Gut Microbiota in Dholes During Estrus

A New Alignment-Free Whole Metagenome Comparison Tool and Its Application on Gut Microbiomes of Wild Giant Pandas

(2020) Jiuhong Dong et al.   Frontiers in Microbiology

The neuroactive potential of the human gut microbiota in quality of life and depression

(2019) Mireia Valles-Colomer et al.   Nature Microbiology

Microbiomes as sources of emergent host phenotypes

(2019) J. B. Lynch et al.   SCIENCE

Engineering cellulolytic bacterium Clostridium thermocellum to co-ferment cellulose- and hemicellulose-derived sugars simultaneously

(2018) Wei Xiong et al.   BIOTECHNOLOGY AND BIOENGINEERING

Adaptive evolution to a high purine and fat diet of carnivorans revealed by gut microbiomes and host genomes

(2018) Lifeng Zhu et al.   ENVIRONMENTAL MICROBIOLOGY

An exclusive metabolic niche enables strain engraftment in the gut microbiota

(2018) Elizabeth Stanley Shepherd et al.   NATURE

The Microbial Community in the Feces of Cape Oryx (Oryx gazella) as Determined by High-throughput Illumina Sequencing Technology

(2018) Jun Chen et al.   PAKISTAN JOURNAL OF ZOOLOGY

Libra: scalable k-mer based tool for massive all-vs-all metagenome comparisons

(2018) Illyoung Choi et al.   GigaScience

Brain Structure and Response to Emotional Stimuli as Related to Gut Microbial Profiles in Healthy Women

(2017) Kirsten Tillisch et al.   PSYCHOSOMATIC MEDICINE

Wearable wireless estrus detection sensor for cows

(2016) L. Mattias Andersson et al.   COMPUTERS AND ELECTRONICS IN AGRICULTURE

Cellulose and hemicellulose decomposition by forest soil bacteria proceeds by the action of structurally variable enzymatic systems

(2016) Rubén López-Mondéjar et al.   Scientific Reports

Dynamics and Stabilization of the Human Gut Microbiome during the First Year of Life

(2015) Fredrik Bäckhed et al.   Cell Host & Microbe

The composition of the zebrafish intestinal microbial community varies across development

(2015) W Zac Stephens et al.   ISME Journal

Cecum microbial communities from steers differing in feed efficiency1,2,3

(2015) P. R. Myer et al.   JOURNAL OF ANIMAL SCIENCE

Structure and function of the global ocean microbiome

(2015) S. Sunagawa et al.   SCIENCE

Patterns and ecological drivers of ocean viral communities

(2015) J. R. Brum et al.   SCIENCE

The Effects of Freezing on Faecal Microbiota as Determined Using MiSeq Sequencing and Culture-Based Investigations

(2015) Fiona Fouhy et al.   PLoS One

Sources of variance in a female fertility signal: exaggerated estrous swellings in a natural population of baboons

(2014) Courtney L. Fitzpatrick et al.   BEHAVIORAL ECOLOGY AND SOCIOBIOLOGY

Alterations of the human gut microbiome in liver cirrhosis

(2014) Nan Qin et al.   NATURE

An integrated catalog of reference genes in the human gut microbiome

(2014) Junhua Li et al.   NATURE BIOTECHNOLOGY

Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes

(2014) H Bjørn Nielsen et al.   NATURE BIOTECHNOLOGY

Leptin at the Intersection of Neuroendocrinology and Metabolism: Current Evidence and Therapeutic Perspectives

(2013) Maria Dalamaga et al.   Cell Metabolism

De novo Semi-alignment of 16S rRNA Gene Sequences for Deep Phylogenetic Characterization of Next Generation Sequencing Data

(2013) Ekaterina Avershina et al.   MICROBES AND ENVIRONMENTS

Data, information, knowledge and principle: back to metabolism in KEGG

(2013) Minoru Kanehisa et al.   NUCLEIC ACIDS RESEARCH

Identification of Hepatotropic Viruses from Plasma Using Deep Sequencing: A Next Generation Diagnostic Tool

(2013) John Law et al.   PLoS One

Non-contiguous finished genome sequence and description of Holdemania massiliensis sp. nov.

(2013) Ajay Kumar Mishra et al.   Standards in Genomic Sciences

Expansion of intestinal Prevotella copri correlates with enhanced susceptibility to arthritis

(2013) Jose U Scher et al.   eLife

CD-HIT: accelerated for clustering the next-generation sequencing data

(2012) Limin Fu et al.   BIOINFORMATICS

A microbiota signature associated with experimental food allergy promotes allergic sensitization and anaphylaxis

(2012) Magali Noval Rivas et al.   JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY

A metagenome-wide association study of gut microbiota in type 2 diabetes

(2012) Junjie Qin et al.   NATURE

SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler

(2012) Ruibang Luo et al.   GigaScience

Factors Affecting Urine Washing Behavior in Tufted Capuchins (Cebus apella)

(2011) Gabriele Schino et al.   INTERNATIONAL JOURNAL OF PRIMATOLOGY

Unravelling the effects of the environment and host genotype on the gut microbiome

(2011) Aymé Spor et al.   NATURE REVIEWS MICROBIOLOGY

Manipulation of FASTQ data with Galaxy

(2010) D. Blankenberg et al.   BIOINFORMATICS

A human gut microbial gene catalogue established by metagenomic sequencing

(2010) Junjie Qin et al.   NATURE

Gut Microbiota in Health and Disease

(2010) Inna Sekirov et al.   PHYSIOLOGICAL REVIEWS

The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics

(2008) B. L. Cantarel et al.   NUCLEIC ACIDS RESEARCH