Virus and Viroid-Derived Small RNAs as Modulators of Host Gene Expression: Molecular Insights Into Pathogenesis
Published 2021 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Virus and Viroid-Derived Small RNAs as Modulators of Host Gene Expression: Molecular Insights Into Pathogenesis
Authors
Keywords
-
Journal
Frontiers in Microbiology
Volume 11, Issue -, Pages -
Publisher
Frontiers Media SA
Online
2021-01-14
DOI
10.3389/fmicb.2020.614231
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Tomato auxin biosynthesis/signaling is reprogrammed by the geminivirus to enhance its pathogenicity
- (2020) T. Vinutha et al. PLANTA
- LncRNA expression profile and ceRNA analysis in tomato during flowering
- (2019) Zhenchao Yang et al. PLoS One
- Genome‐wide analysis of small RNAs from Odontoglossum ringspot virus and Cymbidium mosaic virus synergistically infecting Phalaenopsis
- (2019) Hsuan Pai et al. MOLECULAR PLANT PATHOLOGY
- Chinese wheat mosaic virus ‐derived vsiRNA‐20 can regulate virus infection in wheat through inhibition of vacuolar‐ (H + )‐PPase induced cell death
- (2019) Jian Yang et al. NEW PHYTOLOGIST
- Dynamics of a geminivirus-encoded pre-coat protein and host RNA-dependent RNA polymerase 1 in regulating symptom recovery in tobacco
- (2018) Saumik Basu et al. JOURNAL OF EXPERIMENTAL BOTANY
- Arabidopsis RNA Polymerase V Mediates Enhanced Compaction and Silencing of Geminivirus and Transposon Chromatin during Host Recovery from Infection
- (2018) Tami Coursey et al. JOURNAL OF VIROLOGY
- Viroid derived small RNA induces early flowering in tomato plants by RNA silencing
- (2018) Charith Raj Adkar-Purushothama et al. MOLECULAR PLANT PATHOLOGY
- A virus-targeted plant receptor-like kinase promotes cell-to-cell spread of RNAi
- (2018) Tabata Rosas-Diaz et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Alterations of the viroid regions that interact with the host defense genes attenuate viroid infection in host plant
- (2018) Charith Raj Adkar-Purushothama et al. RNA Biology
- Profile of siRNAs derived from green fluorescent protein (GFP)-tagged Papaya leaf distortion mosaic virus in infected papaya plants
- (2018) Guangyuan Zhao et al. VIRUS GENES
- Pospiviroid Infection of Tomato Regulates the Expression of Genes Involved in Flower and Fruit Development
- (2018) Katia Aviña-Padilla et al. Viruses-Basel
- OUP accepted manuscript
- (2018) Database-The Journal of Biological Databases and Curation
- Rice stripe virus-derived siRNAs play different regulatory roles in rice and in the insect vector Laodelphax striatellus
- (2018) Meiling Yang et al. BMC PLANT BIOLOGY
- Genome-Wide Transcriptomic Analysis Reveals Insights into the Response to Citrus bark cracking viroid (CBCVd) in Hop (Humulus lupulus L.)
- (2018) Ajay Mishra et al. Viruses-Basel
- Innate Immunity Activation and RNAi Interplay in Citrus Exocortis Viroid—Tomato Pathosystem
- (2018) Olivier Thibaut et al. Viruses-Basel
- Small RNA-Omics for Plant Virus Identification, Virome Reconstruction, and Antiviral Defense Characterization
- (2018) Mikhail M. Pooggin Frontiers in Microbiology
- Comprehensive Transcriptome Analyses Reveal that Potato Spindle Tuber Viroid Triggers Genome-Wide Changes in Alternative Splicing, Inducible trans -Acting Activity of Phased Secondary Small Interfering RNAs, and Immune Responses
- (2017) Yi Zheng et al. JOURNAL OF VIROLOGY
- Identification of a New Host Factor Required for Antiviral RNAi and Amplification of Viral siRNAs
- (2017) Zhongxin Guo et al. PLANT PHYSIOLOGY
- Lipid flippases promote antiviral silencing and the biogenesis of viral and host siRNAs inArabidopsis
- (2017) Zhongxin Guo et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Nicotiana benthamiana plants asymptomatically infected by Pelargonium line pattern virus show unusually high accumulation of viral small RNAs that is neither associated with DCL induction nor RDR6 activity
- (2017) Miryam Pérez-Cañamás et al. VIROLOGY
- The effects of potato virus Y-derived virus small interfering RNAs of three biologically distinct strains on potato (Solanum tuberosum) transcriptome
- (2017) Lindani Moyo et al. Virology Journal
- Characteristics of siRNAs derived from Southern rice black-streaked dwarf virus in infected rice and their potential role in host gene regulation
- (2017) Donglin Xu et al. Virology Journal
- Transcriptome-wide identification of host genes targeted by tomato spotted wilt virus-derived small interfering RNAs
- (2017) Shunmugiah V. Ramesh et al. VIRUS RESEARCH
- Potato spindle tuber viroid infection triggers degradation of chloride channel protein CLC-b-like and Ribosomal protein S3a-like mRNAs in tomato plants
- (2017) Charith Raj Adkar-Purushothama et al. Scientific Reports
- Synergistic infection of BrYV and PEMV 2 increases the accumulations of both BrYV and BrYV-derived siRNAs in Nicotiana benthamiana
- (2017) Cui-Ji Zhou et al. Scientific Reports
- Cucumber mosaic virus coat protein modulates the accumulation of 2b protein and antiviral silencing that causes symptom recovery in planta
- (2017) Xiao-Peng Zhang et al. PLoS Pathogens
- The Potyvirus Silencing Suppressor Protein VPg Mediates Degradation of SGS3 via Ubiquitination and Autophagy Pathways
- (2016) Xiaofei Cheng et al. JOURNAL OF VIROLOGY
- Deep sequencing leads to the identification of eukaryotic translation initiation factor 5A as a key element in Rsv1 -mediated lethal systemic hypersensitive response to Soybean mosaic virus infection in soybean
- (2016) Hui Chen et al. MOLECULAR PLANT PATHOLOGY
- Noncoding RNAs of Plant Viruses and Viroids: Sponges of Host Translation and RNA Interference Machinery
- (2016) W. Allen Miller et al. MOLECULAR PLANT-MICROBE INTERACTIONS
- A pathogenic long noncoding RNA redesigns the epigenetic landscape of the infected cells by subverting host Histone Deacetylase 6 activity
- (2016) Mayte Castellano et al. NEW PHYTOLOGIST
- Mobile small RNAs regulate genome-wide DNA methylation
- (2016) Mathew G. Lewsey et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Essential RNA-Based Technologies and Their Applications in Plant Functional Genomics
- (2016) Sachin Teotia et al. TRENDS IN BIOTECHNOLOGY
- Plant subviral RNAs as a long noncoding RNA (lncRNA): Analogy with animal lncRNAs in host–virus interactions
- (2016) Hanako Shimura et al. VIRUS RESEARCH
- A Viral Noncoding RNA Complements a Weakened Viral RNA Silencing Suppressor and Promotes Efficient Systemic Host Infection
- (2016) Alyssa Flobinus et al. Viruses-Basel
- Synergistic infection of two viruses MCMV and SCMV increases the accumulations of both MCMV and MCMV-derived siRNAs in maize
- (2016) Zihao Xia et al. Scientific Reports
- Cotton Leaf Curl Multan Virus-Derived Viral Small RNAs Can Target Cotton Genes to Promote Viral Infection
- (2016) Jinyan Wang et al. Frontiers in Plant Science
- RNA-dependent RNA polymerase 1 in potato (Solanum tuberosum) and its relationship to other plant RNA-dependent RNA polymerases
- (2016) Lydia J. R. Hunter et al. Scientific Reports
- Characterization of siRNAs derived from cucumber green mottle mosaic virus in infected cucumber plants
- (2015) Yongqiang Li et al. ARCHIVES OF VIROLOGY
- Evolution, functions, and mysteries of plant ARGONAUTE proteins
- (2015) Han Zhang et al. CURRENT OPINION IN PLANT BIOLOGY
- In silico prediction and validation of potential gene targets for pospiviroid-derived small RNAs during tomato infection
- (2015) Katia Avina-Padilla et al. GENE
- Identification and regulation of host genes related toRice stripe virussymptom production
- (2015) Bingbin Shi et al. NEW PHYTOLOGIST
- FDF-PAGE: a powerful technique revealing previously undetected small RNAs sequestered by complementary transcripts
- (2015) C. Jake Harris et al. NUCLEIC ACIDS RESEARCH
- Small RNA Derived from the Virulence Modulating Region of thePotato spindle tuber viroidSilencescallose synthaseGenes of Tomato Plants
- (2015) Charith Raj Adkar-Purushothama et al. PLANT CELL
- Epigenetic transitions leading to heritable, RNA-mediated de novo silencing inArabidopsis thaliana
- (2015) Donna M. Bond et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Symptom recovery in virus-infected plants: Revisiting the role of RNA silencing mechanisms
- (2015) Basudev Ghoshal et al. VIROLOGY
- Prediction and characterization of Tomato leaf curl New Delhi virus (ToLCNDV) responsive novel microRNAs in Solanum lycopersicum
- (2015) Bhubaneswar Pradhan et al. VIRUS RESEARCH
- Host Recovery and Reduced Virus Level in the Upper Leaves after Potato virus Y Infection Occur in Tobacco and Tomato but not in Potato Plants
- (2015) Xianzhou Nie et al. Viruses-Basel
- Changes in relative expression levels of viroid-specific small RNAs and microRNAs in tomato plants infected with severe and mild symptom-inducing isolates of Potato spindle tuber viroid
- (2014) Daiki Tsushima et al. JOURNAL OF GENERAL PLANT PATHOLOGY
- The P25 Protein of Potato Virus X (PVX) Is the Main Pathogenicity Determinant Responsible for Systemic Necrosis in PVX-Associated Synergisms
- (2014) Emmanuel Aguilar et al. JOURNAL OF VIROLOGY
- Roles of plant hormones in the regulation of host-virus interactions
- (2014) Mazen Alazem et al. MOLECULAR PLANT PATHOLOGY
- Light intensity and temperature affect systemic spread of silencing signal in transient agroinfiltration studies
- (2014) Basavaprabhu L. Patil et al. MOLECULAR PLANT PATHOLOGY
- Identification of TaWD40D, a wheat WD40 repeat-containing protein that is associated with plant tolerance to abiotic stresses
- (2014) Dejing Kong et al. PLANT CELL REPORTS
- Characterization of Small Interfering RNAs Derived from Sugarcane Mosaic Virus in Infected Maize Plants by Deep Sequencing
- (2014) Zihao Xia et al. PLoS One
- Virus versus Host Plant MicroRNAs: Who Determines the Outcome of the Interaction?
- (2014) Fatemeh Maghuly et al. PLoS One
- Virus infection triggers widespread silencing of host genes by a distinct class of endogenous siRNAs inArabidopsis
- (2014) Mengji Cao et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- In Nicotiana species, an artificial microRNA corresponding to the virulence modulating region of Potato spindle tuber viroid directs RNA silencing of a soluble inorganic pyrophosphatase gene and the development of abnormal phenotypes
- (2014) Andrew L. Eamens et al. VIROLOGY
- Plant miRNAome and antiviral resistance: a retrospective view and prospective challenges
- (2014) Shunmugiah Veluchamy Ramesh et al. VIRUS GENES
- The Rumsfeld paradox: some of the things we know that we don’t know about plant virus infection
- (2013) Peter Palukaitis et al. CURRENT OPINION IN PLANT BIOLOGY
- The WD40-Repeat Proteins NFC101 and NFC102 Regulate Different Aspects of Maize Development through Chromatin Modification
- (2013) I. Mascheretti et al. PLANT CELL
- Identification and validation of sugarcane streak mosaic virus-encoded microRNAs and their targets in sugarcane
- (2013) Chandran Viswanathan et al. PLANT CELL REPORTS
- Fungal Small RNAs Suppress Plant Immunity by Hijacking Host RNA Interference Pathways
- (2013) Arne Weiberg et al. SCIENCE
- Virus-Encoded microRNAs: An Overview and a Look to the Future
- (2013) Rodney P. Kincaid et al. PLoS Pathogens
- Genome-wide identification of viral and host transcripts targeted by viral siRNAs inVitis vinifera
- (2012) Laura Miozzi et al. MOLECULAR PLANT PATHOLOGY
- Small RNAs containing the pathogenic determinant of a chloroplast-replicating viroid guide the degradation of a host mRNA as predicted by RNA silencing
- (2012) Beatriz Navarro et al. PLANT JOURNAL
- Identification of a Plant Viral RNA Genome in the Nucleus
- (2012) Ruimin Gao et al. PLoS One
- RNA virus microRNA that mimics a B-cell oncomiR
- (2012) R. P. Kincaid et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Intercellular and systemic movement of RNA silencing signals
- (2011) Charles W Melnyk et al. EMBO JOURNAL
- How do plant viruses induce disease? Interactions and interference with host components
- (2011) V. Pallas et al. JOURNAL OF GENERAL VIROLOGY
- Satellite RNA-Derived Small Interfering RNA satsiR-12 Targeting the 3' Untranslated Region of Cucumber Mosaic Virus Triggers Viral RNAs for Degradation
- (2011) H. Zhu et al. JOURNAL OF VIROLOGY
- Massive production of small RNAs from a non-coding region of Cauliflower mosaic virus in plant defense and viral counter-defense
- (2011) Todd Blevins et al. NUCLEIC ACIDS RESEARCH
- Arabidopsis DRB4 protein in antiviral defense against Turnip yellow mosaic virus infection
- (2011) Anna Jakubiec et al. PLANT JOURNAL
- Viral Small Interfering RNAs Target Host Genes to Mediate Disease Symptoms in Plants
- (2011) Neil A. Smith et al. PLoS Pathogens
- Suppression of Methylation-Mediated Transcriptional Gene Silencing by βC1-SAHH Protein Interaction during Geminivirus-Betasatellite Infection
- (2011) Xiuling Yang et al. PLoS Pathogens
- A Viral Satellite RNA Induces Yellow Symptoms on Tobacco by Targeting a Gene Involved in Chlorophyll Biosynthesis using the RNA Silencing Machinery
- (2011) Hanako Shimura et al. PLoS Pathogens
- Viruses, microRNAs, and Host Interactions
- (2010) Rebecca L. Skalsky et al. Annual Review of Microbiology
- RNA silencing directed against geminiviruses: Post-transcriptional and epigenetic components
- (2010) Priya Raja et al. Biochimica et Biophysica Acta-Gene Regulatory Mechanisms
- Plant virus-mediated induction of miR168 is associated with repression of ARGONAUTE1 accumulation
- (2010) Éva Várallyay et al. EMBO JOURNAL
- Argonaute quenching and global changes in Dicer homeostasis caused by a pathogen-encoded GW repeat protein
- (2010) J. Azevedo et al. GENES & DEVELOPMENT
- Marek's Disease Virus Type 1 MicroRNA miR-M3 Suppresses Cisplatin-Induced Apoptosis by Targeting SMAD2 of the Transforming Growth Factor Beta Signal Pathway
- (2010) S. Xu et al. JOURNAL OF VIROLOGY
- Antiviral Role of Plant-Encoded RNA-Dependent RNA Polymerases Revisited with Deep Sequencing of Small Interfering RNAs of Virus Origin
- (2010) Feng Qu MOLECULAR PLANT-MICROBE INTERACTIONS
- Functional microRNA generated from a cytoplasmic RNA virus
- (2010) Harald Rouha et al. NUCLEIC ACIDS RESEARCH
- Bacteria-responsive microRNAs regulate plant innate immunity by modulating plant hormone networks
- (2010) Weixiong Zhang et al. PLANT MOLECULAR BIOLOGY
- Cytomegalovirus microRNAs Facilitate Persistent Virus Infection in Salivary Glands
- (2010) Lars Dölken et al. PLoS Pathogens
- Structural and Functional Analysis of Viral siRNAs
- (2010) Gyorgy Szittya et al. PLoS Pathogens
- Selective modification of rice (Oryza sativa) gene expression by rice stripe virus infection
- (2009) K. Satoh et al. JOURNAL OF GENERAL VIROLOGY
- Viral and cellular messenger RNA targets of viral microRNAs
- (2009) Bryan R. Cullen NATURE
- Small RNA Deep Sequencing Reveals Role for Arabidopsis thaliana RNA-Dependent RNA Polymerases in Viral siRNA Biogenesis
- (2009) Xiaopeng Qi et al. PLoS One
- RNAi-mediated viral immunity requires amplification of virus-derived siRNAs in Arabidopsis thaliana
- (2009) X.-B. Wang et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Silencing potential of viral derived RNAi constructs in Tomato leaf curl virus-AC4 gene suppression in tomato
- (2009) Shelly Praveen et al. TRANSGENIC RESEARCH
- Viroid-Induced Symptoms in Nicotiana benthamiana Plants Are Dependent on RDR6 Activity
- (2008) G. Gomez et al. PLANT PHYSIOLOGY
- The FHA domain proteins DAWDLE in Arabidopsis and SNIP1 in humans act in small RNA biogenesis
- (2008) B. Yu et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now