Comparative analysis of morphological and molecular approaches integrated into the study of the dinoflagellate biodiversity within the recently deposited Black Sea sediments – benefits and drawbacks

Biodiversity between sand grains: Meiofauna composition across southern and western Sweden assessed by metabarcoding

(2020) Sarah Atherton et al.   Biodiversity Data Journal

Toxic HAB species from the Sea of Okhotsk detected by a metagenetic approach, seasonality and environmental drivers

(2019) Sirje Sildever et al.   HARMFUL ALGAE

Molecular methods for cost-efficient monitoring of HAB (harmful algal bloom) dinoflagellate resting cysts

(2018) F. Perini et al.   MARINE POLLUTION BULLETIN

Mapping distribution of cysts of recent dinoflagellate and Cochlodinium polykrikoides using next-generation sequencing and morphological approaches in South Sea, Korea

(2018) Seung Won Jung et al.   Scientific Reports

Biodiversity of phytoplankton cyst assemblages in surface sediments of the Black Sea based on metabarcoding

(2018) Nina Dzhembekova et al.   BIOTECHNOLOGY & BIOTECHNOLOGICAL EQUIPMENT

Applicability of massively parallel sequencing on monitoring harmful algae at Varna Bay in the Black Sea

(2017) Nina Dzhembekova et al.   HARMFUL ALGAE

Comparison of morphological and next generation DNA sequencing methods for assessing zooplankton assemblages

(2017) Julio B.J. Harvey et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

Atlas of modern dinoflagellate cyst distributions in the Black Sea Corridor: from Aegean to Aral Seas, including Marmara, Black, Azov and Caspian Seas

(2017) Peta J. Mudie et al.   MARINE MICROPALEONTOLOGY

Plankton resting stages in recent sediments of Haifa port, Israel (Eastern Mediterranean) - Distribution, viability and potential environmental consequences

(2017) Fernando Rubino et al.   MARINE POLLUTION BULLETIN

Assessment of the metabarcoding approach for community analysis of benthic-epiphytic dinoflagellates using mock communities

(2017) Kirsty F. Smith et al.   NEW ZEALAND JOURNAL OF MARINE AND FRESHWATER RESEARCH

Evaluation of metagenetic community analysis of planktonic copepods using Illumina MiSeq: Comparisons with morphological classification and metagenetic analysis using Roche 454

(2017) Junya Hirai et al.   PLoS One

Diverse seed banks favour adaptation of microalgal populations to future climate conditions

(2015) Anke Kremp et al.   ENVIRONMENTAL MICROBIOLOGY

Depth shapes α- and β-diversities of microbial eukaryotes in surficial sediments of coastal ecosystems

(2015) Jun Gong et al.   ENVIRONMENTAL MICROBIOLOGY

Marine biodiversity and ecosystem function relationships: The potential for practical monitoring applications

(2015) James Asa Strong et al.   ESTUARINE COASTAL AND SHELF SCIENCE

Comparative study of the validity of three regions of the 18S-rRNA gene for massively parallel sequencing-based monitoring of the planktonic eukaryote community

(2015) Akifumi S. Tanabe et al.   Molecular Ecology Resources

Metabarcoding vs. morphological identification to assess diatom diversity in environmental studies

(2014) Jonas Zimmermann et al.   Molecular Ecology Resources

Alexandrium fundyense cysts in the Gulf of Maine: Long-term time series of abundance and distribution, and linkages to past and future blooms

(2013) Donald M. Anderson et al.   DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY

Abundance and distribution of toxic Alexandrium tamarense resting cysts in the sediments of the Chukchi Sea and the eastern Bering Sea

(2013) Masafumi Natsuike et al.   HARMFUL ALGAE

Studies on dinoflagellate cyst assemblages in two estuarine Mediterranean bays: A useful tool for the discovery and mapping of harmful algal species

(2013) Cecilia T. Satta et al.   HARMFUL ALGAE

Unveiling Distribution Patterns of Freshwater Phytoplankton by a Next Generation Sequencing Based Approach

(2013) Alexander Eiler et al.   PLoS One

The toxic dinoflagellate Cochlodinium polykrikoides (Dinophyceae) produces resting cysts

(2012) Ying Zhong Tang et al.   HARMFUL ALGAE

Morphology and Phylogeny ofProrocentrum texanumsp. nov. (Dinophyceae): A New Toxic Dinoflagellate From the Gulf of Mexico Coastal Waters Exhibiting Two Distinct Morphologies

(2012) Darren W. Henrichs et al.   JOURNAL OF PHYCOLOGY

Buried alive – germination of up to a century-old marine protist resting stages

(2011) Nina Lundholm et al.   PHYCOLOGIA

Phytoplankton growth after a century of dormancy illuminates past resilience to catastrophic darkness

(2011) Sofia Ribeiro et al.   Nature Communications

First record of Lingulodinium polyedrum (Dinophyceae) resting cysts in coastal sediments from the Inner Sea of Chiloé, Los Lagos Region, southern Chile (~41°-43°S)

(2011) Pablo Salgado et al.   GAYANA BOTANICA

Preservation, origin and genetic imprint of extracellular DNA in permanently anoxic deep-sea sediments

(2010) C. CORINALDESI et al.   MOLECULAR ECOLOGY

Detection of microalgal resting cysts in European coastal sediments using a PCR-based assay

(2009) Antonella Penna et al.   DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY

Dinoflagellate cysts from surface sediments of Syracuse Bay (Western Ionian Sea, Mediterranean)

(2009) Fernando Rubino et al.   DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY

Diversity predicts stability and resource use efficiency in natural phytoplankton communities

(2008) Robert Ptacnik et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA