Effects of Agricultural Fungicide Use on Aspergillus fumigatus Abundance, Antifungal Susceptibility, and Population Structure

Fungicide-driven alterations in azole-resistant Aspergillus fumigatus are related to vegetable crops in Colombia, South America

(2019) Carlos Alvarez-Moreno et al.   MYCOLOGIA

Interactive Tree Of Life (iTOL) v4: recent updates and new developments

(2019) Ivica Letunic et al.   NUCLEIC ACIDS RESEARCH

Elevated prevalence of azole resistant Aspergillus fumigatus in urban versus rural environments in the United Kingdom

(2019) Thomas R Sewell et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Rapid Worldwide Emergence of Pathogenic Fungi

(2019) Johanna Rhodes   Cell Host & Microbe

In-host microevolution of Aspergillus fumigatus : A phenotypic and genotypic analysis

(2018) Eloise Ballard et al.   FUNGAL GENETICS AND BIOLOGY

Triazole resistance surveillance in Aspergillus fumigatus

(2018) Agustin Resendiz Sharpe et al.   MEDICAL MYCOLOGY

Worldwide emergence of resistance to antifungal drugs challenges human health and food security

(2018) Matthew C. Fisher et al.   SCIENCE

Genome-Wide Comparative Analysis of Aspergillus fumigatus Strains: The Reference Genome as a Matter of Concern

(2018) Rocio Garcia-Rubio et al.   Genes

How to: EUCAST recommendations on the screening procedure E.Def 10.1 for the detection of azole resistance in Aspergillus fumigatus isolates using four well azole-containing agar plates

(2018) J. Guinea et al.   CLINICAL MICROBIOLOGY AND INFECTION

Multicentre validation of 4-well azole agar plates as a screening method for detection of clinically relevant azole-resistant Aspergillus fumigatus

(2017) Maiken Cavling Arendrup et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Azole-resistant Aspergillus fumigatus in sawmills of Eastern France

(2017) A. Jeanvoine et al.   JOURNAL OF APPLIED MICROBIOLOGY

Simulations of CYP51A from Aspergillus fumigatus in a model bilayer provide insights into triazole drug resistance

(2017) Anthony Nash et al.   MEDICAL MYCOLOGY

A Novel Environmental Azole Resistance Mutation in Aspergillus fumigatus and a Possible Role of Sexual Reproduction in Its Emergence

(2017) Jianhua Zhang et al.   mBio

Azole Resistance in Aspergillus fumigatus: A Consequence of Antifungal Use in Agriculture?

(2017) Sarah Berger et al.   Frontiers in Microbiology

Azole-resistant Aspergillus fumigatus harboring TR34/L98H, TR46/Y121F/T289A and TR53 mutations related to flower fields in Colombia

(2017) Carlos Alvarez-Moreno et al.   Scientific Reports

Executive Summary: Practice Guidelines for the Diagnosis and Management of Aspergillosis: 2016 Update by the Infectious Diseases Society of America

(2016) Thomas F. Patterson et al.   CLINICAL INFECTIOUS DISEASES

cyp51A-based mechanism of azole resistance inAspergillus fumigatus: Illustration by a new 3D Structural Model ofAspergillus fumigatusCYP51A protein

(2016) Musang Liu et al.   MEDICAL MYCOLOGY

Clinical implications of globally emerging azole resistance inAspergillus fumigatus

(2016) Jacques F. Meis et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Environmental Isolates of Azole-Resistant Aspergillus fumigatus in Germany

(2015) Oliver Bader et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Emergence of azole-resistant invasive aspergillosis in HSCT recipients in Germany

(2015) J. Steinmann et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Azole fungicides - understanding resistance mechanisms in agricultural fungal pathogens

(2015) Claire L Price et al.   PEST MANAGEMENT SCIENCE

Genomic Context of Azole Resistance Mutations in Aspergillus fumigatus Determined Using Whole-Genome Sequencing

(2015) Alireza Abdolrasouli et al.   mBio

Azole-resistant Aspergillus fumigatus in the environment of northern Italy, May 2011 to June 2012

(2014) A Prigitano et al.   Eurosurveillance

Antifungal drug resistance evoked via RNAi-dependent epimutations

(2014) Silvia Calo et al.   NATURE

cyp51A-Based Mechanisms of Aspergillus fumigatus Azole Drug Resistance Present in Clinical Samples from Germany

(2013) Oliver Bader et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Calculation of Tajima’s D and other neutrality test statistics from low depth next-generation sequencing data

(2013) Thorfinn Sand Korneliussen et al.   BMC BIOINFORMATICS

Environmental fungicides and triazole resistance inAspergillus

(2013) Paul Bowyer et al.   PEST MANAGEMENT SCIENCE

Assessment of selection and resistance risk for demethylation inhibitor fungicides inAspergillus fumigatusin agriculture and medicine: a critical review

(2013) Ulrich Gisi   PEST MANAGEMENT SCIENCE

Correction: Emergence of Azole-Resistant Aspergillus fumigatus Strains due to Agricultural Azole Use Creates an Increasing Threat to Human Health

(2013) Anuradha Chowdhary et al.   PLoS Pathogens

Triazole Fungicides Can Induce Cross-Resistance to Medical Triazoles in Aspergillus fumigatus

(2012) Eveline Snelders et al.   PLoS One

Clonal Expansion and Emergence of Environmental Multiple-Triazole-Resistant Aspergillus fumigatus Strains Carrying the TR34/L98H Mutations in the cyp51A Gene in India

(2012) Anuradha Chowdhary et al.   PLoS One

The variant call format and VCFtools

(2011) P. Danecek et al.   BIOINFORMATICS

Control-FREEC: a tool for assessing copy number and allelic content using next-generation sequencing data

(2011) Valentina Boeva et al.   BIOINFORMATICS

Environmental Study of Azole-Resistant Aspergillus fumigatus and Other Aspergilli in Austria, Denmark, and Spain

(2010) K. L. Mortensen et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

(2010) Morgan N. Price et al.   PLoS One

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Azole resistance in Aspergillus fumigatus: a side-effect of environmental fungicide use?

(2009) Paul E Verweij et al.   LANCET INFECTIOUS DISEASES