A hitchhiker’s guide to working with large, open-source neuroimaging datasets
Published 2020 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
A hitchhiker’s guide to working with large, open-source neuroimaging datasets
Authors
Keywords
-
Journal
Nature Human Behaviour
Volume -, Issue -, Pages -
Publisher
Springer Science and Business Media LLC
Online
2020-12-08
DOI
10.1038/s41562-020-01005-4
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Eleven tips for working with large data sets
- (2020) Anna Nowogrodzki NATURE
- Time of day is associated with paradoxical reductions in global signal fluctuation and functional connectivity
- (2020) Csaba Orban et al. PLOS BIOLOGY
- Variability in the analysis of a single neuroimaging dataset by many teams
- (2020) Rotem Botvinik-Nezer et al. NATURE
- Optimising network modelling methods for fMRI
- (2020) Usama Pervaiz et al. NEUROIMAGE
- Dataset decay and the problem of sequential analyses on open datasets
- (2020) William Hedley Thompson et al. eLife
- Harmonization of Brain Diffusion MRI: Concepts and Methods
- (2020) Maíra Siqueira Pinto et al. Frontiers in Neuroscience
- Data sharing and privacy issues in neuroimaging research: Opportunities, obstacles, challenges, and monsters under the bed
- (2020) Tonya White et al. HUMAN BRAIN MAPPING
- Confound modelling in UK Biobank brain imaging
- (2020) Fidel Alfaro-Almagro et al. NEUROIMAGE
- Big data approaches to decomposing heterogeneity across the autism spectrum
- (2019) Michael V. Lombardo et al. MOLECULAR PSYCHIATRY
- Be the change you seek in science
- (2019) Michael P. Milham et al. BMC BIOLOGY
- The functional brain organization of an individual allows prediction of measures of social abilities trans-diagnostically in autism and attention/deficit and hyperactivity disorder
- (2019) Evelyn MR. Lake et al. BIOLOGICAL PSYCHIATRY
- Moving to a World Beyond “p
- (2019) Ronald L. Wasserstein et al. AMERICAN STATISTICIAN
- Benchmarking functional connectome-based predictive models for resting-state fMRI
- (2019) Kamalaker Dadi et al. NEUROIMAGE
- Exploration, Inference, and Prediction in Neuroscience and Biomedicine
- (2019) Danilo Bzdok et al. TRENDS IN NEUROSCIENCES
- Harmonization of resting-state functional MRI data across multiple imaging sites via the separation of site differences into sampling bias and measurement bias
- (2019) Ayumu Yamashita et al. PLOS BIOLOGY
- Credit data generators for data reuse
- (2019) Heather H. Pierce et al. NATURE
- Prediction of neurocognition in youth from resting state fMRI
- (2019) Chandra Sripada et al. MOLECULAR PSYCHIATRY
- Identifying Reproducible Individual Differences in Childhood Functional Brain Networks: An ABCD Study
- (2019) Scott Marek et al. Developmental Cognitive Neuroscience
- Image processing and analysis methods for the Adolescent Brain Cognitive Development Study
- (2019) Donald J. Hagler et al. NEUROIMAGE
- Harmonization of large MRI datasets for the analysis of brain imaging patterns throughout the lifespan
- (2019) Raymond Pomponio et al. NEUROIMAGE
- Cluster failure or power failure? Evaluating sensitivity in cluster-level inference
- (2019) Stephanie Noble et al. NEUROIMAGE
- Statistical harmonization corrects site effects in functional connectivity measurements from multi-site fMRI data
- (2018) Meichen Yu et al. HUMAN BRAIN MAPPING
- Harmonization of cortical thickness measurements across scanners and sites
- (2018) Jean-Philippe Fortin et al. NEUROIMAGE
- Statistical Challenges in “Big Data” Human Neuroimaging
- (2018) Stephen M. Smith et al. NEURON
- Task-induced brain state manipulation improves prediction of individual traits
- (2018) Abigail S. Greene et al. Nature Communications
- Assessment of the impact of shared brain imaging data on the scientific literature
- (2018) Michael P. Milham et al. Nature Communications
- The Adolescent Brain Cognitive Development (ABCD) study: Imaging acquisition across 21 sites
- (2018) B.J. Casey et al. Developmental Cognitive Neuroscience
- How to control for confounds in decoding analyses of neuroimaging data
- (2018) Lukas Snoek et al. NEUROIMAGE
- The Parkinson's progression markers initiative (PPMI) – establishing a PD biomarker cohort
- (2018) Kenneth Marek et al. Annals of Clinical and Translational Neurology
- When Null Hypothesis Significance Testing Is Unsuitable for Research: A Reassessment
- (2017) Denes Szucs et al. Frontiers in Human Neuroscience
- Best practices in data analysis and sharing in neuroimaging using MRI
- (2017) Thomas E Nichols et al. NATURE NEUROSCIENCE
- Inference in the age of big data: Future perspectives on neuroscience
- (2017) Danilo Bzdok et al. NEUROIMAGE
- Predictive modelling using neuroimaging data in the presence of confounds
- (2017) Anil Rao et al. NEUROIMAGE
- Benchmarking of participant-level confound regression strategies for the control of motion artifact in studies of functional connectivity
- (2017) Rastko Ciric et al. NEUROIMAGE
- Multisite reliability of MR-based functional connectivity
- (2017) Stephanie Noble et al. NEUROIMAGE
- Is the statistic value all we should care about in neuroimaging?
- (2017) Gang Chen et al. NEUROIMAGE
- Harmonization of multi-site diffusion tensor imaging data
- (2017) Jean-Philippe Fortin et al. NEUROIMAGE
- The Brain Analysis Library of Spatial maps and Atlases (BALSA) database
- (2017) David C. Van Essen et al. NEUROIMAGE
- The Cambridge Centre for Ageing and Neuroscience (Cam-CAN) data repository: Structural and functional MRI, MEG, and cognitive data from a cross-sectional adult lifespan sample
- (2017) Jason R. Taylor et al. NEUROIMAGE
- OpenfMRI: Open sharing of task fMRI data
- (2017) Russell A. Poldrack et al. NEUROIMAGE
- MRIQC: Advancing the automatic prediction of image quality in MRI from unseen sites
- (2017) Oscar Esteban et al. PLoS One
- Empirical assessment of published effect sizes and power in the recent cognitive neuroscience and psychology literature
- (2017) Denes Szucs et al. PLOS BIOLOGY
- Cyberinfrastructure for Open Science at the Montreal Neurological Institute
- (2017) Samir Das et al. Frontiers in Neuroinformatics
- An open resource for transdiagnostic research in pediatric mental health and learning disorders
- (2017) Lindsay M. Alexander et al. Scientific Data
- Enhancing studies of the connectome in autism using the autism brain imaging data exchange II
- (2017) Adriana Di Martino et al. Scientific Data
- The ASA's Statement onp-Values: Context, Process, and Purpose
- (2016) Ronald L. Wasserstein et al. AMERICAN STATISTICIAN
- Multimodal population brain imaging in the UK Biobank prospective epidemiological study
- (2016) Karla L Miller et al. NATURE NEUROSCIENCE
- NeuroVault.org: A repository for sharing unthresholded statistical maps, parcellations, and atlases of the human brain
- (2016) Krzysztof J. Gorgolewski et al. NEUROIMAGE
- OMEGA: The Open MEG Archive
- (2016) Guiomar Niso et al. NEUROIMAGE
- The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments
- (2016) Krzysztof J. Gorgolewski et al. Scientific Data
- Collaboration and Team Science
- (2016) L. Michelle Bennett et al. JOURNAL OF INVESTIGATIVE MEDICINE
- Brain Genomics Superstruct Project initial data release with structural, functional, and behavioral measures
- (2015) Avram J. Holmes et al. Scientific Data
- 1910s' brains revisited. Cortical complexity in early 20th century patients with intellectual disability or with dementia praecox
- (2014) A.-L. Sandu et al. ACTA PSYCHIATRICA SCANDINAVICA
- The Cambridge Centre for Ageing and Neuroscience (Cam-CAN) study protocol: a cross-sectional, lifespan, multidisciplinary examination of healthy cognitive ageing
- (2014) Meredith A Shafto et al. BMC Neurology
- The ENIGMA Consortium: large-scale collaborative analyses of neuroimaging and genetic data
- (2014) Paul M. Thompson et al. Brain Imaging and Behavior
- Generation and Evaluation of a Cortical Area Parcellation from Resting-State Correlations
- (2014) Evan M. Gordon et al. CEREBRAL CORTEX
- Big Data and Large Sample Size: A Cautionary Note on the Potential for Bias
- (2014) Robert M. Kaplan et al. CTS-Clinical and Translational Science
- Making big data open: data sharing in neuroimaging
- (2014) Russell A Poldrack et al. NATURE NEUROSCIENCE
- Studying variability in human brain aging in a population-based German cohort—rationale and design of 1000BRAINS
- (2014) Svenja Caspers et al. Frontiers in Aging Neuroscience
- Challenges of Big Data analysis
- (2014) Jianqing Fan et al. National Science Review
- An open science resource for establishing reliability and reproducibility in functional connectomics
- (2014) Xi-Nian Zuo et al. Scientific Data
- Overview of potential procedural and participant- related confounds for neuroimaging of the resting state
- (2013) Niall Duncan et al. JOURNAL OF PSYCHIATRY & NEUROSCIENCE
- The autism brain imaging data exchange: towards a large-scale evaluation of the intrinsic brain architecture in autism
- (2013) A Di Martino et al. MOLECULAR PSYCHIATRY
- Power failure: why small sample size undermines the reliability of neuroscience
- (2013) Katherine S. Button et al. NATURE REVIEWS NEUROSCIENCE
- The ethics of secondary data analysis: Considering the application of Belmont principles to the sharing of neuroimaging data
- (2013) Beth Brakewood et al. NEUROIMAGE
- The WU-Minn Human Connectome Project: An overview
- (2013) David C. Van Essen et al. NEUROIMAGE
- Function in the human connectome: Task-fMRI and individual differences in behavior
- (2013) Deanna M. Barch et al. NEUROIMAGE
- Neuroimaging of the Philadelphia Neurodevelopmental Cohort
- (2013) Theodore D. Satterthwaite et al. NEUROIMAGE
- Toward open sharing of task-based fMRI data: the OpenfMRI project
- (2013) Russell A. Poldrack et al. Frontiers in Neuroinformatics
- Making data sharing work: The FCP/INDI experience
- (2012) Maarten Mennes et al. NEUROIMAGE
- Age group and sex differences in performance on a computerized neurocognitive battery in children age 8−21.
- (2012) Ruben C. Gur et al. NEUROPSYCHOLOGY
- LORIS: a web-based data management system for multi-center studies
- (2012) Samir Das et al. Frontiers in Neuroinformatics
- Data sharing in neuroimaging research
- (2012) Jean-Baptiste Poline et al. Frontiers in Neuroinformatics
- A Multisite Study of the Clinical Diagnosis of Different Autism Spectrum Disorders
- (2011) Catherine Lord ARCHIVES OF GENERAL PSYCHIATRY
- The Parkinson Progression Marker Initiative (PPMI)
- (2011) Kenneth Marek et al. PROGRESS IN NEUROBIOLOGY
- COINS: An Innovative Informatics and Neuroimaging Tool Suite Built for Large Heterogeneous Datasets
- (2011) Adam Scott et al. Frontiers in Neuroinformatics
- The Simons Simplex Collection: A Resource for Identification of Autism Genetic Risk Factors
- (2010) Gerald D. Fischbach et al. NEURON
- Toward discovery science of human brain function
- (2010) B. B. Biswal et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Worsening file-drawer problem in the abstracts of natural, medical and social science databases
- (2010) Marco Pautasso SCIENTOMETRICS
- Neuroimaging Informatics Tools and Resources Clearinghouse (NITRC) Resource Announcement
- (2009) Xiao-zhong James Luo et al. NEUROINFORMATICS
Find the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
SearchBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started