Root exudates increase soil respiration and alter microbial community structure in alpine permafrost and active layer soils

Warming-induced permafrost thaw exacerbates tundra soil carbon decomposition mediated by microbial community

(2020) Jiajie Feng et al.   Microbiome

Functional and Structural Responses of Arctic and Alpine Soil Prokaryotic and Fungal Communities Under Freeze-Thaw Cycles of Different Frequencies

(2020) Carla Perez-Mon et al.   Frontiers in Microbiology

DNA Methylation Changes Induced by Cold in Psychrophilic and Psychrotolerant Naganishia Yeast Species

(2020) Benedetta Turchetti et al.   Microorganisms

Temperature impacts community structure and function of phototrophic Chloroflexi and Cyanobacteria in two alkaline hot springs in Yellowstone National Park

(2020) Annastacia C. Bennett et al.   Environmental Microbiology Reports

Temperatures beyond the community optimum promote the dominance of heat-adapted, fast growing and stress resistant bacteria in alpine soils

(2020) Johanna Donhauser et al.   SOIL BIOLOGY & BIOCHEMISTRY

Strong shifts in the structure of microbial communities are associated with increased litter input rather than temperature in high Arctic soils

(2020) Magdalene Adamczyk et al.   SOIL BIOLOGY & BIOCHEMISTRY

Bacterial and protozoan dynamics upon thawing and freezing of an active layer permafrost soil

(2019) Morten Schostag et al.   ISME Journal

Emerging from the ice – fungal communities are diverse and dynamic in earliest soil developmental stages of a receding glacier

(2019) Philipp Dresch et al.   ENVIRONMENTAL MICROBIOLOGY

Dwelling in the deep – strongly increased root growth and rooting depth enhance plant interactions with thawing permafrost soil

(2019) Gesche Blume‐Werry et al.   NEW PHYTOLOGIST

High-Alpine Permafrost and Active-Layer Soil Microbiomes Differ in Their Response to Elevated Temperatures

(2019) Petra Luláková et al.   Frontiers in Microbiology

The Soil Microbiome of GLORIA Mountain Summits in the Swiss Alps

(2019) Magdalene Adamczyk et al.   Frontiers in Microbiology

Higher temporal turnover of soil fungi than bacteria during long-term secondary succession in a semiarid abandoned farmland

(2019) Jie Wang et al.   SOIL & TILLAGE RESEARCH

Plant diversity and density predict belowground diversity and function in an early successional alpine ecosystem

(2018) Dorota L. Porazinska et al.   ECOLOGY

Tracking the fate of fresh carbon in the Arctic tundra: Will shrub expansion alter responses of soil organic matter to warming?

(2018) Laurel M. Lynch et al.   SOIL BIOLOGY & BIOCHEMISTRY

Discrete taxa of saprotrophic fungi respire different ages of carbon from Antarctic soils

(2018) Kevin K. Newsham et al.   Scientific Reports

Accelerated increase in plant species richness on mountain summits is linked to warming

(2018) Manuel J. Steinbauer et al.   NATURE

Dynamics of soil respiration and microbial communities: Interactive controls of temperature and substrate quality

(2018) Rana Shahbaz Ali et al.   SOIL BIOLOGY & BIOCHEMISTRY

Glucose addition increases the magnitude and decreases the age of soil respired carbon in a long-term permafrost incubation study

(2018) Elaine Pegoraro et al.   SOIL BIOLOGY & BIOCHEMISTRY

A decade of irrigation transforms the soil microbiome of a semi-arid pine forest

(2017) Martin Hartmann et al.   MOLECULAR ECOLOGY

Microbial Taxa Distribution Is Associated with Ecological Trophic Cascades along an Elevation Gradient

(2017) Fei Yao et al.   Frontiers in Microbiology

Local Environmental Factors Drive Divergent Grassland Soil Bacterial Communities in the Western Swiss Alps

(2016) Erika Yashiro et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Phylogenetic organization of bacterial activity

(2016) Ember M Morrissey et al.   ISME Journal

Potential sources of microbial colonizers in an initial soil ecosystem after retreat of an alpine glacier

(2016) Thomas Rime et al.   ISME Journal

Assimilation of microbial and plant carbon by active prokaryotic and fungal populations in glacial forefields

(2016) Thomas Rime et al.   SOIL BIOLOGY & BIOCHEMISTRY

Plants Rather than Mineral Fertilization Shape Microbial Community Structure and Functional Potential in Legacy Contaminated Soil

(2016) Jakub Ridl et al.   Frontiers in Microbiology

Cellulose and hemicellulose decomposition by forest soil bacteria proceeds by the action of structurally variable enzymatic systems

(2016) Rubén López-Mondéjar et al.   Scientific Reports

Error filtering, pair assembly and error correction for next-generation sequencing reads

(2015) Robert C. Edgar et al.   BIOINFORMATICS

Prospecting cold deserts of north western Himalayas for microbial diversity and plant growth promoting attributes

(2015) Ajar Nath Yadav et al.   JOURNAL OF BIOSCIENCE AND BIOENGINEERING

Vertical distribution of the soil microbiota along a successional gradient in a glacier forefield

(2015) Thomas Rime et al.   MOLECULAR ECOLOGY

Climate change and the permafrost carbon feedback

(2015) E. A. G. Schuur et al.   NATURE

Psychrophilic fungi from the world's roof

(2015) M. Wang et al.   PERSOONIA

Permafrost microbial community traits and functional diversity indicate low activity at in situ thaw temperatures

(2015) Jessica G. Ernakovich et al.   SOIL BIOLOGY & BIOCHEMISTRY

The effect of warming on the vulnerability of subducted organic carbon in arctic soils

(2015) Petr Čapek et al.   SOIL BIOLOGY & BIOCHEMISTRY

Relationship between soil fungal diversity and temperature in the maritime Antarctic

(2015) Kevin K. Newsham et al.   Nature Climate Change

Mineral protection of soil carbon counteracted by root exudates

(2015) Marco Keiluweit et al.   Nature Climate Change

Soil bacterial community composition altered by increased nutrient availability in Arctic tundra soils

(2014) Akihiro Koyama et al.   Frontiers in Microbiology

Strong coupling of plant and fungal community structure across western Amazonian rainforests

(2013) Kabir G Peay et al.   ISME Journal

Single-cell genomics reveals metabolic strategies for microbial growth and survival in an oligotrophic aquifer

(2013)   MICROBIOLOGY-SGM

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Active microorganisms in soil: Critical review of estimation criteria and approaches

(2013) Evgenia Blagodatskaya et al.   SOIL BIOLOGY & BIOCHEMISTRY

Twenty-five cultures of lichenizing fungi available for experimental studies on symbiotic systems

(2013) Tami R. McDonald et al.   SYMBIOSIS

Controls on soil microbial community stability under climate change

(2013) Franciska T. de Vries et al.   Frontiers in Microbiology

Long-term warming alters the composition of Arctic soil microbial communities

(2012) Julie R. Deslippe et al.   FEMS MICROBIOLOGY ECOLOGY

Fungal communities at the edge: Ecological lessons from high alpine fungi

(2012) S.K. Schmidt et al.   Fungal Ecology

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Recent Plant Diversity Changes on Europe's Mountain Summits

(2012) H. Pauli et al.   SCIENCE

Identification of biomass utilizing bacteria in a carbon-depleted glacier forefield soil by the use of13C DNA stable isotope probing

(2012) Anita Zumsteg et al.   Environmental Microbiology Reports

Heavy-Machinery Traffic Impacts Methane Emissions as Well as Methanogen Abundance and Community Structure in Oxic Forest Soils

(2011) Beat Frey et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

SOM genesis: microbial biomass as a significant source

(2011) Anja Miltner et al.   BIOGEOCHEMISTRY

Growth of saprotrophic fungi and bacteria in soil

(2011) Johannes Rousk et al.   FEMS MICROBIOLOGY ECOLOGY

Pioneering fungi from the Damma glacier forefield in the Swiss Alps can promote granite weathering

(2011) I. BRUNNER et al.   Geobiology

Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradients

(2011) Noah Fierer et al.   ISME Journal

Differential Growth Responses of Soil Bacterial Taxa to Carbon Substrates of Varying Chemical Recalcitrance

(2011) Katherine C. Goldfarb et al.   Frontiers in Microbiology

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Isolation and Partial Characterization of Bacterial Strains on Low Organic Carbon Medium from Soils Fertilized with Different Organic Amendments

(2010) Ilya V. Senechkin et al.   MICROBIAL ECOLOGY

Labile soil carbon inputs mediate the soil microbial community composition and plant residue decomposition rates

(2010) Marie-Anne de Graaff et al.   NEW PHYTOLOGIST

The UNITE database for molecular identification of fungi - recent updates and future perspectives

(2010) Kessy Abarenkov et al.   NEW PHYTOLOGIST

Shifts in bacterial community structure associated with inputs of low molecular weight carbon compounds to soil

(2010) Kathryn G. Eilers et al.   SOIL BIOLOGY & BIOCHEMISTRY

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Mountain soils under a changing climate and land-use

(2009) Frank Hagedorn et al.   BIOGEOCHEMISTRY

The genomic basis of trophic strategy in marine bacteria

(2009) F. M. Lauro et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mechanisms of real and apparent priming effects and their dependence on soil microbial biomass and community structure: critical review

(2008) Е. Blagodatskaya et al.   BIOLOGY AND FERTILITY OF SOILS

Phylogeny and Ecophysiology of Opportunistic “Snow Molds” from a Subalpine Forest Ecosystem

(2008) S. K. Schmidt et al.   MICROBIAL ECOLOGY

Antagonistic and synergistic effects of fungal and bacterial growth in soil after adding different carbon and nitrogen sources

(2008) Sandra Meidute et al.   SOIL BIOLOGY & BIOCHEMISTRY

Upward migration of vascular plants following a climate warming trend in the Alps

(2007) Gilberto Parolo et al.   BASIC AND APPLIED ECOLOGY