Machine learning reveals bilateral distribution of somatic L1 insertions in human neurons and glia
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Title
Machine learning reveals bilateral distribution of somatic L1 insertions in human neurons and glia
Authors
Keywords
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Journal
NATURE NEUROSCIENCE
Volume -, Issue -, Pages -
Publisher
Springer Science and Business Media LLC
Online
2021-01-12
DOI
10.1038/s41593-020-00767-4
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Note: Only part of the references are listed.- Accurate detection of mosaic variants in sequencing data without matched controls
- (2020) Yanmei Dou et al. NATURE BIOTECHNOLOGY
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- (2019) Weichen Zhou et al. NUCLEIC ACIDS RESEARCH
- Whole-genome sequencing reveals principles of brain retrotransposition in neurodevelopmental disorders
- (2018) Jasmine Jacob-Hirsch et al. CELL RESEARCH
- A unique role for DNA (hydroxy)methylation in epigenetic regulation of human inhibitory neurons
- (2018) Alexey Kozlenkov et al. Science Advances
- Heritable L1 retrotransposition in the mouse primordial germline and early embryo
- (2017) Sandra R. Richardson et al. GENOME RESEARCH
- Different mutational rates and mechanisms in human cells at pregastrulation and neurogenesis
- (2017) Taejeong Bae et al. SCIENCE
- Intersection of diverse neuronal genomes and neuropsychiatric disease: The Brain Somatic Mosaicism Network
- (2017) Michael J. McConnell et al. SCIENCE
- The Role of Somatic L1 Retrotransposition in Human Cancers
- (2017) Emma Scott et al. Viruses-Basel
- A reference data set of 5.4 million phased human variants validated by genetic inheritance from sequencing a three-generation 17-member pedigree
- (2016) Michael A. Eberle et al. GENOME RESEARCH
- Analysis of protein-coding genetic variation in 60,706 humans
- (2016) Monkol Lek et al. NATURE
- L1-associated genomic regions are deleted in somatic cells of the healthy human brain
- (2016) Jennifer A Erwin et al. NATURE NEUROSCIENCE
- Purification and Characterization of Progenitor and Mature Human Astrocytes Reveals Transcriptional and Functional Differences with Mouse
- (2016) Ye Zhang et al. NEURON
- Ensembl regulation resources
- (2016) Daniel R. Zerbino et al. Database-The Journal of Biological Databases and Curation
- Resolving rates of mutation in the brain using single-neuron genomics
- (2016) Gilad D Evrony et al. eLife
- Roles for retrotransposon insertions in human disease
- (2016) Dustin C. Hancks et al. Mobile DNA
- Ubiquitous L1 Mosaicism in Hippocampal Neurons
- (2015) Kyle R. Upton et al. CELL
- Programmed Cell Death in Neurodevelopment
- (2015) Yoshifumi Yamaguchi et al. DEVELOPMENTAL CELL
- An integrated map of structural variation in 2,504 human genomes
- (2015) Peter H. Sudmant et al. NATURE
- Brain somatic mutations in MTOR cause focal cortical dysplasia type II leading to intractable epilepsy
- (2015) Jae Seok Lim et al. NATURE MEDICINE
- Cell Lineage Analysis in Human Brain Using Endogenous Retroelements
- (2015) Gilad D. Evrony et al. NEURON
- The Ensembl Regulatory Build
- (2015) Daniel R Zerbino et al. GENOME BIOLOGY
- Regularization Paths for Generalized Linear Models via Coordinate Descent
- (2015) Jerome Friedman et al. Journal of Statistical Software
- A syndrome of congenital microcephaly, intellectual disability and dysmorphism with a homozygous mutation in FRMD4A
- (2014) Dina Fine et al. EUROPEAN JOURNAL OF HUMAN GENETICS
- Magnetic resonance spectroscopy and tissue protein concentrations together suggest lower glutamate signaling in dentate gyrus in schizophrenia
- (2014) A D Stan et al. MOLECULAR PSYCHIATRY
- Analysis of copy number variations at 15 schizophrenia-associated loci
- (2013) Elliott Rees et al. BRITISH JOURNAL OF PSYCHIATRY
- The Role of Transposable Elements in Health and Diseases of the Central Nervous System
- (2013) M. T. Reilly et al. JOURNAL OF NEUROSCIENCE
- Sturge–Weber Syndrome and Port-Wine Stains Caused by Somatic Mutation in GNAQ
- (2013) Matthew D. Shirley et al. NEW ENGLAND JOURNAL OF MEDICINE
- RetroSeq: transposable element discovery from next-generation sequencing data
- (2012) Thomas M. Keane et al. BIOINFORMATICS
- Single-Neuron Sequencing Analysis of L1 Retrotransposition and Somatic Mutation in the Human Brain
- (2012) Gilad D. Evrony et al. CELL
- Somatic Activation of AKT3 Causes Hemispheric Developmental Brain Malformations
- (2012) Annapurna Poduri et al. NEURON
- pROC: an open-source package for R and S+ to analyze and compare ROC curves
- (2011) Xavier Robin et al. BMC BIOINFORMATICS
- Somatic retrotransposition alters the genetic landscape of the human brain
- (2011) J. Kenneth Baillie et al. NATURE
- Integrative genomics viewer
- (2011) James T Robinson et al. NATURE BIOTECHNOLOGY
- Modeling sample variables with an Experimental Factor Ontology
- (2010) James Malone et al. BIOINFORMATICS
- Fast and accurate short read alignment with Burrows-Wheeler transform
- (2009) H. Li et al. BIOINFORMATICS
- L1 retrotransposition in human neural progenitor cells
- (2009) Nicole G. Coufal et al. NATURE
- FRMD4A regulates epithelial polarity by connecting Arf6 activation with the PAR complex
- (2009) J. Ikenouchi et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Neuronal Nuclei Isolation from Human Postmortem Brain Tissue
- (2008) Anouch Matevossian et al. Jove-Journal of Visualized Experiments
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