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H3K4me3 Interactions with TAF3 Regulate Preinitiation Complex Assembly and Selective Gene Activation

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Comprehensive Genome-Wide Survey, Genomic Constitution and Expression Profiling of the NAC Transcription Factor Family in Foxtail Millet (Setaria italica L.)

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(2012)   NATURE

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(2012) Robert E. Thurman et al.   NATURE

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(2012) Mark B. Gerstein et al.   NATURE

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Integrative analysis of chromatin states in Arabidopsis identified potential regulatory mechanisms for natural antisense transcript production

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Genome-wide profiling of histone H3K4-tri-methylation and gene expression in rice under drought stress

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(2011) Qunhua Li et al.   Annals of Applied Statistics

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(2011) M. Ha et al.   GENOME RESEARCH

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(2011) Mazhar Adli et al.   Nature Protocols

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Dissection of the Transcriptional Program Regulating Secondary Wall Biosynthesis during Wood Formation in Poplar

(2011) R. Zhong et al.   PLANT PHYSIOLOGY

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(2010) Chunyan Liu et al.   Annual Review of Plant Biology

Nucleolar RNPs: from genes to functional snoRNAs in plants

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Dynamic Changes in Genome-Wide Histone H3 Lysine 4 Methylation Patterns in Response to Dehydration Stress in Arabidopsis thaliana

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Systematic analysis of gene expression level with tissue-specificity, function and protein subcellular localization in human transcriptome

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Genome-wide chromatin maps derived from limited numbers of hematopoietic progenitors

(2010) Mazhar Adli et al.   NATURE METHODS

Chromatin immunoprecipitation (ChIP) of plant transcription factors followed by sequencing (ChIP-SEQ) or hybridization to whole genome arrays (ChIP-CHIP)

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Charting histone modifications and the functional organization of mammalian genomes

(2010) Vicky W. Zhou et al.   NATURE REVIEWS GENETICS

Genome-wide profiling of histone H3 lysine 9 acetylation and dimethylation in Arabidopsis reveals correlation between multiple histone marks and gene expression

(2010) Junli Zhou et al.   PLANT MOLECULAR BIOLOGY

Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences

(2010) Jeremy Goecks et al.   GENOME BIOLOGY

In plants, expression breadth and expression level distinctly and non-linearly correlate with gene structure

(2009) Hangxing Yang   Biology Direct

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Genome-wide analysis of mono-, di- and trimethylation of histone H3 lysine 4 in Arabidopsis thaliana

(2009) Xiaoyu Zhang et al.   GENOME BIOLOGY

Dynamic and stable histone H3 methylation patterns at the Arabidopsis FLC and AP1 loci

(2008) Abdelaty Saleh et al.   GENE

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(2008) Peter V Kharchenko et al.   NATURE BIOTECHNOLOGY

The Highly Similar Arabidopsis Homologs of Trithorax ATX1 and ATX2 Encode Proteins with Divergent Biochemical Functions

(2008) A. Saleh et al.   PLANT CELL

ARABIDOPSIS TRITHORAX1 Dynamically Regulates FLOWERING LOCUS C Activation via Histone 3 Lysine 4 Trimethylation

(2008) S. Pien et al.   PLANT CELL

High-Resolution Mapping of Epigenetic Modifications of the Rice Genome Uncovers Interplay between DNA Methylation, Histone Methylation, and Gene Expression

(2008) X. Li et al.   PLANT CELL

A unique program for cell death in xylem fibers ofPopulusstem

(2008) Charleen L. Courtois-Moreau et al.   PLANT JOURNAL

Structural Insight into the Recognition of the H3K4me3 Mark by the TFIID Subunit TAF3

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Model-based Analysis of ChIP-Seq (MACS)

(2008) Yong Zhang et al.   GENOME BIOLOGY