Antisense RNA asPcrL regulates expression of photosynthesis genes in Rhodobacter sphaeroides by promoting RNase III-dependent turn-over of puf mRNA

Identification of protein-protein and ribonucleoprotein complexes containing Hfq

(2019) Joël Caillet et al.   Scientific Reports

New aspects of RNA-based regulation by Hfq and its partner sRNAs

(2018) Kumari Kavita et al.   CURRENT OPINION IN MICROBIOLOGY

PcrX, an sRNA derived from the 3′- UTR of the Rhodobacter sphaeroides puf operon modulates expression of puf genes encoding proteins of the bacterial photosynthetic apparatus

(2018) Katrin Eisenhardt et al.   MOLECULAR MICROBIOLOGY

Bacillus subtilis Type I antitoxin SR6 Promotes Degradation of Toxin yonT mRNA and Is Required to Prevent Toxic yoyJ Overexpression

(2018) Celine Reif et al.   Toxins

Hfq chaperone brings speed dating to bacterial sRNA

(2018) Andrew Santiago-Frangos et al.   Wiley Interdisciplinary Reviews-RNA

An RpoHI-Dependent Response Promotes Outgrowth after Extended Stationary Phase in the Alphaproteobacterium Rhodobacter sphaeroides

(2017) B. Remes et al.   JOURNAL OF BACTERIOLOGY

PufQ regulates porphyrin flux at the haem/bacteriochlorophyll branchpoint of tetrapyrrole biosynthesis via interactions with ferrochelatase

(2017) Jack W. Chidgey et al.   MOLECULAR MICROBIOLOGY

A Unique cis -Encoded Small Noncoding RNA Is Regulating Legionella pneumophila Hfq Expression in a Life Cycle-Dependent Manner

(2017) Giulia Oliva et al.   mBio

Natural antisense RNAs as mRNA regulatory elements in bacteria: a review on function and applications

(2016) Fatemeh Saberi et al.   CELLULAR & MOLECULAR BIOLOGY LETTERS

Hfq: the flexible RNA matchmaker

(2016) Taylor B Updegrove et al.   CURRENT OPINION IN MICROBIOLOGY

Regulation of a polyamine transporter by the conserved 3′ UTR-derived sRNA SorX confers resistance to singlet oxygen and organic hydroperoxides inRhodobacter sphaeroides

(2016) Tao Peng et al.   RNA Biology

Characteristics of Pos19 – A Small Coding RNA in the Oxidative Stress Response of Rhodobacter sphaeroides

(2016) Katrin M. H. Müller et al.   PLoS One

The Conserved Dcw Gene Cluster of R. sphaeroides Is Preceded by an Uncommonly Extended 5’ Leader Featuring the sRNA UpsM

(2016) Lennart Weber et al.   PLoS One

Alternative Hfq-sRNA interaction modes dictate alternative mRNA recognition

(2015) D. J. Schu et al.   EMBO JOURNAL

A Cluster of Four Homologous Small RNAs Modulates C1Metabolism and the Pyruvate Dehydrogenase Complex in Rhodobacter sphaeroides under Various Stress Conditions

(2015) Fabian Billenkamp et al.   JOURNAL OF BACTERIOLOGY

Distinct Requirements for 5′-Monophosphate-assisted RNA Cleavage byEscherichia coliRNase E and RNase G

(2015) Jamie Richards et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

An Integrated Approach to Reconstructing Genome-Scale Transcriptional Regulatory Networks

(2015) Saheed Imam et al.   PLoS Computational Biology

Role of oxygen and the OxyR protein in the response to iron limitation in Rhodobacter sphaeroides

(2014) Bernhard Remes et al.   BMC GENOMICS

The double-stranded transcriptome of Escherichia coli

(2014) M. Lybecker et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

RNase J is required for processing of a small number of RNAs inRhodobacter sphaeroides

(2014) Tom Rische-Grahl et al.   RNA Biology

A mixed incoherent feed-forward loop contributes to the regulation of bacterial photosynthesis genes

(2013) Nils N. Mank et al.   RNA Biology

Hfq restructures RNA-IN and RNA-OUT and facilitates antisense pairing in the Tn10/IS10 system

(2013) J. A. Ross et al.   RNA

Acting antisense: plasmid- and chromosome-encoded sRNAs from Gram-positive bacteria

(2012) Sabine Brantl   Future Microbiology

Regulation of bacterial photosynthesis genes by the small noncoding RNA PcrZ

(2012) N. N. Mank et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

cis-Antisense RNA, Another Level of Gene Regulation in Bacteria

(2011) J. Georg et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Contribution of Hfq to photooxidative stress resistance and global regulation in Rhodobacter sphaeroides

(2011) Bork A. Berghoff et al.   MOLECULAR MICROBIOLOGY

Hfq and its constellation of RNA

(2011) Jörg Vogel et al.   NATURE REVIEWS MICROBIOLOGY

Overlapping Alternative Sigma Factor Regulons in the Response to Singlet Oxygen in Rhodobacter sphaeroides

(2010) A. M. Nuss et al.   JOURNAL OF BACTERIOLOGY

Hfq binding at RhlB-recognition region of RNase E is crucial for the rapid degradation of target mRNAs mediated by sRNAs in Escherichia coli

(2010) Yoshiki Ikeda et al.   MOLECULAR MICROBIOLOGY

Regulation of the small regulatory RNA MicA by ribonuclease III: a target-dependent pathway

(2010) Sandra C. Viegas et al.   NUCLEIC ACIDS RESEARCH

Photooxidative stress-induced and abundant small RNAs in Rhodobacter sphaeroides

(2009) Bork A. Berghoff et al.   MOLECULAR MICROBIOLOGY

Role of the Global Transcriptional Regulator PrrA in Rhodobacter sphaeroides 2.4.1: Combined Transcriptome and Proteome Analysis

(2008) J. M. Eraso et al.   JOURNAL OF BACTERIOLOGY

The Use of Chromatin Immunoprecipitation to Define PpsR Binding Activity in Rhodobacter sphaeroides 2.4.1

(2008) P. Bruscella et al.   JOURNAL OF BACTERIOLOGY

The Vienna RNA Websuite

(2008) A. R. Gruber et al.   NUCLEIC ACIDS RESEARCH