Mutations altering acetylated residues in the CTD of HIV-1 integrase cause defects in proviral transcription at early times after integration of viral DNA

Integrase-RNA interactions underscore the critical role of integrase in HIV-1 virion morphogenesis

(2020) Jennifer L Elliott et al.   eLife

Histone deacetylase 1 interacts with HIV-1 Integrase and modulates viral replication

(2019) Fadila Larguet et al.   Virology Journal

The free energy landscape of retroviral integration

(2019) Willem Vanderlinden et al.   Nature Communications

Spatially clustered loci with multiple enhancers are frequent targets of HIV-1 integration

(2019) Bojana Lucic et al.   Nature Communications

NP220 mediates silencing of unintegrated retroviral DNA

(2018) Yiping Zhu et al.   NATURE

Characterizing HIV-1 Splicing by Using Next-Generation Sequencing

(2017) Ann Emery et al.   JOURNAL OF VIROLOGY

Integration site selection by retroviruses and transposable elements in eukaryotes

(2017) Tania Sultana et al.   NATURE REVIEWS GENETICS

Selection for avian leukosis virus integration sites determines the clonal progression of B-cell lymphomas

(2017) Sanandan Malhotra et al.   PLoS Pathogens

Getting IN on Viral RNA Condensation and Virion Maturation

(2016) Eric O. Freed   CELL

HIV-1 Integrase Binds the Viral RNA Genome and Is Essential during Virion Morphogenesis

(2016) Jacques J. Kessl et al.   CELL

Histones Are Rapidly Loaded onto Unintegrated Retroviral DNAs Soon after Nuclear Entry

(2016) Gary Z. Wang et al.   Cell Host & Microbe

GPS-PAIL: prediction of lysine acetyltransferase-specific modification sites from protein sequences

(2016) Wankun Deng et al.   Scientific Reports

Distribution and Redistribution of HIV-1 Nucleocapsid Protein in Immature, Mature, and Integrase-Inhibited Virions: a Role for Integrase in Maturation

(2015) Juan Fontana et al.   JOURNAL OF VIROLOGY

An RNA polymerase III subunit determines sites of retrotransposon integration

(2015) A. Bridier-Nahmias et al.   SCIENCE

Common Viral Integration Sites Identified in Avian Leukosis Virus-Induced B-Cell Lymphomas

(2015) James F. Justice et al.   mBio

Molecular mechanisms of retroviral integration site selection

(2014) Mamuka Kvaratskhelia et al.   NUCLEIC ACIDS RESEARCH

Master Transcription Factors and Mediator Establish Super-Enhancers at Key Cell Identity Genes

(2013) Warren A. Whyte et al.   CELL

BET proteins promote efficient murine leukemia virus integration at transcription start sites

(2013) A. Sharma et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Reactivation of latent HIV by histone deacetylase inhibitors

(2013) Kotaro Shirakawa et al.   TRENDS IN MICROBIOLOGY

Posttranslational Modifications of HIV-1 Integrase by Various Cellular Proteins during Viral Replication

(2013) Yingfeng Zheng et al.   Viruses-Basel

The BET Family of Proteins Targets Moloney Murine Leukemia Virus Integration near Transcription Start Sites

(2013) Jan De Rijck et al.   Cell Reports

MuLV IN mutants responsive to HDAC inhibitors enhance transcription from unintegrated retroviral DNA

(2012) William M. Schneider et al.   VIROLOGY

The TRIM Family Protein KAP1 Inhibits HIV-1 Integration

(2011) Awatef Allouch et al.   Cell Host & Microbe

In Vitro DNA Tethering of HIV-1 Integrase by the Transcriptional Coactivator LEDGF/p75

(2011) Melissa McNeely et al.   JOURNAL OF MOLECULAR BIOLOGY

The HIV-1 Tat Protein Has a Versatile Role in Activating Viral Transcription

(2011) A. T. Das et al.   JOURNAL OF VIROLOGY

Epigenetic Silencing of HIV-1 by the Histone H3 Lysine 27 Methyltransferase Enhancer of Zeste 2

(2011) J. Friedman et al.   JOURNAL OF VIROLOGY

BEDTools: a flexible suite of utilities for comparing genomic features

(2010) Aaron R. Quinlan et al.   BIOINFORMATICS

GCN5-dependent acetylation of HIV-1 integrase enhances viral integration

(2010) Mariaelena Terreni et al.   Retrovirology

A role for the histone deacetylase HDAC4 in the life-cycle of HIV-1-based vectors

(2010) Johanna A Smith et al.   Virology Journal

Histone deacetylase inhibitors and HIV latency

(2010) David M Margolis   Current Opinion in HIV and AIDS

Identification of cellular factors binding to acetylated HIV-1 integrase

(2009) Awatef Allouch et al.   AMINO ACIDS

HIV-1 acetylated integrase is targeted by KAP1 (TRIM28) to inhibit viral integration

(2009) Awatef Allouch et al.   Retrovirology

Recruitment of a SAP18-HDAC1 Complex into HIV-1 Virions and Its Requirement for Viral Replication

(2009) Masha Sorin et al.   PLoS Pathogens

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY