Mapping a multiplexed zoo of mRNA expression

Multiplexed Intact-Tissue Transcriptional Analysis at Cellular Resolution

(2016) Emily Lauren Sylwestrak et al.   CELL

Single-molecule RNA detection at depth by hybridization chain reaction and tissue hydrogel embedding and clearing

(2016) Sheel Shah et al.   DEVELOPMENT

Nanoscale imaging of RNA with expansion microscopy

(2016) Fei Chen et al.   NATURE METHODS

Use of Hybridization Chain Reaction-FluorescentIn SituHybridization To Track Gene Expression by Both Partners during Initiation of Symbiosis

(2015) K. Nikolakakis et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Neural crest migration is driven by a few trailblazer cells with a unique molecular signature narrowly confined to the invasive front

(2015) R. McLennan et al.   DEVELOPMENT

In situ DNA-hybridization chain reaction (HCR): a facilitated in situ HCR system for the detection of environmental microorganisms

(2015) Tsuyoshi Yamaguchi et al.   ENVIRONMENTAL MICROBIOLOGY

Expansion microscopy

(2015) F. Chen et al.   SCIENCE

The hybridization chain reaction in the development of ultrasensitive nucleic acid assays

(2015) Juleiha Ikbal et al.   TRAC-TRENDS IN ANALYTICAL CHEMISTRY

Spatio-Temporal Differences in Dystrophin Dynamics at mRNA and Protein Levels Revealed by a Novel FlipTrap Line

(2015) Frederique Ruf-Zamojski et al.   PLoS One

Diagnostic Applications of Nucleic Acid Circuits

(2014) Cheulhee Jung et al.   ACCOUNTS OF CHEMICAL RESEARCH

Next-Generation in Situ Hybridization Chain Reaction: Higher Gain, Lower Cost, Greater Durability

(2014) Harry M. T. Choi et al.   ACS Nano

From Cascaded Catalytic Nucleic Acids to Enzyme–DNA Nanostructures: Controlling Reactivity, Sensing, Logic Operations, and Assembly of Complex Structures

(2014) Fuan Wang et al.   CHEMICAL REVIEWS

Localizing transcripts to single cells suggests an important role of uncultured deltaproteobacteria in the termite gut hydrogen economy

(2013) A. Z. Rosenthal et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

DNA-Mediated Homogeneous Binding Assays for Nucleic Acids and Proteins

(2012) Hongquan Zhang et al.   CHEMICAL REVIEWS

RNAscope

(2011) Fay Wang et al.   JOURNAL OF MOLECULAR DIAGNOSTICS

Programmable in situ amplification for multiplexed imaging of mRNA expression

(2010) Harry M T Choi et al.   NATURE BIOTECHNOLOGY

In situ detection and genotyping of individual mRNA molecules

(2010) Chatarina Larsson et al.   NATURE METHODS

Determination of gene expression patterns using high-throughput RNA in situ hybridization to whole-mount Drosophila embryos

(2009) Richard Weiszmann et al.   Nature Protocols

Imaging individual mRNA molecules using multiple singly labeled probes

(2008) Arjun Raj et al.   NATURE METHODS

An optimized procedure for whole-mount in situ hybridization on mouse embryos and embryoid bodies

(2008) Denis Piette et al.   Nature Protocols

High-resolution in situ hybridization to whole-mount zebrafish embryos

(2007) Christine Thisse et al.   Nature Protocols