A network of transcriptional repressors modulates auxin responses

High levels of auxin signalling define the stem-cell organizer of the vascular cambium

(2019) Ondřej Smetana et al.   NATURE

Changes in chromatin accessibility between Arabidopsis stem cells and mesophyll cells illuminate cell type-specific transcription factor networks

(2018) Paja Sijacic et al.   PLANT JOURNAL

Root branching toward water involves posttranslational modification of transcription factor ARF7

(2018) Beatriz Orosa-Puente et al.   SCIENCE

JASPAR 2018: update of the open-access database of transcription factor binding profiles and its web framework

(2017) Aziz Khan et al.   NUCLEIC ACIDS RESEARCH

Profiling of Accessible Chromatin Regions across Multiple Plant Species and Cell Types Reveals Common Gene Regulatory Principles and New Control Modules

(2017) Kelsey A. Maher et al.   PLANT CELL

Auxin Signaling

(2017) Ottoline Leyser   PLANT PHYSIOLOGY

Morphogen interpretation: concentration, time, competence, and signaling dynamics

(2017) Andreas Sagner et al.   Wiley Interdisciplinary Reviews-Developmental Biology

Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape

(2016) Ronan C. O’Malley et al.   CELL

The auxin response factor MONOPTEROS controls meristem function and organogenesis in both the shoot and root through the direct regulation ofPINgenes

(2016) Naden T. Krogan et al.   NEW PHYTOLOGIST

MultiSite Gateway-Compatible Cell Type-Specific Gene-Inducible System for Plants

(2015) Riccardo Siligato et al.   PLANT PHYSIOLOGY

Genome expansion of Arabis alpina linked with retrotransposition and reduced symmetric DNA methylation

(2015) Eva-Maria Willing et al.   Nature Plants

Determination and Inference of Eukaryotic Transcription Factor Sequence Specificity

(2014) Matthew T. Weirauch et al.   CELL

A high-resolution gene expression map of the Arabidopsis shoot meristem stem cell niche

(2014) R. K. Yadav et al.   DEVELOPMENT

Polycomb-Mediated Gene Silencing in Arabidopsis thaliana

(2014) Dong-Hwan Kim et al.   MOLECULES AND CELLS

Mapping and Dynamics of Regulatory DNA and Transcription Factor Networks in A. thaliana

(2014) Alessandra M. Sullivan et al.   Cell Reports

A secreted peptide acts on BIN2-mediated phosphorylation of ARFs to potentiate auxin response during lateral root development

(2013) Hyunwoo Cho et al.   NATURE CELL BIOLOGY

Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration

(2012) H. Thorvaldsdottir et al.   BRIEFINGS IN BIOINFORMATICS

Evolution of the ARF Gene Family in Land Plants: Old Domains, New Tricks

(2012) Cédric Finet et al.   MOLECULAR BIOLOGY AND EVOLUTION

Integrative epigenomic mapping defines four main chromatin states in Arabidopsis

(2011) François Roudier et al.   EMBO JOURNAL

The auxin signalling network translates dynamic input into robust patterning at the shoot apex

(2011) T. Vernoux et al.   Molecular Systems Biology

Integrative genomics viewer

(2011) James T Robinson et al.   NATURE BIOTECHNOLOGY

Enhanced Y1H assays for Arabidopsis

(2011) Allison Gaudinier et al.   NATURE METHODS

Transcriptional Regulation ofArabidopsis LEAFY COTYLEDON2InvolvesRLE, acis-Element That Regulates Trimethylation of Histone H3 at Lysine-27

(2011) Nathalie Berger et al.   PLANT CELL

A cellular expression map of the Arabidopsis AUXIN RESPONSE FACTOR gene family

(2011) Eike H. Rademacher et al.   PLANT JOURNAL

Dynamic Regulation of H3K27 Trimethylation during Arabidopsis Differentiation

(2011) Marcel Lafos et al.   PLoS Genetics

A Simple Method for Gene Expression and Chromatin Profiling of Individual Cell Types within a Tissue

(2010) Roger B. Deal et al.   DEVELOPMENTAL CELL

Hormonal control of the shoot stem-cell niche

(2010) Zhong Zhao et al.   NATURE

MONOPTEROS controls embryonic root initiation by regulating a mobile transcription factor

(2010) Alexandra Schlereth et al.   NATURE

Auxin transport routes in plant development

(2009) J. Petrasek et al.   DEVELOPMENT

Phenotypic Plasticity of Adventitious Rooting in Arabidopsis Is Controlled by Complex Regulation of AUXIN RESPONSE FACTOR Transcripts and MicroRNA Abundance

(2009) L. Gutierrez et al.   PLANT CELL

Gene expression map of the Arabidopsis shoot apical meristem stem cell niche

(2009) R. K. Yadav et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Use of the viral 2A peptide for bicistronic expression in transgenic mice

(2008) Georgios Trichas et al.   BMC BIOLOGY

Comprehensive Transcriptome Analysis of Auxin Responses in Arabidopsis

(2008) Ivan A. Paponov et al.   Molecular Plant

The AtGenExpress hormone and chemical treatment data set: experimental design, data evaluation, model data analysis and data access

(2008) Hideki Goda et al.   PLANT JOURNAL

Cell-specific nitrogen responses mediate developmental plasticity

(2008) M. L. Gifford et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA