Hydrogen–deuterium exchange reveals a dynamic DNA-binding map of replication protein A

Molecular architecture of the DNA-binding sites of the P-loop ATPases MipZ and ParA from Caulobacter crescentus

(2020) Laura Corrales-Guerrero et al.   NUCLEIC ACIDS RESEARCH

Dynamic elements of replication protein A at the crossroads of DNA replication, recombination, and repair

(2020) Colleen C. Caldwell et al.   CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY

Dynamics and selective remodeling of the DNA-binding domains of RPA

(2019) Nilisha Pokhrel et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Recommendations for performing, interpreting and reporting hydrogen deuterium exchange mass spectrometry (HDX-MS) experiments

(2019) Glenn R. Masson et al.   NATURE METHODS

A key interaction with RPA orients XPA in NER complexes

(2019) Agnieszka M Topolska-Woś et al.   NUCLEIC ACIDS RESEARCH

H/D exchange mass spectrometry and statistical coupling analysis reveal a role for allostery in a ferredoxin-dependent bifurcating transhydrogenase catalytic cycle

(2018) Luke Berry et al.   BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS

Mapping Conformational Dynamics to Individual Steps in the TEM-1 β-Lactamase Catalytic Mechanism

(2018) Ruth Knox et al.   JOURNAL OF MOLECULAR BIOLOGY

SWISS-MODEL: homology modelling of protein structures and complexes

(2018) Andrew Waterhouse et al.   NUCLEIC ACIDS RESEARCH

Dynamics of E. coli single stranded DNA binding (SSB) protein-DNA complexes

(2018) Edwin Antony et al.   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

A structural and dynamic model for the assembly of Replication Protein A on single-stranded DNA

(2018) Luke A. Yates et al.   Nature Communications

Monitoring Replication Protein A (RPA) dynamics in homologous recombination through site-specific incorporation of non-canonical amino acids

(2017) Nilisha Pokhrel et al.   NUCLEIC ACIDS RESEARCH

HDX reveals the conformational dynamics of DNA sequence specific VDR co-activator interactions

(2017) Jie Zheng et al.   Nature Communications

DNA Interactions Probed by Hydrogen-Deuterium Exchange (HDX) Fourier Transform Ion Cyclotron Resonance Mass Spectrometry Confirm External Binding Sites on the Minichromosomal Maintenance (MCM) Helicase

(2016) Brian W. Graham et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Dynamic binding of replication protein a is required for DNA repair

(2016) Ran Chen et al.   NUCLEIC ACIDS RESEARCH

Characteristics and concepts of dynamic hub proteins in DNA processing machinery from studies of RPA

(2015) Norie Sugitani et al.   PROGRESS IN BIOPHYSICS & MOLECULAR BIOLOGY

Functional Dynamics in Replication Protein A DNA Binding and Protein Recruitment Domains

(2015) Chris A. Brosey et al.   STRUCTURE

Dna2 nuclease-helicase structure, mechanism and regulation by Rpa

(2015) Chun Zhou et al.   eLife

RPA-coated single-stranded DNA as a platform for post-translational modifications in the DNA damage response

(2014) Alexandre Maréchal et al.   CELL RESEARCH

Diffusion of Human Replication Protein A along Single-Stranded DNA

(2014) Binh Nguyen et al.   JOURNAL OF MOLECULAR BIOLOGY

Concentration-Dependent Exchange of Replication Protein A on Single-Stranded DNA Revealed by Single-Molecule Imaging

(2014) Bryan Gibb et al.   PLoS One

A new structural framework for integrating replication protein A into DNA processing machinery

(2013) Chris A. Brosey et al.   NUCLEIC ACIDS RESEARCH

Structure and conformational change of a replication protein A heterotrimer bound to ssDNA

(2012) J. Fan et al.   GENES & DEVELOPMENT

Epitope Mapping of a 95 kDa Antigen in Complex with Antibody by Solution-Phase Amide Backbone Hydrogen/Deuterium Exchange Monitored by Fourier Transform Ion Cyclotron Resonance Mass Spectrometry

(2011) Qian Zhang et al.   ANALYTICAL CHEMISTRY

Structural Dynamics and Single-Stranded DNA Binding Activity of the Three N-Terminal Domains of the Large Subunit of Replication Protein A from Small Angle X-ray Scattering

(2010) Dalyir I. Pretto et al.   BIOCHEMISTRY

Identification of proteins that may directly interact with human RPA

(2010) Ryou Nakaya et al.   JOURNAL OF BIOCHEMISTRY

Evidence for direct contact between the RPA3 subunit of the human replication protein A and single-stranded DNA

(2008) T. R. Salas et al.   NUCLEIC ACIDS RESEARCH