Graph embedding ensemble methods based on the heterogeneous network for lncRNA-miRNA interaction prediction

A network embedding-based multiple information integration method for the MiRNA-disease association prediction

(2019) Yuchong Gong et al.   BMC BIOINFORMATICS

SFLLN: A sparse feature learning ensemble method with linear neighborhood regularization for predicting drug–drug interactions

(2019) Wen Zhang et al.   INFORMATION SCIENCES

LncRNA-miRNA interaction prediction through sequence-derived linear neighborhood propagation method with information combination

(2019) Wen Zhang et al.   BMC GENOMICS

Modeling polypharmacy side effects with graph convolutional networks

(2018) Marinka Zitnik et al.   BIOINFORMATICS

SFPEL-LPI: Sequence-based feature projection ensemble learning for predicting LncRNA-protein interactions

(2018) Wen Zhang et al.   PLoS Computational Biology

Predicting protein–protein interactions from protein sequences by a stacked sparse autoencoder deep neural network

(2017) Yan-Bin Wang et al.   Molecular BioSystems

A Positive Feedback Loop of lncRNA- PVT1 and FOXM1 Facilitates Gastric Cancer Growth and Invasion

(2016) Mi-die Xu et al.   CLINICAL CANCER RESEARCH

Predicting drug side effects by multi-label learning and ensemble learning

(2015) Wen Zhang et al.   BMC BIOINFORMATICS

Drug–target interaction prediction: databases, web servers and computational models

(2015) Xing Chen et al.   BRIEFINGS IN BIOINFORMATICS

Deep learning

(2015) Yann LeCun et al.   NATURE

Noncoding RNA and its associated proteins as regulatory elements of the immune system

(2014) Martin Turner et al.   NATURE IMMUNOLOGY

lncRNASNP: a database of SNPs in lncRNAs and their potential functions in human and mouse

(2014) Jing Gong et al.   NUCLEIC ACIDS RESEARCH

Functional interactions among microRNAs and long noncoding RNAs

(2014) Je-Hyun Yoon et al.   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

The oestrogen receptor alpha-regulated lncRNA NEAT1 is a critical modulator of prostate cancer

(2014) Dimple Chakravarty et al.   Nature Communications

Evf2 (Dlx6as) lncRNA regulates ultraconserved enhancer methylation and the differential transcriptional control of adjacent genes

(2013) E. G. Berghoff et al.   DEVELOPMENT

Long non-coding RNAs: new players in cell differentiation and development

(2013) Alessandro Fatica et al.   NATURE REVIEWS GENETICS

LncRNA loc285194 is a p53-regulated tumor suppressor

(2013) Qian Liu et al.   NUCLEIC ACIDS RESEARCH

Computational Prediction of Conformational B-Cell Epitopes from Antigen Primary Structures by Ensemble Learning

(2012) Wen Zhang et al.   PLoS One

MiR-106a inhibits glioma cell growth by targeting E2F1 independent of p53 status

(2011) Guang Yang et al.   JOURNAL OF MOLECULAR MEDICINE-JMM

A Review of Ensemble Methods in Bioinformatics

(2010) Pengyi Yang et al.   Current Bioinformatics

Detection of miR-106a in gastric carcinoma and its clinical significance

(2008) Bingxiu Xiao et al.   CLINICA CHIMICA ACTA

An Analysis of Human MicroRNA and Disease Associations

(2008) Ming Lu et al.   PLoS One