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(2020) Tetsuo Kon et al.   CURRENT BIOLOGY

Differential expression of innate and adaptive immune genes in the survivors of three gibel carp gynogenetic clones after herpesvirus challenge

(2019) Wei-Jia Lu et al.   BMC GENOMICS

Eye Degeneration and Loss of otx5b Expression in the Cavefish Sinocyclocheilus tileihornes

(2019) Zushi Huang et al.   JOURNAL OF MOLECULAR EVOLUTION

Graph-based genome alignment and genotyping with HISAT2 and HISAT-genotype

(2019) Daehwan Kim et al.   NATURE BIOTECHNOLOGY

Genetic and epigenetic control of retinal development in zebrafish

(2019) Pawat Seritrakul et al.   CURRENT OPINION IN NEUROBIOLOGY

RANKL, Ephrin-Eph and Wnt10b are key intercellular communication molecules regulating bone remodeling in autologous transplanted goldfish scales

(2018) Yuya Tazaki et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY A-MOLECULAR & INTEGRATIVE PHYSIOLOGY

Peroxisome Proliferated Activated Receptors (PPARs): Opportunities and Challenges for Ocular Therapy

(2018) Prachi Khatol et al.   CRITICAL REVIEWS IN THERAPEUTIC DRUG CARRIER SYSTEMS

Differential interferon system gene expression profiles in susceptible and resistant gynogenetic clones of gibel carp challenged with herpesvirus Ca HV

(2018) Cheng-Yan Mou et al.   DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY

Conserved characteristics of ocular refractive development – Did the eye evolve once?

(2018) Jacob G. Sivak et al.   EXPERIMENTAL EYE RESEARCH

Why goldfish? Merits and challenges in employing goldfish as a model organism in comparative endocrinology research

(2018) Ayelén Melisa Blanco et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY

Adipogenesis in fish

(2018) Cristina Salmerón   JOURNAL OF EXPERIMENTAL BIOLOGY

The chimeric genes in the hybrid lineage of Carassius auratus cuvieri (♀)×Carassius auratus red var. (♂)

(2018) Qingfeng Liu et al.   Science China-Life Sciences

An epigenetic regulatory switch controlling temperature-dependent sex determination in vertebrates

(2018) Xi-Yin Li et al.   Science China-Life Sciences

Goldfish: An old and new model system to study vertebrate development, evolution, and human disease

(2018) Yoshihiro Omori et al.   JOURNAL OF BIOCHEMISTRY

Helicobacter pylori and extragastric diseases: A review

(2018) Antonietta Gerarda Gravina et al.   WORLD JOURNAL OF GASTROENTEROLOGY

Physiological and pathological roles of FATP-mediated lipid droplets in Drosophila and mice retina

(2018) Daan M. Van Den Brink et al.   PLoS Genetics

Diverse and variable sex determination mechanisms in vertebrates

(2018) Xi-Yin Li et al.   Science China-Life Sciences

GABAergic Neurons and Their Modulatory Effects on GnRH3 in Zebrafish

(2017) Yanlong Song et al.   ENDOCRINOLOGY

Divergent Expression Patterns and Function Implications of Four nanos Genes in a Hermaphroditic Fish, Epinephelus coioides

(2017) Zhi-Hui Sun et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Signaling and Gene Regulatory Networks in Mammalian Lens Development

(2017) Ales Cvekl et al.   TRENDS IN GENETICS

Genetic Dissection of Dual Roles for the Transcription Factor six7 in Photoreceptor Development and Patterning in Zebrafish

(2016) Mailin Sotolongo-Lopez et al.   PLoS Genetics

Goldfish morphology as a model for evolutionary developmental biology

(2016) Kinya G. Ota et al.   Wiley Interdisciplinary Reviews-Developmental Biology

Effects of nutritional status on plasma leptin levels and in vitro regulation of adipocyte leptin expression and secretion in rainbow trout

(2015) Cristina Salmerón et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY

GABAergic neurotransmission and retinal ganglion cell function

(2015) E. Popova   JOURNAL OF COMPARATIVE PHYSIOLOGY A-NEUROETHOLOGY SENSORY NEURAL AND BEHAVIORAL PHYSIOLOGY

StringTie enables improved reconstruction of a transcriptome from RNA-seq reads

(2015) Mihaela Pertea et al.   NATURE BIOTECHNOLOGY

Homeobox transcription factor Six7 governs expression of green opsin genes in zebrafish

(2015) Yohey Ogawa et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Helicobacter pylori Infection and Eye Diseases

(2015) Sergio Claudio Saccà et al.   MEDICINE

Fatty Acid-Binding Protein E-FABP Restricts Tumor Growth by Promoting IFN-  Responses in Tumor-Associated Macrophages

(2014) Y. Zhang et al.   CANCER RESEARCH

Fast and sensitive protein alignment using DIAMOND

(2014) Benjamin Buchfink et al.   NATURE METHODS

The origin of the bifurcated axial skeletal system in the twin-tail goldfish

(2014) Gembu Abe et al.   Nature Communications

Imaging of neutral lipids by oil red O for analyzing the metabolic status in health and disease

(2013) Annika Mehlem et al.   Nature Protocols

New insights into the classification and nomenclature of cortical GABAergic interneurons

(2013) Javier DeFelipe et al.   NATURE REVIEWS NEUROSCIENCE

Origin of Chinese Goldfish and Sequential Loss of Genetic Diversity Accompanies New Breeds

(2013) Shu-Yan Wang et al.   PLoS One

Genome-wide microarray comparison reveals downstream genes of Pax6 in the developing mouse cerebellum

(2012) Thomas J. Ha et al.   EUROPEAN JOURNAL OF NEUROSCIENCE

Neuronal circuitry mechanism regulating adult quiescent neural stem-cell fate decision

(2012) Juan Song et al.   NATURE

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

Essential Role of ELOVL4 Protein in Very Long Chain Fatty Acid Synthesis and Retinal Function

(2011) Richard Harkewicz et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Blindness in dogs with pituitary dependent hyperadrenocorticism: Relationship with glucose, cortisol and triglyceride concentration and with ophthalmic blood flow

(2011) M.F. Cabrera Blatter et al.   RESEARCH IN VETERINARY SCIENCE

Phototransduction and the Evolution of Photoreceptors

(2010) Gordon L. Fain et al.   CURRENT BIOLOGY

Graves' Ophthalmopathy

(2010) Rebecca S. Bahn   NEW ENGLAND JOURNAL OF MEDICINE

Genetic basis and breeding application of clonal diversity and dual reproduction modes in polyploid Carassius auratus gibelio

(2010) JianFang Gui et al.   Science China-Life Sciences

DEGseq: an R package for identifying differentially expressed genes from RNA-seq data

(2009) Likun Wang et al.   BIOINFORMATICS

Discrete localization of various fatty-acid-binding proteins in various cell populations of mouse retina

(2009) Sachiko Saino-Saito et al.   CELL AND TISSUE RESEARCH

Comparison of Retinal Degeneration in the Normal Goldfish and the Megalophthalmic Black Moor Goldfish after Optic Nerve Transection and Lens Extraction

(2009) Xi Ying et al.   INTERNATIONAL JOURNAL OF NEUROSCIENCE

The structure and possible functions of the milkfishChanos chanosadipose eyelid

(2009) C.-H. Chang et al.   JOURNAL OF FISH BIOLOGY

Evolution of opsins and phototransduction

(2009) Y. Shichida et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Morphogenesis in the retina of a slow-developing teleost: Emergence of the GABAergic system in relation to cell proliferation and differentiation

(2008) Eva Candal et al.   BRAIN RESEARCH

The goldfish (Carassius auratus) as a model for neuroendocrine signaling

(2008) Jason T. Popesku et al.   MOLECULAR AND CELLULAR ENDOCRINOLOGY

Changes of phospho-growth-associated protein 43 (phospho-GAP43) in the zebrafish retina after optic nerve injury: A long-term observation

(2008) Manabu Kaneda et al.   NEUROSCIENCE RESEARCH

Ectopic Six3 expression in the dragon eye goldfish

(2007) Dong-Mei Ma et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY B-BIOCHEMISTRY & MOLECULAR BIOLOGY