mellitus With Hyperlipidemia
- (2019) He Liu et al. Frontiers in Physiology
- The intestinal microbiota regulates host cholesterol homeostasis
- (2019) Tiphaine Le Roy et al. BMC BIOLOGY
- Lipidomes in health and disease: Analytical strategies and considerations
- (2019) Fang Wei et al. TRAC-TRENDS IN ANALYTICAL CHEMISTRY
- Interplay between the human gut microbiome and host metabolism
- (2019) Alessia Visconti et al. Nature Communications
- Gut microbiota confers host resistance to obesity by metabolizing dietary polyunsaturated fatty acids
- (2019) Junki Miyamoto et al. Nature Communications
- Diversification of host bile acids by members of the gut microbiota
- (2019) Jenessa A. Winston et al. Gut Microbes
- Lipidomics from sample preparation to data analysis: a primer
- (2019) Thomas Züllig et al. ANALYTICAL AND BIOANALYTICAL CHEMISTRY
- Rapid and Concomitant Gut Microbiota and Endocannabinoidome Response to Diet-Induced Obesity in Mice
- (2019) Sébastien Lacroix et al. mSystems
- A review on human fecal metabolomics: Methods, applications and the human fecal metabolome database
- (2018) Naama Karu et al. ANALYTICA CHIMICA ACTA
- METLIN: A Technology Platform for Identifying Knowns and Unknowns
- (2018) Carlos Guijas et al. ANALYTICAL CHEMISTRY
- Sphingolipids in host–microbial interactions
- (2018) Stacey L Heaver et al. CURRENT OPINION IN MICROBIOLOGY
- The Impact of Carnitine on Dietary Fiber and Gut Bacteria Metabolism and Their Mutual Interaction in Monogastrics
- (2018) Abdallah Ghonimy et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Gut metabolome meets microbiome: A methodological perspective to understand the relationship between host and microbe
- (2018) Santosh Lamichhane et al. METHODS
- KBase: The United States Department of Energy Systems Biology Knowledgebase
- (2018) Adam P Arkin et al. NATURE BIOTECHNOLOGY
- The fecal metabolome as a functional readout of the gut microbiome
- (2018) Jonas Zierer et al. NATURE GENETICS
- From Network Analysis to Functional Metabolic Modeling of the Human Gut Microbiota
- (2018) Eugen Bauer et al. mSystems
- Gut microbiota dysbiosis is associated with malnutrition and reduced plasma amino acid levels: Lessons from genome-scale metabolic modeling
- (2018) Manish Kumar et al. METABOLIC ENGINEERING
- Author Correction: Sphingolipids and their metabolism in physiology and disease
- (2018) Yusuf A. Hannun et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- The gut microbiota promotes hepatic fatty acid desaturation and elongation in mice
- (2018) Alida Kindt et al. Nature Communications
- Bile Acids Activated Receptors Regulate Innate Immunity
- (2018) Stefano Fiorucci et al. Frontiers in Immunology
- The gut microbiota drives the impact of bile acids and fat source in diet on mouse metabolism
- (2018) Sarah Just et al. Microbiome
- Microbial impact on cholesterol and bile acid metabolism: current status and future prospects
- (2018) Aicha Kriaa et al. JOURNAL OF LIPID RESEARCH
- CEU Mass Mediator 3.0: A Metabolite Annotation Tool
- (2018) Alberto Gil-de-la-Fuente et al. JOURNAL OF PROTEOME RESEARCH
- Species-level functional profiling of metagenomes and metatranscriptomes
- (2018) Eric A. Franzosa et al. NATURE METHODS
- Dietary metabolism, the gut microbiome, and heart failure
- (2018) W. H. Wilson Tang et al. Nature Reviews Cardiology
- The UNITE database for molecular identification of fungi: handling dark taxa and parallel taxonomic classifications
- (2018) Rolf Henrik Nilsson et al. NUCLEIC ACIDS RESEARCH
- Gut microbiome structure and metabolic activity in inflammatory bowel disease
- (2018) Eric A. Franzosa et al. Nature Microbiology
- Harmonizing lipidomics: NIST interlaboratory comparison exercise for lipidomics using SRM 1950–Metabolites in Frozen Human Plasma
- (2017) John A. Bowden et al. JOURNAL OF LIPID RESEARCH
- Corrigendum: Shotgun metagenomics, from sampling to analysis
- (2017) Christopher Quince et al. NATURE BIOTECHNOLOGY
- HMDB 4.0: the human metabolome database for 2018
- (2017) David S Wishart et al. NUCLEIC ACIDS RESEARCH
- Chemical transformation of xenobiotics by the human gut microbiota
- (2017) Nitzan Koppel et al. SCIENCE
- Gene Prediction in Metagenomic Fragments with Deep Learning
- (2017) Shao-Wu Zhang et al. Biomed Research International
- Analysing Microbial Community Composition through Amplicon Sequencing: From Sampling to Hypothesis Testing
- (2017) Luisa W. Hugerth et al. Frontiers in Microbiology
- The Bacteroidales produce an N-acylated derivative of glycine with both cholesterol-solubilising and hemolytic activity
- (2017) Alli Lynch et al. Scientific Reports
- MOCAT2: a metagenomic assembly, annotation and profiling framework
- (2016) Jens Roat Kultima et al. BIOINFORMATICS
- The role of cholesterol in membrane fusion
- (2016) Sung-Tae Yang et al. CHEMISTRY AND PHYSICS OF LIPIDS
- Gleaning Insights from Fecal Microbiota Transplantation and Probiotic Studies for the Rational Design of Combination Microbial Therapies
- (2016) Lauren E. Hudson et al. CLINICAL MICROBIOLOGY REVIEWS
- High-resolution phylogenetic microbial community profiling
- (2016) Esther Singer et al. ISME Journal
- Short Term Palmitate Supply Impairs Intestinal Insulin Signaling via Ceramide Production
- (2016) Thi Thu Trang Tran et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Human gut microbes impact host serum metabolome and insulin sensitivity
- (2016) Helle Krogh Pedersen et al. NATURE
- Generation of genome-scale metabolic reconstructions for 773 members of the human gut microbiota
- (2016) Stefanía Magnúsdóttir et al. NATURE BIOTECHNOLOGY
- Fecal metabolome of the Hadza hunter-gatherers: a host-microbiome integrative view
- (2016) Silvia Turroni et al. Scientific Reports
- The Dynamics of the Human Infant Gut Microbiome in Development and in Progression toward Type 1 Diabetes
- (2015) Aleksandar D. Kostic et al. Cell Host & Microbe
- Quantifying Diet-Induced Metabolic Changes of the Human Gut Microbiome
- (2015) Saeed Shoaie et al. Cell Metabolism
- The Gut Microbiome Contributes to a Substantial Proportion of the Variation in Blood LipidsNovelty and Significance
- (2015) Jingyuan Fu et al. CIRCULATION RESEARCH
- Gut microbes promote colonic serotonin production through an effect of short-chain fatty acids on enterochromaffin cells
- (2015) Christopher S. Reigstad et al. FASEB JOURNAL
- Gut Microbial Fatty Acid Metabolites Reduce Triacylglycerol Levels in Hepatocytes
- (2015) Tharnath Nanthirudjanar et al. LIPIDS
- Carnitine in bacterial physiology and metabolism
- (2015) Jamie A. Meadows et al. MICROBIOLOGY-SGM
- Ability of the gut microbiota to produce PUFA-derived bacterial metabolites: Proof of concept in germ-free versus conventionalized mice
- (2015) Céline Druart et al. MOLECULAR NUTRITION & FOOD RESEARCH
- A biosynthetic pathway for a prominent class of microbiota-derived bile acids
- (2015) A Sloan Devlin et al. Nature Chemical Biology
- Endocannabinoids — at the crossroads between the gut microbiota and host metabolism
- (2015) Patrice D. Cani et al. Nature Reviews Endocrinology
- BiGG Models: A platform for integrating, standardizing and sharing genome-scale models
- (2015) Zachary A. King et al. NUCLEIC ACIDS RESEARCH
- Functional metagenomic discovery of bacterial effectors in the human microbiome and isolation of commendamide, a GPCR G2A/132 agonist
- (2015) Louis J. Cohen et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The human gut sterolbiome: bile acid-microbiome endocrine aspects and therapeutics
- (2015) Jason M. Ridlon et al. Acta Pharmaceutica Sinica B
- Specialized Metabolites from the Microbiome in Health and Disease
- (2014) Gil Sharon et al. Cell Metabolism
- Bile acids and the gut microbiome
- (2014) Jason M. Ridlon et al. CURRENT OPINION IN GASTROENTEROLOGY
- Gut Microbial Metabolites of Polyunsaturated Fatty Acids Correlate with Specific Fecal Bacteria and Serum Markers of Metabolic Syndrome in Obese Women
- (2014) Céline Druart et al. LIPIDS
- Strengths and Limitations of 16S rRNA Gene Amplicon Sequencing in Revealing Temporal Microbial Community Dynamics
- (2014) Rachel Poretsky et al. PLoS One
- Elucidating the interactions between the human gut microbiota and its host through metabolic modeling
- (2014) Saeed Shoaie et al. Frontiers in Genetics
- Metabolomic analyses of faeces reveals malabsorption in cirrhotic patients
- (2013) Hai-jun Huang et al. DIGESTIVE AND LIVER DISEASE
- Global gas chromatography/time-of-flight mass spectrometry (GC/TOFMS)-based metabonomic profiling of lyophilized human feces
- (2013) Lee Cheng Phua et al. JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES
- Phospholipid catabolism by gut microbiota and the risk of cardiovascular disease
- (2013) R. Sitaraman JOURNAL OF MEDICAL MICROBIOLOGY
- A Comparison of Methods for Clustering 16S rRNA Sequences into OTUs
- (2013) Wei Chen et al. PLoS One
- Polyunsaturated fatty acid saturation by gut lactic acid bacteria affecting host lipid composition
- (2013) S. Kishino et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Cross-talk between Akkermansia muciniphila and intestinal epithelium controls diet-induced obesity
- (2013) A. Everard et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The RAVEN Toolbox and Its Use for Generating a Genome-scale Metabolic Model for Penicillium chrysogenum
- (2013) Rasmus Agren et al. PLoS Computational Biology
- Method Development for Fecal Lipidomics Profiling
- (2012) Katherine E. Gregory et al. ANALYTICAL CHEMISTRY
- Bile acid profiling in human biological samples: Comparison of extraction procedures and application to normal and cholestatic patients
- (2012) Lydie Humbert et al. JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES
- The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
- (2012) Christian Quast et al. NUCLEIC ACIDS RESEARCH
- Species-Level Analysis of DNA Sequence Data from the NIH Human Microbiome Project
- (2012) Sean Conlan et al. PLoS One
- Pearls and pitfalls of genomics-based microbiome analysis
- (2012) Nossa Carlos et al. Emerging Microbes & Infections
- Presence, formation and putative biological activities of N-acyl serotonins, a novel class of fatty-acid derived mediators, in the intestinal tract
- (2011) Kitty C.M. Verhoeckx et al. BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR AND CELL BIOLOGY OF LIPIDS
- A view on sphingolipids and disease
- (2011) Thomas Kolter CHEMISTRY AND PHYSICS OF LIPIDS
- Development of a Quantitative Metabolomic Approach to Study Clinical Human Fecal Water Metabolome Based on Trimethylsilylation Derivatization and GC/MS Analysis
- (2010) Xianfu Gao et al. ANALYTICAL CHEMISTRY
- The endocannabinoid system links gut microbiota to adipogenesis
- (2010) Giulio G Muccioli et al. Molecular Systems Biology
- Intestinal lipid absorption
- (2009) Jahangir Iqbal et al. AMERICAN JOURNAL OF PHYSIOLOGY-ENDOCRINOLOGY AND METABOLISM
- FiehnLib: Mass Spectral and Retention Index Libraries for Metabolomics Based on Quadrupole and Time-of-Flight Gas Chromatography/Mass Spectrometry
- (2009) Tobias Kind et al. ANALYTICAL CHEMISTRY
- The Expanded Biology of Serotonin
- (2009) Miles Berger et al. Annual Review of Medicine
- Conversion of cholic acid and chenodeoxycholic acid into their 7-oxo derivatives byBacteroides intestinalisAM-1 isolated from human feces
- (2009) Satoru Fukiya et al. FEMS MICROBIOLOGY LETTERS
- MetaBioME: a database to explore commercially useful enzymes in metagenomic datasets
- (2009) Vineet K. Sharma et al. NUCLEIC ACIDS RESEARCH
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