Transformation of Pathology Reports Into the Common Data Model With Oncology Module: Use Case for Colon Cancer

Implementation of a Cohort Retrieval System for Clinical Data Repositories Using the Observational Medical Outcomes Partnership Common Data Model: Proof-of-Concept System Validation

(2020) Sijia Liu et al.   JMIR Medical Informatics

Developing a portable natural language processing based phenotyping system

(2019) Himanshu Sharma et al.   BMC Medical Informatics and Decision Making

Global cancer statistics 2018: GLOBOCAN estimates of incidence and mortality worldwide for 36 cancers in 185 countries

(2018) Freddie Bray et al.   CA-A CANCER JOURNAL FOR CLINICIANS

RysannMD: A biomedical semantic annotator balancing speed and accuracy

(2017) John Cuzzola et al.   JOURNAL OF BIOMEDICAL INFORMATICS

NOBLE – Flexible concept recognition for large-scale biomedical natural language processing

(2016) Eugene Tseytlin et al.   BMC BIOINFORMATICS

Evaluating common data models for use with a longitudinal community registry

(2016) Maryam Garza et al.   JOURNAL OF BIOMEDICAL INFORMATICS

Creating a Common Data Model for Comparative Effectiveness with the Observational Medical Outcomes Partnership

(2015) F.S. Resnic et al.   Applied Clinical Informatics

An overview of MetaMap: historical perspective and recent advances

(2014) Alan R Aronson et al.   JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION

Long-term results of treatment with bosentan in adult Eisenmenger’s syndrome patients with Down’s syndrome related to congenital heart disease

(2013) Roberto Crepaz et al.   BMC Cardiovascular Disorders

The Electronic Medical Records and Genomics (eMERGE) Network: past, present and future

(2013) Omri Gottesman et al.   GENETICS IN MEDICINE

Concept annotation in the CRAFT corpus

(2012) Michael Bada et al.   BMC BIOINFORMATICS

Validation of a common data model for active safety surveillance research

(2011) J Marc Overhage et al.   JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION

Improving textual medication extraction using combined conditional random fields and rule-based systems

(2010) Domonkos Tikk et al.   JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION

Mayo clinical Text Analysis and Knowledge Extraction System (cTAKES): architecture, component evaluation and applications

(2010) Guergana K Savova et al.   JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION