Soil organic matter, nitrogen and pH driven change in bacterial community following forest conversion

Structural and functional differentiation of bacterial communities in post-coal mining reclamation soils of South Africa: bioindicators of soil ecosystem restoration

(2020) Obinna T. Ezeokoli et al.   Scientific Reports

Diversity of sediment bacterial communities in the South Eastern Arabian Sea

(2020) P.V. Vipindas et al.   Regional Studies in Marine Science

Differentiating Microbial Taxonomic and Functional Responses to Physical Disturbance in Bulk and Rhizosphere Soils

(2020) Hang Wang et al.   LAND DEGRADATION & DEVELOPMENT

Do tree plantations or cultivated fields have the same ability to maintain soil quality as natural forests?

(2020) Mehrdad Zarafshar et al.   APPLIED SOIL ECOLOGY

Groundwater Elusimicrobia are metabolically diverse compared to gut microbiome Elusimicrobia and some have a novel nitrogenase paralog

(2020) Raphaël Méheust et al.   ISME Journal

Microbial C:N:P stoichiometry and turnover depend on nutrients availability in soil: A 14C, 15N and 33P triple labelling study

(2019) Jie Chen et al.   SOIL BIOLOGY & BIOCHEMISTRY

Soil microbial community and activity in a tropical integrated crop-livestock system

(2019) Marcos V.M. Sarto et al.   APPLIED SOIL ECOLOGY

Long‐term nitrogen addition modifies microbial composition and functions for slow carbon cycling and increased sequestration in tropical forest soil

(2019) Jing Tian et al.   GLOBAL CHANGE BIOLOGY

Effects of tree species and soil properties on the composition and diversity of the soil bacterial community following afforestation

(2018) Jinliang Liu et al.   FOREST ECOLOGY AND MANAGEMENT

Carbon costs and benefits of Indonesian rainforest conversion to plantations

(2018) Thomas Guillaume et al.   Nature Communications

Where less may be more: how the rare biosphere pulls ecosystems strings

(2017) Alexandre Jousset et al.   ISME Journal

Conversion of rainforest into agroforestry and monoculture plantation in China: Consequences for soil phosphorus forms and microbial community

(2017) Jinchuang Wang et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Seasonal variations in the soil amino acid pool and flux following the conversion of a natural forest to a pine plantation on the eastern Tibetan Plateau, China

(2017) Ziliang Zhang et al.   SOIL BIOLOGY & BIOCHEMISTRY

Effectiveness of elevated CO 2 mediating bacterial communities in the soybean rhizosphere depends on genotypes

(2016) Zhenhua Yu et al.   AGRICULTURE ECOSYSTEMS & ENVIRONMENT

Rainforest Conversion to Rubber Plantation May Not Result in Lower Soil Diversity of Bacteria, Fungi, and Nematodes

(2016) Dorsaf Kerfahi et al.   MICROBIAL ECOLOGY

Long lasting effects of the conversion from natural forest to poplar plantation on soil microbial communities

(2016) Francesco Vitali et al.   MICROBIOLOGICAL RESEARCH

The impact of tropical forest logging and oil palm agriculture on the soil microbiome

(2016) Binu M. Tripathi et al.   MOLECULAR ECOLOGY

Response of soil microbial community to afforestation with pure and mixed species

(2016) Anna Gunina et al.   PLANT AND SOIL

Soil bacterial community dynamics reflect changes in plant community and soil properties during the secondary succession of abandoned farmland in the Loess Plateau

(2016) Chao Zhang et al.   SOIL BIOLOGY & BIOCHEMISTRY

Microbes as Engines of Ecosystem Function: When Does Community Structure Enhance Predictions of Ecosystem Processes?

(2016) Emily B. Graham et al.   Frontiers in Microbiology

Carbon and nitrogen additions induce distinct priming effects along an organic-matter decay continuum

(2016) Na Qiao et al.   Scientific Reports

Impact of tropical lowland rainforest conversion into rubber and oil palm plantations on soil microbial communities

(2015) Valentyna Krashevska et al.   BIOLOGY AND FERTILITY OF SOILS

The application of ecological stoichiometry to plant–microbial–soil organic matter transformations

(2015) Sophie Zechmeister-Boltenstern et al.   ECOLOGICAL MONOGRAPHS

Losses of soil carbon by converting tropical forest to plantations: erosion and decomposition estimated byδ13C

(2015) Thomas Guillaume et al.   GLOBAL CHANGE BIOLOGY

Soil-Borne Microbiome: Linking Diversity to Function

(2015) Lucas W. Mendes et al.   MICROBIAL ECOLOGY

Soil organic matter quantity and quality shape microbial community compositions of subtropical broadleaved forests

(2015) Junjun Ding et al.   MOLECULAR ECOLOGY

Soil Nitrogen-Cycling Responses to Conversion of Lowland Forests to Oil Palm and Rubber Plantations in Sumatra, Indonesia

(2015) Kara Allen et al.   PLoS One

Loss of labile organic carbon from subsoil due to land-use changes in subtropical China

(2015) Hao Sheng et al.   SOIL BIOLOGY & BIOCHEMISTRY

In Silico Analysis of the Metabolic Potential and Niche Specialization of Candidate Phylum "Latescibacteria" (WS3)

(2015) Noha H. Youssef et al.   PLoS One

Vegetation-Associated Impacts on Arctic Tundra Bacterial and Microeukaryotic Communities

(2014) Yu Shi et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Bacterial community structure and soil properties of a subarctic tundra soil in Council, Alaska

(2014) Hye Min Kim et al.   FEMS MICROBIOLOGY ECOLOGY

The assessment of the impact of oil palm and rubber plantations on the biotic and abiotic properties of tropical peat swamp soil in Indonesia

(2014) Yuana Nurulita et al.   International Journal of Agricultural Sustainability

The soil carbon/nitrogen ratio and moisture affect microbial community structures in alkaline permafrost-affected soils with different vegetation types on the Tibetan plateau

(2014) Xinfang Zhang et al.   RESEARCH IN MICROBIOLOGY

Intensive rubber cultivation degrades soil nematode communities in Xishuangbanna, southwest China

(2014) Hai F. Xiao et al.   SOIL BIOLOGY & BIOCHEMISTRY

pH is a good predictor of the distribution of anoxygenic purple phototrophic bacteria in Arctic soils

(2014) Youzhi Feng et al.   SOIL BIOLOGY & BIOCHEMISTRY

Phosphorus Dynamics in the Conversion of a Secondary Forest Into a Rubber Tree Plantation in the Amazon Rainforest

(2014) Adônis Moreira et al.   SOIL SCIENCE

Responses of labile soil organic carbon and enzyme activity in mineral soils to forest conversion in the subtropics

(2013) Qingkui Wang et al.   ANNALS OF FOREST SCIENCE

Impact of Logging and Forest Conversion to Oil Palm Plantations on Soil Bacterial Communities in Borneo

(2013) Larisa Lee-Cruz et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Tree species influence on microbial communities in litter and soil: Current knowledge and research needs

(2013) Cindy E. Prescott et al.   FOREST ECOLOGY AND MANAGEMENT

Temporal metatranscriptomic patterning in phototrophic Chloroflexi inhabiting a microbial mat in a geothermal spring

(2013) Christian G Klatt et al.   ISME Journal

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

Reconstructing the Microbial Diversity and Function of Pre-Agricultural Tallgrass Prairie Soils in the United States

(2013) N. Fierer et al.   SCIENCE

Tropical Soil Bacterial Communities in Malaysia: pH Dominates in the Equatorial Tropics Too

(2012) Binu M. Tripathi et al.   MICROBIAL ECOLOGY

Effects of condensed tannins in conifer leaves on the composition and activity of the soil microbial community in a tropical montane forest

(2012) Masayuki Ushio et al.   PLANT AND SOIL

Distinct Soil Bacterial Communities Revealed under a Diversely Managed Agroecosystem

(2012) Raymon S. Shange et al.   PLoS One

Conversion of the Amazon rainforest to agriculture results in biotic homogenization of soil bacterial communities

(2012) J. L. M. Rodrigues et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Temporal dynamics of microbial communities on decomposing leaf litter of 10 plant species in relation to decomposition rate

(2012) Sarah R. Bray et al.   SOIL BIOLOGY & BIOCHEMISTRY

Response of soil microbial diversity to land-use conversion of natural forests to plantations in a subtropical mountainous area of southern China

(2012) Yongjie Yu et al.   SOIL SCIENCE AND PLANT NUTRITION

Ecological Aspects of the Distribution of Different Autotrophic CO2Fixation Pathways

(2011) Ivan A. Berg   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

Aggregate dynamics and associated soil organic matter contents as influenced by prolonged arable cropping in the South African Highveld

(2011) Ingo Lobe et al.   GEODERMA

Effects of Arbuscular Mycorrhizal Fungi Communities on Soil Quality and the Growth of Cucumber Seedlings in a Greenhouse Soil of Continuously Planting Cucumber

(2011) Yan LI et al.   PEDOSPHERE

Soil moisture is the major factor influencing microbial community structure and enzyme activities across seven biogeoclimatic zones in western Canada

(2011) Beth F.T. Brockett et al.   SOIL BIOLOGY & BIOCHEMISTRY

Changes in soil P chemistry as affected by conversion of natural secondary forests to larch plantations

(2010) Kai Yang et al.   FOREST ECOLOGY AND MANAGEMENT

Molecular diversity of fungal communities in agricultural soils from Lower Austria

(2010) Sylvia Klaubauf et al.   FUNGAL DIVERSITY

Change in Bacterial Community Structure in Response to Disturbance of Natural Hardwood and Secondary Coniferous Forest Soils in Central Taiwan

(2010) Yu-Te Lin et al.   MICROBIAL ECOLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

The ecological coherence of high bacterial taxonomic ranks

(2010) Laurent Philippot et al.   NATURE REVIEWS MICROBIOLOGY

Priming effects: Interactions between living and dead organic matter

(2010) Yakov Kuzyakov   SOIL BIOLOGY & BIOCHEMISTRY

The Ultramicrobacterium "Elusimicrobium minutum" gen. nov., sp. nov., the First Cultivated Representative of the Termite Group 1 Phylum

(2009) O. Geissinger et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Pyrosequencing-Based Assessment of Soil pH as a Predictor of Soil Bacterial Community Structure at the Continental Scale

(2009) C. L. Lauber et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The effects of mineral fertilizer and organic manure on soil microbial community and diversity

(2009) Wenhui Zhong et al.   PLANT AND SOIL

Soil biological activity and their seasonal variations in response to long-term application of organic and inorganic fertilizers

(2009) Gaofei Ge et al.   PLANT AND SOIL

Bacteria diversity and microbial biomass in forest, pasture and fallow soils in the southwestern Amazon basin

(2009) Karina Cenciani et al.   REVISTA BRASILEIRA DE CIENCIA DO SOLO

Microbial contributions to climate change through carbon cycle feedbacks

(2008) Richard D Bardgett et al.   ISME Journal

Relative impacts of land-use, management intensity and fertilization upon soil microbial community structure in agricultural systems

(2008) Kamlesh Jangid et al.   SOIL BIOLOGY & BIOCHEMISTRY

Differences in the composition and diversity of bacterial communities from agricultural and forest soils

(2007) Rima Upchurch et al.   SOIL BIOLOGY & BIOCHEMISTRY