Mitochondrial genomes of two eucotylids as the first representatives from the superfamily Microphalloidea (Trematoda) and phylogenetic implications

Molecular phylogenetics and mitogenomics of three avian dicrocoeliids (Digenea: Dicrocoeliidae) and comparison with mammalian dicrocoeliids

(2020) Suleman et al.   Parasites & Vectors

Comparative mitogenomics of the zoonotic parasite Echinostoma revolutum resolves taxonomic relationships within the ‘E. revolutum’ species group and the Echinostomata (Platyhelminthes: Digenea)

(2020) Thanh Hoa Le et al.   PARASITOLOGY

Mitochondrial and nuclear ribosomal DNA dataset suggests that Hepatiarius sudarikovi Feizullaev, 1961 is a member of the genus Opisthorchis Blanchard, 1895 (Digenea: Opisthorchiidae)

(2019) Suleman et al.   PARASITOLOGY RESEARCH

Testing the higher-level phylogenetic classification of Digenea (Platyhelminthes, Trematoda) based on nuclear rDNA sequences before entering the age of the ‘next-generation’ Tree of Life

(2019) G. Pérez-Ponce de León et al.   JOURNAL OF HELMINTHOLOGY

Long-read sequencing reveals a 4.4 kb tandem repeat region in the mitogenome of Echinococcus granulosus (sensu stricto) genotype G1

(2019) Liina Kinkar et al.   Parasites & Vectors

Characterization of the complete mitochondrial genome of Plagiorchis maculosus (Digenea, Plagiorchiidae), Representative of a taxonomically complex digenean family

(2019) Suleman et al.   PARASITOLOGY INTERNATIONAL

PhyloSuite: An integrated and scalable desktop platform for streamlined molecular sequence data management and evolutionary phylogenetics studies

(2019) Dong Zhang et al.   Molecular Ecology Resources

Pathological and molecular studies of the renal trematode Paratanaisia bragai in Indian peafowls (Pavo cristatus)

(2018) M. Asok Kumar et al.   ACTA PARASITOLOGICA

MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms

(2018) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Comparative mitogenomics supports synonymy of the genera Ligula and Digramma (Cestoda: Diphyllobothriidae)

(2018) Wen X. Li et al.   Parasites & Vectors

Occurrence of Paratanaisia spp. Freitas, 1951 in a domiciled cockatiel (Nymphicus hollandicus, Psittaciformes: Cacatuidae)

(2018) Mariele De Santi et al.   REVISTA BRASILEIRA DE PARASITOLOGIA VETERINARIA

Three new Diplozoidae mitogenomes expose unusual compositional biases within the Monogenea class: implications for phylogenetic studies

(2018) Dong Zhang et al.   BMC EVOLUTIONARY BIOLOGY

Validity of the Diplostomoidea and Diplostomida (Digenea, Platyhelminthes) upheld in phylogenomic analysis

(2018) Sean A. Locke et al.   INTERNATIONAL JOURNAL FOR PARASITOLOGY

Mitochondrial genomes of two diplectanids (Platyhelminthes: Monogenea) expose paraphyly of the order Dactylogyridea and extensive tRNA gene rearrangements

(2018) Dong Zhang et al.   Parasites & Vectors

Whole-genome sequence of the oriental lung fluke Paragonimus westermani

(2018) Harald Oey et al.   GigaScience

ModelFinder: fast model selection for accurate phylogenetic estimates

(2017) Subha Kalyaanamoorthy et al.   NATURE METHODS

Fasciolopsis buski (Digenea: Fasciolidae) from China and India may represent distinct taxa based on mitochondrial and nuclear ribosomal DNA sequences

(2017) Jun Ma et al.   Parasites & Vectors

The mitochondrial genomes of the acoelomorph worms Paratomella rubra, Isodiametra pulchra and Archaphanostoma ylvae

(2017) Helen E. Robertson et al.   Scientific Reports

A complete mitochondrial genome from Echinochasmus japonicus supports the elevation of Echinochasminae Odhner, 1910 to family rank (Trematoda: Platyhelminthes)

(2016) Thanh Hoa Le et al.   INFECTION GENETICS AND EVOLUTION

Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees

(2016) Ivica Letunic et al.   NUCLEIC ACIDS RESEARCH

The mitochondrial genome and ribosomal operon of Brachycladium goliath (Digenea: Brachycladiidae) recovered from a stranded minke whale

(2016) Andrew G. Briscoe et al.   PARASITOLOGY INTERNATIONAL

Trematodes from the Northern Lapwing, Vanellus vanellus (Charadriidae), from Central Germany

(2016) Juliane Hintzen et al.   PARASITOLOGY RESEARCH

Redescription of Tanaisia dubia (Digenea) from the northeast region of Argentina, with a key to Neotropical species of the genus, and a key to genera of Tanaisiinae

(2015) Lía I. Lunaschi et al.   Revista Mexicana de Biodiversidad

IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies

(2014) Lam-Tung Nguyen et al.   MOLECULAR BIOLOGY AND EVOLUTION

Dicrocoelium chinensis and Dicrocoelium dendriticum (Trematoda: Digenea) are distinct lancet fluke species based on mitochondrial and nuclear ribosomal DNA sequences

(2014) Guo-Hua Liu et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Complete mitochondrial genomes of the ‘intermediate form’ of Fasciola and Fasciola gigantica, and their comparison with F. hepatica

(2014) Guo-Hua Liu et al.   Parasites & Vectors

A large-scale molecular survey ofClinostomum(Digenea, Clinostomidae)

(2014) Sean A. Locke et al.   ZOOLOGICA SCRIPTA

The mitochondrial genome ofParagonimus westermani(Kerbert, 1878), the Indian isolate of the lung fluke representative of the family Paragonimidae (Trematoda)

(2014) Devendra K. Biswal et al.   PeerJ

Ultrafast Approximation for Phylogenetic Bootstrap

(2013) B. Q. Minh et al.   MOLECULAR BIOLOGY AND EVOLUTION

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

MITOS: Improved de novo metazoan mitochondrial genome annotation

(2012) Matthias Bernt et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

jModelTest 2: more models, new heuristics and parallel computing

(2012) Diego Darriba et al.   NATURE METHODS

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

The Complete Mitochondrial Genome ofDugesia japonica(Platyhelminthes; Order Tricladida)

(2012) Masato Sakai et al.   ZOOLOGICAL SCIENCE

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

(2009) P. Librado et al.   BIOINFORMATICS