The impact of pre- and post-image processing techniques on deep learning frameworks: A comprehensive review for digital pathology image analysis

Pre‐trained convolutional neural networks as feature extractors for diagnosis of breast cancer using histopathology

(2020) Shweta Saxena et al.   INTERNATIONAL JOURNAL OF IMAGING SYSTEMS AND TECHNOLOGY

Utilizing Automated Breast Cancer Detection to Identify Spatial Distributions of Tumor-Infiltrating Lymphocytes in Invasive Breast Cancer

(2020) Han Le et al.   AMERICAN JOURNAL OF PATHOLOGY

Fully automated quantitative assessment of hepatic steatosis in liver transplants

(2020) Massimo Salvi et al.   COMPUTERS IN BIOLOGY AND MEDICINE

Artificial Intelligence-Based Mitosis Detection in Breast Cancer Histopathology Images Using Faster R-CNN and Deep CNNs

(2020) Tahir Mahmood et al.   Journal of Clinical Medicine

Stain Color Adaptive Normalization (SCAN) algorithm: Separation and standardization of histological stains in digital pathology

(2020) Massimo Salvi et al.   COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE

Computer assisted recognition of breast cancer in biopsy images via fusion of nucleus-guided deep convolutional features

(2020) Kalpana George et al.   COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE

GCTI-SN: Geometry-inspired chemical and tissue invariant stain normalization of microscopic medical images

(2020) Anubha Gupta et al.   MEDICAL IMAGE ANALYSIS

Impact of rescanning and normalization on convolutional neural network performance in multi-center, whole-slide classification of prostate cancer

(2020) Zaneta Swiderska-Chadaj et al.   Scientific Reports

Transfer learning based deep CNN for segmentation and detection of mitoses in breast cancer histopathological images

(2019) Noorul Wahab et al.   Microscopy

Breast Cancer Classification from Histopathological Images with Inception Recurrent Residual Convolutional Neural Network

(2019) Md Zahangir Alom et al.   JOURNAL OF DIGITAL IMAGING

Adaptive color deconvolution for histological WSI normalization

(2019) Yushan Zheng et al.   COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE

Weakly supervised mitosis detection in breast histopathology images using concentric loss

(2019) Chao Li et al.   MEDICAL IMAGE ANALYSIS

Deep learning for automatic Gleason pattern classification for grade group determination of prostate biopsies

(2019) Marit Lucas et al.   VIRCHOWS ARCHIV

Automatic discrimination of neoplastic epithelium and stromal response in breast carcinoma

(2019) Massimo Salvi et al.   COMPUTERS IN BIOLOGY AND MEDICINE

A deep learning algorithm for one-step contour aware nuclei segmentation of histopathology images

(2019) Yuxin Cui et al.   MEDICAL & BIOLOGICAL ENGINEERING & COMPUTING

Breast cancer histopathological image classification using a hybrid deep neural network

(2019) Rui Yan et al.   METHODS

Clinical-grade computational pathology using weakly supervised deep learning on whole slide images

(2019) Gabriele Campanella et al.   NATURE MEDICINE

BACH: Grand challenge on breast cancer histology images

(2019) Guilherme Aresta et al.   MEDICAL IMAGE ANALYSIS

Unsupervised method for normalization of hematoxylin-eosin stain in histological images

(2019) Thaína A. Azevedo Tosta et al.   COMPUTERIZED MEDICAL IMAGING AND GRAPHICS

Multi-scale fully convolutional network for gland segmentation using three-class classification

(2019) Huijun Ding et al.   NEUROCOMPUTING

Object Detection With Deep Learning: A Review

(2019) Zhong-Qiu Zhao et al.   IEEE Transactions on Neural Networks and Learning Systems

Automated Gleason Scoring and Tumor Quantification in Prostate Core Needle Biopsy Images Using Deep Neural Networks and Its Comparison with Pathologist-Based Assessment

(2019) Han Suk Ryu et al.   Cancers

Learning to detect lymphocytes in immunohistochemistry with deep learning

(2019) Zaneta Swiderska-Chadaj et al.   MEDICAL IMAGE ANALYSIS

Quantifying the effects of data augmentation and stain color normalization in convolutional neural networks for computational pathology

(2019) David Tellez et al.   MEDICAL IMAGE ANALYSIS

A computer‐aided diagnosis system for differentiation and delineation of malignant regions on whole‐slide prostate histopathology image using spatial statistics and multidimensional DenseNet

(2019) Chiao‐Min Chen et al.   MEDICAL PHYSICS

Integrating deep convolutional neural networks with marker-controlled watershed for overlapping nuclei segmentation in histopathology images

(2019) Lipeng Xie et al.   NEUROCOMPUTING

Deep Learning-Based Gleason Grading of Prostate Cancer From Histopathology Images—Role of Multiscale Decision Aggregation and Data Augmentation

(2019) Davood Karimi et al.   IEEE Journal of Biomedical and Health Informatics

Efficient deep learning model for mitosis detection using breast histopathology images

(2018) Monjoy Saha et al.   COMPUTERIZED MEDICAL IMAGING AND GRAPHICS

Adversarial Stain Transfer for Histopathology Image Analysis

(2018) Aicha Bentaieb et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

Deep learning in mammography and breast histology, an overview and future trends

(2018) Azam Hamidinekoo et al.   MEDICAL IMAGE ANALYSIS

Segmentation of glandular epithelium in colorectal tumours to automatically compartmentalise IHC biomarker quantification: a deep learning approach

(2018) Yves-Rémi Van Eycke et al.   MEDICAL IMAGE ANALYSIS

DeepMitosis: Mitosis detection via deep detection, verification and segmentation networks

(2018) Chao Li et al.   MEDICAL IMAGE ANALYSIS

Detection and Classification of Cancer in Whole Slide Breast Histopathology Images Using Deep Convolutional Networks

(2018) Baris Gecer et al.   PATTERN RECOGNITION

Spatial Organization and Molecular Correlation of Tumor-Infiltrating Lymphocytes Using Deep Learning on Pathology Images

(2018) Joel Saltz et al.   Cell Reports

The Epidemiology of Prostate Cancer

(2018) Claire H. Pernar et al.   Cold Spring Harbor Perspectives in Medicine

Machine Learning Methods for Histopathological Image Analysis

(2018) Daisuke Komura et al.   Computational and Structural Biotechnology Journal

Segmentation of Nuclei in Histopathology Images by deep regression of the distance map

(2018) Peter Naylor et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

A study about color normalization methods for histopathology images

(2018) Santanu Roy et al.   MICRON

Classification and mutation prediction from non–small cell lung cancer histopathology images using deep learning

(2018) Nicolas Coudray et al.   NATURE MEDICINE

Automated Gleason grading of prostate cancer tissue microarrays via deep learning

(2018) Eirini Arvaniti et al.   Scientific Reports

Computational normalization of H&E-stained histological images: Progress, challenges and future potential

(2018) Thaína A. Azevedo Tosta et al.   ARTIFICIAL INTELLIGENCE IN MEDICINE

Patch-based system for Classification of Breast Histology images using deep learning

(2018) Kaushiki Roy et al.   COMPUTERIZED MEDICAL IMAGING AND GRAPHICS

Deep learning for detecting tumour-infiltrating lymphocytes in testicular germ cell tumours

(2018) Nina Linder et al.   JOURNAL OF CLINICAL PATHOLOGY

MILD-Net: Minimal information loss dilated network for gland instance segmentation in colon histology images

(2018) Simon Graham et al.   MEDICAL IMAGE ANALYSIS

Automatic mitosis detection in breast histopathology images using Convolutional Neural Network based deep transfer learning

(2018) K. Sabeena Beevi et al.   Biocybernetics and Biomedical Engineering

Gland Instance Segmentation Using Deep Multichannel Neural Networks

(2017) Yan Xu et al.   IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING

A Dataset and a Technique for Generalized Nuclear Segmentation for Computational Pathology

(2017) Neeraj Kumar et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

DCAN: Deep contour-aware networks for object instance segmentation from histology images

(2017) Hao Chen et al.   MEDICAL IMAGE ANALYSIS

Accurate segmentation of nuclei in pathological images via sparse reconstruction and deep convolutional networks

(2017) Xipeng Pan et al.   NEUROCOMPUTING

Feature extraction from histopathological images based on nucleus-guided convolutional neural network for breast lesion classification

(2017) Yushan Zheng et al.   PATTERN RECOGNITION

Stain Deconvolution Using Statistical Analysis of Multi-Resolution Stain Colour Representation

(2017) Najah Alsubaie et al.   PLoS One

Classification of breast cancer histology images using Convolutional Neural Networks

(2017) Teresa Araújo et al.   PLoS One

Relevance of deep learning to facilitate the diagnosis of HER2 status in breast cancer

(2017) Michel E. Vandenberghe et al.   Scientific Reports

Accurate and reproducible invasive breast cancer detection in whole-slide images: A Deep Learning approach for quantifying tumor extent

(2017) Angel Cruz-Roa et al.   Scientific Reports

Tumor-infiltrating lymphocytes (TILs) are a powerful prognostic marker in patients with triple-negative breast cancer enrolled in the IBCSG phase III randomized clinical trial 22-00

(2016) Giancarlo Pruneri et al.   BREAST CANCER RESEARCH AND TREATMENT

Cancer statistics, 2016

(2016) Rebecca L. Siegel et al.   CA-A CANCER JOURNAL FOR CLINICIANS

Describing the Grade of Prostate Cancer: Consistent Use of Contemporary Terminology Is Now Required

(2016) Anthony Zietman et al.   EUROPEAN UROLOGY

An Automatic Learning-Based Framework for Robust Nucleus Segmentation

(2016) Fuyong Xing et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

Stain Specific Standardization of Whole-Slide Histopathological Images

(2016) Babak Ehteshami Bejnordi et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

Locality Sensitive Deep Learning for Detection and Classification of Nuclei in Routine Colon Cancer Histology Images

(2016) Korsuk Sirinukunwattana et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

AggNet: Deep Learning From Crowds for Mitosis Detection in Breast Cancer Histology Images

(2016) Shadi Albarqouni et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

Structure-Preserving Color Normalization and Sparse Stain Separation for Histological Images

(2016) Abhishek Vahadane et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

Interobserver variability in Gleason histological grading of prostate cancer

(2016) Tayyar A. Ozkan et al.   Scandinavian Journal of Urology

Multi-class texture analysis in colorectal cancer histology

(2016) Jakob Nikolas Kather et al.   Scientific Reports

Deep learning as a tool for increased accuracy and efficiency of histopathological diagnosis

(2016) Geert Litjens et al.   Scientific Reports

Accurate Segmentation of Cervical Cytoplasm and Nuclei Based on Multiscale Convolutional Network and Graph Partitioning

(2015) Youyi Song et al.   IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING

A Complete Color Normalization Approach to Histopathology Images Using Color Cues Computed From Saturation-Weighted Statistics

(2015) Xingyu Li et al.   IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING

Diagnostic Concordance Among Pathologists Interpreting Breast Biopsy Specimens

(2015) Joann G. Elmore et al.   JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION

Breast Cancer Histopathology Image Analysis: A Review

(2014) Mitko Veta et al.   IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING

A Nonlinear Mapping Approach to Stain Normalization in Digital Histopathology Images Using Image-Specific Color Deconvolution

(2014) Adnan Mujahid Khan et al.   IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING

Prognostic Value of Tumor-Infiltrating Lymphocytes in Triple-Negative Breast Cancers From Two Phase III Randomized Adjuvant Breast Cancer Trials: ECOG 2197 and ECOG 1199

(2014) Sylvia Adams et al.   JOURNAL OF CLINICAL ONCOLOGY

Selective Search for Object Recognition

(2013) J. R. R. Uijlings et al.   INTERNATIONAL JOURNAL OF COMPUTER VISION

The proportion of tumor-stroma as a strong prognosticator for stage II and III colon cancer patients: validation in the VICTOR trial

(2012) A. Huijbers et al.   ANNALS OF ONCOLOGY

Digitally adjusting chromogenic dye proportions in brightfield microscopy images

(2012) C.C. BILGIN et al.   JOURNAL OF MICROSCOPY

Interobserver and intraobserver reproducibility in digital and routine microscopic assessment of prostate needle biopsies

(2010) Paula A. Rodriguez-Urrego et al.   HUMAN PATHOLOGY

Worldwide Variations in Colorectal Cancer

(2009) M. M. Center et al.   CA-A CANCER JOURNAL FOR CLINICIANS

Computer-Aided Detection and Diagnosis of Breast Cancer With Mammography: Recent Advances

(2009) Jinshan Tang et al.   IEEE TRANSACTIONS ON INFORMATION TECHNOLOGY IN BIOMEDICINE

A systematic analysis of performance measures for classification tasks

(2009) Marina Sokolova et al.   INFORMATION PROCESSING & MANAGEMENT